RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 FCRL5Q96RD9 977 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 FSD1LQ9BXM9 530 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 SMYD2Q9NRG4 433 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 SIDT1Q9NXL6 827 aaKnown RBP6.59□□□□□ -1.35
CSDE1-204ENST00000369530 ASB4Q9Y574 426 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 NCKAP5O14513 1909 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 A0A0A6YYJ9 748 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 A0A0J9YYE9 177 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 METTL15A6NJ78 407 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 AQP12BA6NM10 295 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 SLCO1B7G3V0H7 640 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 MFN2O95140 757 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 TRBC1P01850 177 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 SERPINE1P05121 402 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 SLC2A4P14672 509 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 ZNF3P17036 446 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 RPL10P27635 214 aaKnown RBP6.59□□□□□ -1.35
CSDE1-204ENST00000369530 GGT5P36269 586 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 GBX2P52951 348 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-204ENST00000369530 INSM1Q01101 510 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-204ENST00000369530 SPEM2Q0P670 501 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 SLC13A2Q13183 592 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 PEX6Q13608 980 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 HLA-BQ31612 363 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 ADPRMQ3LIE5 342 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 AFTPHQ6ULP2 937 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 ZNF574Q6ZN55 896 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-204ENST00000369530 SLC26A11Q86WA9 606 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 NUDCD3Q8IVD9 361 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 AQP12AQ8IXF9 295 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 MICU2Q8IYU8 434 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 HIPK4Q8NE63 616 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 TSTD1Q8NFU3 115 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 OR7G3Q8NG95 312 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 OR52K1Q8NGK4 314 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 DNAJA4Q8WW22 397 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-204ENST00000369530 ABCG4Q9H172 646 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 EPS8L2Q9H6S3 715 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 IFT46Q9NQC8 304 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 TREX1Q9NSU2 369 aa6.59□□□□□ -1.35
CSDE1-204ENST00000369530 GMPR2Q9P2T1 348 aaKnown RBP6.59□□□□□ -1.35
CSDE1-204ENST00000369530 FCF1Q9Y324 198 aaKnown RBP6.59□□□□□ -1.35
CSDE1-204ENST00000369530 A0A1B0GWJ7 208 aa6.59□□□□□ -1.36
CSDE1-204ENST00000369530 SH3D21A4FU49 640 aa6.59□□□□□ -1.36
CSDE1-204ENST00000369530 PDZK1P1A8MUH7 402 aa6.59□□□□□ -1.36
CSDE1-204ENST00000369530 F8W036 122 aa6.59□□□□□ -1.36
CSDE1-204ENST00000369530 LDB2O43679 373 aa6.59□□□□□ -1.36
CSDE1-204ENST00000369530 CLN5O75503 358 aa6.59□□□□□ -1.36
CSDE1-204ENST00000369530 ALBP02768 609 aa6.59□□□□□ -1.36
CSDE1-204ENST00000369530 F7P08709 466 aaPredicted RBP6.59□□□□□ -1.36
CSDE1-204ENST00000369530 KITP10721 976 aa6.59□□□□□ -1.36
CSDE1-204ENST00000369530 CYP2A6P11509 494 aaPredicted RBP6.59□□□□□ -1.36
CSDE1-204ENST00000369530 PSKH1P11801 424 aa6.59□□□□□ -1.36
CSDE1-204ENST00000369530 SELLP14151 372 aa6.59□□□□□ -1.36
CSDE1-204ENST00000369530 CNTFP26441 200 aa6.59□□□□□ -1.36
CSDE1-204ENST00000369530 HNF1BP35680 557 aa6.59□□□□□ -1.36
CSDE1-204ENST00000369530 PXNP49023 591 aaPredicted RBP6.59□□□□□ -1.36
CSDE1-204ENST00000369530 EFR3AQ14156 821 aa6.59□□□□□ -1.36
CSDE1-204ENST00000369530 KCNJ11Q14654 390 aa6.59□□□□□ -1.36
CSDE1-204ENST00000369530 ZNF124Q15973 351 aa6.59□□□□□ -1.36
CSDE1-204ENST00000369530 GPAT3Q53EU6 434 aa6.59□□□□□ -1.36
CSDE1-204ENST00000369530 LAMTOR1Q6IAA8 161 aa6.59□□□□□ -1.36
CSDE1-204ENST00000369530 TMEM81Q6P7N7 255 aa6.59□□□□□ -1.36
CSDE1-204ENST00000369530 WASH2PQ6VEQ5 465 aa6.59□□□□□ -1.36
CSDE1-204ENST00000369530 ATG14Q6ZNE5 492 aa6.59□□□□□ -1.36
CSDE1-204ENST00000369530 NAXDQ8IW45 347 aa6.59□□□□□ -1.36
CSDE1-204ENST00000369530 RBFAQ8N0V3 343 aa6.59□□□□□ -1.36
CSDE1-204ENST00000369530 MPP5Q8N3R9 675 aa6.59□□□□□ -1.36
CSDE1-204ENST00000369530 RLN3Q8WXF3 142 aa6.59□□□□□ -1.36
CSDE1-204ENST00000369530 FBXW5Q969U6 566 aa6.59□□□□□ -1.36
CSDE1-204ENST00000369530 KCTD14Q9BQ13 255 aaPredicted RBP6.59□□□□□ -1.36
CSDE1-204ENST00000369530 TPSD1Q9BZJ3 242 aa6.59□□□□□ -1.36
CSDE1-204ENST00000369530 SMOC1Q9H4F8 434 aa6.59□□□□□ -1.36
CSDE1-204ENST00000369530 PRORYQ9H606 182 aa6.59□□□□□ -1.36
CSDE1-204ENST00000369530 LDAHQ9H6V9 325 aa6.59□□□□□ -1.36
CSDE1-204ENST00000369530 MRM3Q9HC36 420 aaKnown RBP6.59□□□□□ -1.36
CSDE1-204ENST00000369530 NLGN3Q9NZ94 848 aa6.59□□□□□ -1.36
CSDE1-204ENST00000369530 CCDC59Q9P031 241 aaKnown RBP6.59□□□□□ -1.36
CSDE1-204ENST00000369530 KLHL42Q9P2K6 505 aa6.59□□□□□ -1.36
CSDE1-204ENST00000369530 PCDHGA7Q9Y5G6 932 aa6.59□□□□□ -1.36
CSDE1-204ENST00000369530 TEX264Q9Y6I9 313 aa6.59□□□□□ -1.36
CSDE1-204ENST00000369530 TTC24A2A3L6 582 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-204ENST00000369530 POM121BA6NF01 834 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 HACD1B0YJ81 288 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 PIAS2O75928 621 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 ZP3P21754 424 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 UQCRC1P31930 480 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 LYSMD4Q5XG99 296 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 TRMT10BQ6PF06 316 aaKnown RBP6.58□□□□□ -1.36
CSDE1-204ENST00000369530 HSD11B1LQ7Z5J1 315 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 DTX1Q86Y01 620 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 SNX29P2Q8IUI4 249 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 ELMO2Q96JJ3 720 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 RPL10LQ96L21 214 aaKnown RBP6.58□□□□□ -1.36
CSDE1-204ENST00000369530 TSNARE1Q96NA8 513 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 SMIM14Q96QK8 99 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 PELOQ9BRX2 385 aaKnown RBP6.58□□□□□ -1.36
CSDE1-204ENST00000369530 LRRC61Q9BV99 259 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 SLC19A3Q9BZV2 496 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 PRM3Q9NNZ6 103 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms