RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 OGFOD3Q6PK18 319 aa16.54■□□□□ 0.24
UBE3D-203ENST00000369747 SPRED1Q7Z699 444 aa16.54■□□□□ 0.24
UBE3D-203ENST00000369747 CALHM3Q86XJ0 350 aa16.54■□□□□ 0.24
UBE3D-203ENST00000369747 TMEM132CQ8N3T6 1108 aa16.54■□□□□ 0.24
UBE3D-203ENST00000369747 C1orf52Q8N6N3 182 aaKnown RBP16.54■□□□□ 0.24
UBE3D-203ENST00000369747 TNIP2Q8NFZ5 429 aa16.54■□□□□ 0.24
UBE3D-203ENST00000369747 OR4E2Q8NGC2 313 aa16.54■□□□□ 0.24
UBE3D-203ENST00000369747 FIG4Q92562 907 aa16.54■□□□□ 0.24
UBE3D-203ENST00000369747 RNF145Q96MT1 663 aa16.54■□□□□ 0.24
UBE3D-203ENST00000369747 TBCDQ9BTW9 1192 aa16.54■□□□□ 0.24
UBE3D-203ENST00000369747 CHID1Q9BWS9 393 aa16.54■□□□□ 0.24
UBE3D-203ENST00000369747 REXO4Q9GZR2 422 aaKnown RBP16.54■□□□□ 0.24
UBE3D-203ENST00000369747 OAZ3Q9UMX2 235 aa16.54■□□□□ 0.24
UBE3D-203ENST00000369747 DYRK1BQ9Y463 629 aa16.54■□□□□ 0.24
UBE3D-203ENST00000369747 DLGAP1O14490 977 aa16.53■□□□□ 0.24
UBE3D-203ENST00000369747 SCN2BO60939 215 aa16.53■□□□□ 0.24
UBE3D-203ENST00000369747 SH3BGRLO75368 114 aa16.53■□□□□ 0.24
UBE3D-203ENST00000369747 PKLRP30613 574 aa16.53■□□□□ 0.24
UBE3D-203ENST00000369747 WNT3P56703 355 aa16.53■□□□□ 0.24
UBE3D-203ENST00000369747 RPS13P62277 151 aaKnown RBP16.53■□□□□ 0.24
UBE3D-203ENST00000369747 TXNL4AP83876 142 aaKnown RBP16.53■□□□□ 0.24
UBE3D-203ENST00000369747 MYBPC1Q00872 1141 aa16.53■□□□□ 0.24
UBE3D-203ENST00000369747 SLBPQ14493 270 aaKnown RBP eCLIP16.53■□□□□ 0.24
UBE3D-203ENST00000369747 ARHGAP19Q14CB8 494 aa16.53■□□□□ 0.24
UBE3D-203ENST00000369747 PLCL1Q15111 1095 aa16.53■□□□□ 0.24
UBE3D-203ENST00000369747 NHSL2Q5HYW2 709 aa16.53■□□□□ 0.24
UBE3D-203ENST00000369747 C6orf132Q5T0Z8 1188 aa16.53■□□□□ 0.24
UBE3D-203ENST00000369747 FOXB2Q5VYV0 432 aa16.53■□□□□ 0.24
UBE3D-203ENST00000369747 SLC9B2Q86UD5 537 aa16.53■□□□□ 0.24
UBE3D-203ENST00000369747 C17orf82Q86X59 251 aaPredicted RBP16.53■□□□□ 0.24
UBE3D-203ENST00000369747 MICU2Q8IYU8 434 aa16.53■□□□□ 0.24
UBE3D-203ENST00000369747 ST13P4Q8IZP2 240 aaPredicted RBP16.53■□□□□ 0.24
UBE3D-203ENST00000369747 GPR156Q8NFN8 814 aa16.53■□□□□ 0.24
UBE3D-203ENST00000369747 CHTF18Q8WVB6 975 aa16.53■□□□□ 0.24
UBE3D-203ENST00000369747 LCN9Q8WX39 176 aa16.53■□□□□ 0.24
UBE3D-203ENST00000369747 GBP5Q96PP8 586 aa16.53■□□□□ 0.24
UBE3D-203ENST00000369747 PRRX2Q99811 253 aa16.53■□□□□ 0.24
UBE3D-203ENST00000369747 C9orf16Q9BUW7 83 aa16.53■□□□□ 0.24
UBE3D-203ENST00000369747 ACAT2Q9BWD1 397 aa16.53■□□□□ 0.24
UBE3D-203ENST00000369747 GEMIN8Q9NWZ8 242 aaKnown RBP16.53■□□□□ 0.24
UBE3D-203ENST00000369747 EP300Q09472 2414 aaPredicted RBP16.53■□□□□ 0.24
UBE3D-203ENST00000369747 FAM220BPB1ANY3 271 aa16.53■□□□□ 0.24
UBE3D-203ENST00000369747 RFXANKO14593 260 aa16.53■□□□□ 0.24
UBE3D-203ENST00000369747 GSTA4O15217 222 aa16.53■□□□□ 0.24
UBE3D-203ENST00000369747 SLC34A2O95436 690 aa16.53■□□□□ 0.24
UBE3D-203ENST00000369747 CER1O95813 267 aa16.53■□□□□ 0.24
UBE3D-203ENST00000369747 RETP07949 1114 aa16.53■□□□□ 0.24
UBE3D-203ENST00000369747 C1GALT1C1LP0DN25 315 aa16.53■□□□□ 0.24
UBE3D-203ENST00000369747 SRSF11Q05519 484 aaKnown RBP16.53■□□□□ 0.24
UBE3D-203ENST00000369747 AMIGO1Q86WK6 493 aa16.53■□□□□ 0.24
UBE3D-203ENST00000369747 CARM1Q86X55 608 aa16.53■□□□□ 0.24
UBE3D-203ENST00000369747 SLC35F3Q8IY50 421 aa16.53■□□□□ 0.24
UBE3D-203ENST00000369747 LAS2Q8IYD9 372 aa16.53■□□□□ 0.24
UBE3D-203ENST00000369747 OR8J2Q8NGG1 315 aa16.53■□□□□ 0.24
UBE3D-203ENST00000369747 ATOH1Q92858 354 aaPredicted RBP16.53■□□□□ 0.24
UBE3D-203ENST00000369747 REPS1Q96D71 796 aa16.53■□□□□ 0.24
UBE3D-203ENST00000369747 EFCAB11Q9BUY7 163 aa16.53■□□□□ 0.24
UBE3D-203ENST00000369747 SPNS1Q9H2V7 528 aa16.53■□□□□ 0.24
UBE3D-203ENST00000369747 EHD1Q9H4M9 534 aa16.53■□□□□ 0.24
UBE3D-203ENST00000369747 CCDC177Q9NQR7 707 aaPredicted RBP16.53■□□□□ 0.24
UBE3D-203ENST00000369747 SPATA7Q9P0W8 599 aa16.53■□□□□ 0.24
UBE3D-203ENST00000369747 A0A1W2PPV9 198 aa16.52■□□□□ 0.23
UBE3D-203ENST00000369747 CXCR6O00574 342 aa16.52■□□□□ 0.23
UBE3D-203ENST00000369747 GMNNO75496 209 aa16.52■□□□□ 0.23
UBE3D-203ENST00000369747 MYO1DO94832 1006 aa16.52■□□□□ 0.23
UBE3D-203ENST00000369747 SMIM18P0DKX4 95 aa16.52■□□□□ 0.23
UBE3D-203ENST00000369747 PSMB5P28074 263 aa16.52■□□□□ 0.23
UBE3D-203ENST00000369747 FASLGP48023 281 aa16.52■□□□□ 0.23
UBE3D-203ENST00000369747 SF3A2Q15428 464 aaKnown RBP16.52■□□□□ 0.23
UBE3D-203ENST00000369747 C14orf28Q4W4Y0 310 aa16.52■□□□□ 0.23
UBE3D-203ENST00000369747 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.52■□□□□ 0.23
UBE3D-203ENST00000369747 TMTC4Q5T4D3 741 aa16.52■□□□□ 0.23
UBE3D-203ENST00000369747 ISLR2Q6UXK2 745 aa16.52■□□□□ 0.23
UBE3D-203ENST00000369747 TMEM26Q6ZUK4 368 aa16.52■□□□□ 0.23
UBE3D-203ENST00000369747 FAM86B1Q8N7N1 296 aa16.52■□□□□ 0.23
UBE3D-203ENST00000369747 OR52E4Q8NGH9 312 aa16.52■□□□□ 0.23
UBE3D-203ENST00000369747 SLC5A11Q8WWX8 675 aa16.52■□□□□ 0.23
UBE3D-203ENST00000369747 SRMSQ9H3Y6 488 aa16.52■□□□□ 0.23
UBE3D-203ENST00000369747 ADGRE2Q9UHX3 823 aa16.52■□□□□ 0.23
UBE3D-203ENST00000369747 PIPSLA2A3N6 862 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 SCELO95171 688 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 RASAL1O95294 804 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 LDLRP01130 860 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 ANXA4P09525 319 aaPredicted RBP16.51■□□□□ 0.23
UBE3D-203ENST00000369747 FAM58BPP0C7Q3 252 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 RAP2AP10114 183 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 COX7A2P14406 83 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 HSD17B2P37059 387 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 TRPC1P48995 793 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 SLC14A1Q13336 389 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 SPIN4Q56A73 249 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 THEMIS2Q5TEJ8 643 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 NXPE4Q6UWF7 544 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 ZNF551Q7Z340 670 aaPredicted RBP16.51■□□□□ 0.23
UBE3D-203ENST00000369747 OR2L8Q8NGY9 312 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 CDC26Q8NHZ8 85 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 FAM120BQ96EK7 910 aaKnown RBP16.51■□□□□ 0.23
UBE3D-203ENST00000369747 SPHK1Q9NYA1 384 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 NLGN3Q9NZ94 848 aa16.51■□□□□ 0.23
UBE3D-203ENST00000369747 ZNF639Q9UID6 485 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms