RNA–Protein interactions for RNA: ENST00000371219.2

RBM38-204, Transcript of RNA binding motif protein 38, human

TSL 2 BASIC

Gene RBM38, Length 760 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM38-204	ENST00000371219	ACTL8	Q9H568	366 aa		13.97	□□□□□ -0.17
RBM38-204	ENST00000371219	LYRM4	Q9HD34	91 aa		13.97	□□□□□ -0.17
RBM38-204	ENST00000371219	SLC22A11	Q9NSA0	550 aa		13.97	□□□□□ -0.17
RBM38-204	ENST00000371219	AHSP	Q9NZD4	102 aa		13.97	□□□□□ -0.17
RBM38-204	ENST00000371219	HAO1	Q9UJM8	370 aa		13.97	□□□□□ -0.17
RBM38-204	ENST00000371219	TCFL5	Q9UL49	500 aa		13.97	□□□□□ -0.17
RBM38-204	ENST00000371219	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	13.97	□□□□□ -0.17
RBM38-204	ENST00000371219	MRPS2	Q9Y399	296 aa	Known RBP	13.97	□□□□□ -0.17
RBM38-204	ENST00000371219	NPIPB8	E9PQR5	432 aa		13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	FFAR3	O14843	346 aa		13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	KLF11	O14901	512 aa		13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	AZIN1	O14977	448 aa		13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	GPR42	O15529	346 aa		13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	B3GALT2	O43825	422 aa		13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	RDH16	O75452	317 aa		13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	CREG1	O75629	220 aa		13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	KLF7	O75840	302 aa	Predicted RBP	13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	IGHE	P01854	428 aa		13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	STATH	P02808	62 aa		13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	NEFH	P12036	1026 aa		13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	RNH1	P13489	461 aa	Known RBP	13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	HIST1H1T	P22492	207 aa	Predicted RBP	13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	JAK1	P23458	1154 aa		13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	OR1D4	P47884	311 aa		13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	RAP1GDS1	P52306	607 aa		13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	RPS13	P62277	151 aa	Known RBP	13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	PPP2R2A	P63151	447 aa		13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	CHI3L2	Q15782	390 aa		13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	NKG7	Q16617	165 aa		13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	KANK2	Q63ZY3	851 aa		13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	ATG16L1	Q676U5	607 aa		13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	PAGE2	Q7Z2X7	111 aa		13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	TRIM46	Q7Z4K8	759 aa		13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	C7orf57	Q8NEG2	295 aa		13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	NAF1	Q96HR8	494 aa	Known RBP	13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	VPS50	Q96JG6	964 aa		13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	CNTNAP3B	Q96NU0	1288 aa		13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	QRFPR	Q96P65	431 aa		13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	DCBLD2	Q96PD2	775 aa		13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	SPSB2	Q99619	263 aa		13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	CNTNAP3	Q9BZ76	1288 aa		13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	KLHL31	Q9H511	634 aa		13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	PFDN4	Q9NQP4	134 aa		13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	TRPC4	Q9UBN4	977 aa		13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	CTSF	Q9UBX1	484 aa		13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	ZMIZ1	Q9ULJ6	1067 aa		13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	FARSA	Q9Y285	508 aa	Known RBP	13.96	□□□□□ -0.17
RBM38-204	ENST00000371219	CACNA1G	O43497	2377 aa		13.96	□□□□□ -0.18
RBM38-204	ENST00000371219	MGA	Q8IWI9	3026 aa		13.96	□□□□□ -0.18
RBM38-204	ENST00000371219	SCN2A	Q99250	2005 aa		13.95	□□□□□ -0.18
RBM38-204	ENST00000371219	SGK494	L7N484	410 aa		13.95	□□□□□ -0.18
RBM38-204	ENST00000371219	PLPP1	O14494	284 aa		13.95	□□□□□ -0.18
RBM38-204	ENST00000371219	TGFB1	P01137	390 aa		13.95	□□□□□ -0.18
RBM38-204	ENST00000371219	PDYN	P01213	254 aa		13.95	□□□□□ -0.18
RBM38-204	ENST00000371219	ZGLP1	P0C6A0	271 aa		13.95	□□□□□ -0.18
RBM38-204	ENST00000371219	NR1D1	P20393	614 aa		13.95	□□□□□ -0.18
RBM38-204	ENST00000371219	FOLR3	P41439	243 aa		13.95	□□□□□ -0.18
RBM38-204	ENST00000371219	SSR2	P43308	183 aa		13.95	□□□□□ -0.18
RBM38-204	ENST00000371219	PLA2G16	P53816	162 aa		13.95	□□□□□ -0.18
RBM38-204	ENST00000371219	RAB8A	P61006	207 aa		13.95	□□□□□ -0.18
RBM38-204	ENST00000371219	ABCE1	P61221	599 aa	Known RBP	13.95	□□□□□ -0.18
RBM38-204	ENST00000371219	UGT8	Q16880	541 aa		13.95	□□□□□ -0.18
RBM38-204	ENST00000371219	AP5B1	Q2VPB7	878 aa		13.95	□□□□□ -0.18
RBM38-204	ENST00000371219	SPIN4	Q56A73	249 aa		13.95	□□□□□ -0.18
RBM38-204	ENST00000371219	LCN10	Q6JVE6	187 aa		13.95	□□□□□ -0.18
RBM38-204	ENST00000371219	FAM199X	Q6PEV8	388 aa	Predicted RBP	13.95	□□□□□ -0.18
RBM38-204	ENST00000371219	CCDC81	Q6ZN84	652 aa		13.95	□□□□□ -0.18
RBM38-204	ENST00000371219	ZCCHC23	Q6ZST2	131 aa		13.95	□□□□□ -0.18
RBM38-204	ENST00000371219	PRSS41	Q7RTY9	318 aa		13.95	□□□□□ -0.18
RBM38-204	ENST00000371219	VASH2	Q86V25	355 aa		13.95	□□□□□ -0.18
RBM38-204	ENST00000371219	NUDT13	Q86X67	352 aa		13.95	□□□□□ -0.18
RBM38-204	ENST00000371219	CLYBL	Q8N0X4	340 aa		13.95	□□□□□ -0.18
RBM38-204	ENST00000371219	METTL27	Q8N6F8	245 aa	Predicted RBP	13.95	□□□□□ -0.18
RBM38-204	ENST00000371219	OR51Q1	Q8NH59	317 aa		13.95	□□□□□ -0.18
RBM38-204	ENST00000371219	STT3B	Q8TCJ2	826 aa		13.95	□□□□□ -0.18
RBM38-204	ENST00000371219	MIEF2	Q96C03	454 aa		13.95	□□□□□ -0.18
RBM38-204	ENST00000371219	CATSPER2	Q96P56	530 aa		13.95	□□□□□ -0.18
RBM38-204	ENST00000371219	F2RL3	Q96RI0	385 aa		13.95	□□□□□ -0.18
RBM38-204	ENST00000371219	OR51B5	Q9H339	312 aa		13.95	□□□□□ -0.18
RBM38-204	ENST00000371219	DDX31	Q9H8H2	851 aa	Known RBP	13.95	□□□□□ -0.18
RBM38-204	ENST00000371219	PRM3	Q9NNZ6	103 aa		13.95	□□□□□ -0.18
RBM38-204	ENST00000371219	PRDM7	Q9NQW5	492 aa		13.95	□□□□□ -0.18
RBM38-204	ENST00000371219	SEMA3G	Q9NS98	782 aa		13.95	□□□□□ -0.18
RBM38-204	ENST00000371219	MS4A12	Q9NXJ0	267 aa		13.95	□□□□□ -0.18
RBM38-204	ENST00000371219	VPS29	Q9UBQ0	182 aa		13.95	□□□□□ -0.18
RBM38-204	ENST00000371219	MAU2	Q9Y6X3	613 aa		13.95	□□□□□ -0.18
RBM38-204	ENST00000371219	SPACA6	W5XKT8	324 aa		13.95	□□□□□ -0.18
RBM38-204	ENST00000371219	ITPR1	Q14643	2758 aa		13.94	□□□□□ -0.18
RBM38-204	ENST00000371219		A0A1W2PQ72	361 aa		13.94	□□□□□ -0.18
RBM38-204	ENST00000371219	SRRM3	A6NNA2	597 aa	Predicted RBP	13.94	□□□□□ -0.18
RBM38-204	ENST00000371219	C4orf51	C9J302	202 aa		13.94	□□□□□ -0.18
RBM38-204	ENST00000371219		K7ENP7	123 aa		13.94	□□□□□ -0.18
RBM38-204	ENST00000371219	PSMD12	O00232	456 aa	Predicted RBP	13.94	□□□□□ -0.18
RBM38-204	ENST00000371219	RSL1D1	O76021	490 aa	Known RBP	13.94	□□□□□ -0.18
RBM38-204	ENST00000371219	BMP10	O95393	424 aa		13.94	□□□□□ -0.18
RBM38-204	ENST00000371219	HSPA4L	O95757	839 aa		13.94	□□□□□ -0.18
RBM38-204	ENST00000371219	CHRNG	P07510	517 aa		13.94	□□□□□ -0.18
RBM38-204	ENST00000371219	PRPH2	P23942	346 aa		13.94	□□□□□ -0.18
RBM38-204	ENST00000371219	ATP5A1	P25705	553 aa	Known RBP	13.94	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms