RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 NDUFS1P28331 727 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 CRABP2P29373 138 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 FEN1P39748 380 aaKnown RBP6.73□□□□□ -1.33
USP1-202ENST00000371146 ETV5P41161 510 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 ARHGDIBP52566 201 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 ALDH18A1P54886 795 aaKnown RBP6.73□□□□□ -1.33
USP1-202ENST00000371146 E2F1Q01094 437 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 CHRNEQ04844 493 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 EEF1A2Q05639 463 aaKnown RBP6.73□□□□□ -1.33
USP1-202ENST00000371146 TCEAL1Q15170 157 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 TGFBIQ15582 683 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 BROXQ5VW32 411 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 SHEQ5VZ18 495 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 HLA-DQA1Q5Y7H0 255 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 KCTD11Q693B1 232 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 WASH2PQ6VEQ5 465 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 TMEM64Q6YI46 380 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 AGGF1Q8N302 714 aaeCLIP6.73□□□□□ -1.33
USP1-202ENST00000371146 NLGN4YQ8NFZ3 816 aaPredicted RBP6.73□□□□□ -1.33
USP1-202ENST00000371146 SEC16BQ96JE7 1060 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 RBBP8Q99708 897 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 MCMBPQ9BTE3 642 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 FRMD8Q9BZ67 464 aaPredicted RBP6.73□□□□□ -1.33
USP1-202ENST00000371146 IFT22Q9H7X7 185 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 NSMCE4AQ9NXX6 385 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 PTGFRNQ9P2B2 879 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 KCNN3Q9UGI6 736 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 HEBP2Q9Y5Z4 205 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 CACNA1DQ01668 2161 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 ARID1AO14497 2285 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 ICMTO60725 284 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 MYO1DO94832 1006 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 FAM87AP0C7U9 286 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 MLNP12872 115 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 GSSP48637 474 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 BTBD16Q32M84 506 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 ZNF528Q3MIS6 628 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 METRNLQ641Q3 311 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 C16orf54Q6UWD8 224 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 TMPRSS7Q7RTY8 843 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 TMEM156Q8N614 296 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 PPWD1Q96BP3 646 aaKnown RBP6.73□□□□□ -1.33
USP1-202ENST00000371146 LOXL4Q96JB6 756 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 BBS4Q96RK4 519 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 LAMP5Q9UJQ1 280 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 DHRS7Q9Y394 339 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 RNF11Q9Y3C5 154 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 POLR3HQ9Y535 204 aaPredicted RBP6.73□□□□□ -1.33
USP1-202ENST00000371146 PTGDR2Q9Y5Y4 395 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 SPACA6W5XKT8 324 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 DCHS1Q96JQ0 3298 aa6.73□□□□□ -1.33
USP1-202ENST00000371146 COL4A4P53420 1690 aaPredicted RBP6.73□□□□□ -1.33
USP1-202ENST00000371146 GMNCA6NCL1 334 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 TMEM233B4DJY2 109 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 SLC30A4O14863 429 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 LDB3O75112 727 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 PRKRAO75569 313 aaKnown RBP6.72□□□□□ -1.33
USP1-202ENST00000371146 ECDO95905 644 aaPredicted RBP6.72□□□□□ -1.33
USP1-202ENST00000371146 RPS2P15880 293 aaKnown RBP6.72□□□□□ -1.33
USP1-202ENST00000371146 IVDP26440 423 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 ARNTP27540 789 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 PRLHRP49683 370 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 ABHD18Q0P651 414 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 KCNAB2Q13303 367 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 TOR1AIP1Q5JTV8 583 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 ANKRD26P1Q6NSI1 321 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 PWWP2BQ6NUJ5 590 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 DRICH1Q6PGQ1 229 aaPredicted RBP6.72□□□□□ -1.33
USP1-202ENST00000371146 TRMT10CQ7L0Y3 403 aaKnown RBP6.72□□□□□ -1.33
USP1-202ENST00000371146 SPRED1Q7Z699 444 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 TMEM135Q86UB9 458 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 KRT78Q8N1N4 520 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 ANKS4BQ8N8V4 417 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 LILRB4Q8NHJ6 448 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 CD200R1Q8TD46 325 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 DNAJC9Q8WXX5 260 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 SLC9A6Q92581 669 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 NEIL2Q969S2 332 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 ZC3H10Q96K80 434 aaKnown RBP6.72□□□□□ -1.33
USP1-202ENST00000371146 STMN4Q9H169 189 aaPredicted RBP6.72□□□□□ -1.33
USP1-202ENST00000371146 ADAP2Q9NPF8 381 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 TNFRSF10DQ9UBN6 386 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 IL17BQ9UHF5 180 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 SLC17A4Q9Y2C5 497 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 HEMK1Q9Y5R4 338 aaPredicted RBP6.72□□□□□ -1.33
USP1-202ENST00000371146 MIA3Q5JRA6 1907 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 D6RAR5 112 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 H0YGG7 62 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 ULK1O75385 1050 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 PDE9AO76083 593 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 SOD1P00441 154 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 KLK1P06870 262 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 CAPN1P07384 714 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 RBP1P09455 135 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 ALOX5P09917 674 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 OGNP20774 298 aaKnown RBP6.72□□□□□ -1.33
USP1-202ENST00000371146 NUDT1P36639 197 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 SERPINB9P50453 376 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 ARF3P61204 181 aaPredicted RBP6.72□□□□□ -1.33
USP1-202ENST00000371146 SSTP61278 116 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms