RNA–Protein interactions for RNA: ENST00000370086.7

SSR4-203, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR4, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-203ENST00000370086 CNTFP26441 200 aa13.6□□□□□ -0.23
SSR4-203ENST00000370086 UQCRFS1P47985 274 aa13.6□□□□□ -0.23
SSR4-203ENST00000370086 PLA2G16P53816 162 aa13.6□□□□□ -0.23
SSR4-203ENST00000370086 ALDH18A1P54886 795 aaKnown RBP13.6□□□□□ -0.23
SSR4-203ENST00000370086 HIST2H2ACQ16777 129 aaPredicted RBP13.6□□□□□ -0.23
SSR4-203ENST00000370086 BTBD16Q32M84 506 aa13.6□□□□□ -0.23
SSR4-203ENST00000370086 PLAG1Q6DJT9 500 aa13.6□□□□□ -0.23
SSR4-203ENST00000370086 HIST2H2AA3Q6FI13 130 aa13.6□□□□□ -0.23
SSR4-203ENST00000370086 PAPD4Q6PIY7 484 aaKnown RBP13.6□□□□□ -0.23
SSR4-203ENST00000370086 QSOX2Q6ZRP7 698 aa13.6□□□□□ -0.23
SSR4-203ENST00000370086 TRMT10CQ7L0Y3 403 aaKnown RBP13.6□□□□□ -0.23
SSR4-203ENST00000370086 TAOK1Q7L7X3 1001 aa13.6□□□□□ -0.23
SSR4-203ENST00000370086 GSPT2Q8IYD1 628 aaKnown RBP13.6□□□□□ -0.23
SSR4-203ENST00000370086 LAS2Q8IYD9 372 aa13.6□□□□□ -0.23
SSR4-203ENST00000370086 IQCKQ8N0W5 287 aa13.6□□□□□ -0.23
SSR4-203ENST00000370086 EFCAB3Q8N7B9 438 aa13.6□□□□□ -0.23
SSR4-203ENST00000370086 OR2L5Q8NG80 312 aa13.6□□□□□ -0.23
SSR4-203ENST00000370086 FAR2Q96K12 515 aa13.6□□□□□ -0.23
SSR4-203ENST00000370086 PTCHD1Q96NR3 888 aa13.6□□□□□ -0.23
SSR4-203ENST00000370086 F2RL3Q96RI0 385 aa13.6□□□□□ -0.23
SSR4-203ENST00000370086 TXLNGYQ9BZA5 131 aa13.6□□□□□ -0.23
SSR4-203ENST00000370086 NECTIN3Q9NQS3 549 aa13.6□□□□□ -0.23
SSR4-203ENST00000370086 PLA2G3Q9NZ20 509 aa13.6□□□□□ -0.23
SSR4-203ENST00000370086 MAP10Q9P2G4 905 aa13.6□□□□□ -0.23
SSR4-203ENST00000370086 CPSF2Q9P2I0 782 aaKnown RBP13.6□□□□□ -0.23
SSR4-203ENST00000370086 NTNG1Q9Y2I2 539 aa13.6□□□□□ -0.23
SSR4-203ENST00000370086 PCDHGA10Q9Y5H3 936 aa13.6□□□□□ -0.23
SSR4-203ENST00000370086 FLNCQ14315 2725 aa13.59□□□□□ -0.23
SSR4-203ENST00000370086 EXOC1LA0A1B0GW35 172 aa13.59□□□□□ -0.23
SSR4-203ENST00000370086 E2F3O00716 465 aa13.59□□□□□ -0.23
SSR4-203ENST00000370086 PRMT3O60678 531 aa13.59□□□□□ -0.23
SSR4-203ENST00000370086 VPS4BO75351 444 aa13.59□□□□□ -0.23
SSR4-203ENST00000370086 KRT38O76015 456 aa13.59□□□□□ -0.23
SSR4-203ENST00000370086 SIX3O95343 332 aaPredicted RBP13.59□□□□□ -0.23
SSR4-203ENST00000370086 ABHD2P08910 425 aa13.59□□□□□ -0.23
SSR4-203ENST00000370086 MAOAP21397 527 aa13.59□□□□□ -0.23
SSR4-203ENST00000370086 GNLYP22749 145 aa13.59□□□□□ -0.23
SSR4-203ENST00000370086 OR4D2P58180 307 aa13.59□□□□□ -0.23
SSR4-203ENST00000370086 SRSF1Q07955 248 aaKnown RBP eCLIP13.59□□□□□ -0.23
SSR4-203ENST00000370086 ACTN3Q08043 901 aaPredicted RBP13.59□□□□□ -0.23
SSR4-203ENST00000370086 PCBP2Q15366 365 aaKnown RBP eCLIP13.59□□□□□ -0.23
SSR4-203ENST00000370086 GRHL2Q6ISB3 625 aa13.59□□□□□ -0.23
SSR4-203ENST00000370086 H3F3CQ6NXT2 135 aa13.59□□□□□ -0.23
SSR4-203ENST00000370086 MED27Q6P2C8 311 aa13.59□□□□□ -0.23
SSR4-203ENST00000370086 TRIM40Q6P9F5 258 aa13.59□□□□□ -0.23
SSR4-203ENST00000370086 ABHD17CQ6PCB6 329 aa13.59□□□□□ -0.23
SSR4-203ENST00000370086 UBE3DQ7Z6J8 389 aa13.59□□□□□ -0.23
SSR4-203ENST00000370086 ATCAYQ86WG3 371 aa13.59□□□□□ -0.23
SSR4-203ENST00000370086 RNF175Q8N4F7 328 aa13.59□□□□□ -0.23
SSR4-203ENST00000370086 GALNT11Q8NCW6 608 aa13.59□□□□□ -0.23
SSR4-203ENST00000370086 TMEM52Q8NDY8 209 aa13.59□□□□□ -0.23
SSR4-203ENST00000370086 OR7G3Q8NG95 312 aa13.59□□□□□ -0.23
SSR4-203ENST00000370086 M1APQ8TC57 530 aa13.59□□□□□ -0.23
SSR4-203ENST00000370086 ZNF473Q8WTR7 871 aaKnown RBP13.59□□□□□ -0.23
SSR4-203ENST00000370086 CNDP1Q96KN2 507 aa13.59□□□□□ -0.23
SSR4-203ENST00000370086 NPLQ9BXD5 320 aaPredicted RBP13.59□□□□□ -0.23
SSR4-203ENST00000370086 MS4A8Q9BY19 250 aa13.59□□□□□ -0.23
SSR4-203ENST00000370086 EPB41L4BQ9H329 900 aa13.59□□□□□ -0.23
SSR4-203ENST00000370086 L2HGDHQ9H9P8 463 aa13.59□□□□□ -0.23
SSR4-203ENST00000370086 PRDM7Q9NQW5 492 aa13.59□□□□□ -0.23
SSR4-203ENST00000370086 ASF1BQ9NVP2 202 aa13.59□□□□□ -0.23
SSR4-203ENST00000370086 VPS4AQ9UN37 437 aa13.59□□□□□ -0.23
SSR4-203ENST00000370086 ANGPTL3Q9Y5C1 460 aa13.59□□□□□ -0.23
SSR4-203ENST00000370086 CNTRLQ7Z7A1 2325 aa13.59□□□□□ -0.23
SSR4-203ENST00000370086 IGKV3D-11A0A0A0MRZ8 115 aa13.58□□□□□ -0.24
SSR4-203ENST00000370086 TCP11X1B4DZS4 312 aa13.58□□□□□ -0.24
SSR4-203ENST00000370086 PSMD12O00232 456 aaPredicted RBP13.58□□□□□ -0.24
SSR4-203ENST00000370086 SH3BGRLO75368 114 aa13.58□□□□□ -0.24
SSR4-203ENST00000370086 F10P00742 488 aa13.58□□□□□ -0.24
SSR4-203ENST00000370086 TGFB1P01137 390 aa13.58□□□□□ -0.24
SSR4-203ENST00000370086 SNRPAP09012 282 aaKnown RBP13.58□□□□□ -0.24
SSR4-203ENST00000370086 MYBL2P10244 700 aa13.58□□□□□ -0.24
SSR4-203ENST00000370086 PCNAP12004 261 aa13.58□□□□□ -0.24
SSR4-203ENST00000370086 COL6A2P12110 1019 aa13.58□□□□□ -0.24
SSR4-203ENST00000370086 CERS1P27544 350 aa13.58□□□□□ -0.24
SSR4-203ENST00000370086 HNRNPFP52597 415 aaKnown RBP13.58□□□□□ -0.24
SSR4-203ENST00000370086 AP2B1P63010 937 aa13.58□□□□□ -0.24
SSR4-203ENST00000370086 ARG2P78540 354 aa13.58□□□□□ -0.24
SSR4-203ENST00000370086 GTF2H2Q13888 395 aa13.58□□□□□ -0.24
SSR4-203ENST00000370086 SLC29A2Q14542 456 aa13.58□□□□□ -0.24
SSR4-203ENST00000370086 ZNF169Q14929 603 aaPredicted RBP13.58□□□□□ -0.24
SSR4-203ENST00000370086 EXT1Q16394 746 aa13.58□□□□□ -0.24
SSR4-203ENST00000370086 FCRLBQ6BAA4 426 aa13.58□□□□□ -0.24
SSR4-203ENST00000370086 GTF2H2CQ6P1K8 395 aa13.58□□□□□ -0.24
SSR4-203ENST00000370086 ADGRD1Q6QNK2 874 aa13.58□□□□□ -0.24
SSR4-203ENST00000370086 GOLGA7Q7Z5G4 137 aa13.58□□□□□ -0.24
SSR4-203ENST00000370086 HAS2Q92819 552 aa13.58□□□□□ -0.24
SSR4-203ENST00000370086 SCYL1Q96KG9 808 aa13.58□□□□□ -0.24
SSR4-203ENST00000370086 MAGEB10Q96LZ2 347 aaPredicted RBP13.58□□□□□ -0.24
SSR4-203ENST00000370086 SERINC2Q96SA4 455 aa13.58□□□□□ -0.24
SSR4-203ENST00000370086 LPAR4Q99677 370 aa13.58□□□□□ -0.24
SSR4-203ENST00000370086 PRDM9Q9NQV7 894 aa13.58□□□□□ -0.24
SSR4-203ENST00000370086 XPR1Q9UBH6 696 aa13.58□□□□□ -0.24
SSR4-203ENST00000370086 COPG1Q9Y678 874 aaKnown RBP13.58□□□□□ -0.24
SSR4-203ENST00000370086 COL12A1Q99715 3063 aa13.57□□□□□ -0.24
SSR4-203ENST00000370086 TCRBV16S1A1N1A0A5B0 115 aa13.57□□□□□ -0.24
SSR4-203ENST00000370086 CLEC18AA5D8T8 446 aa13.57□□□□□ -0.24
SSR4-203ENST00000370086 A8MUI8 341 aa13.57□□□□□ -0.24
SSR4-203ENST00000370086 TGFBR3LH3BV60 316 aa13.57□□□□□ -0.24
SSR4-203ENST00000370086 B3GALT2O43825 422 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms