RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 LRRN3E7EW58 273 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 KIAA0513O60268 411 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 KLK1P06870 262 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 ALPIP09923 528 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 PRKACGP22612 351 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 DCTP40126 519 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 SNAP47Q5SQN1 464 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 PRPF38BQ5VTL8 546 aaKnown RBP11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 OR52B6Q8NGF0 335 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 ZBED3Q96IU2 234 aaPredicted RBP11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 RNF208Q9H0X6 261 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 LRRN3Q9H3W5 708 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 ACSL5Q9ULC5 683 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 EDDM13A0A1B0GTR0 161 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 NUAK1O60285 661 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 TBCEQ15813 527 aaPredicted RBP11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 Q8N402 240 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 RFT1Q96AA3 541 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 INTS6Q9UL03 887 aaKnown RBP11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 PCDHGA2Q9Y5H1 932 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 CXCL14O95715 111 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 EFNA1P20827 205 aaPredicted RBP11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 MAP2K4P45985 399 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 LRRTM4Q86VH4 590 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 OPRL1P41146 370 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 RAB2AP61019 212 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 SPRED1Q7Z699 444 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 SUN3Q8TAQ9 357 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 NT5C3BQ969T7 300 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 A3GALT2U3KPV4 340 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 A0A0D9SEW6 157 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 APODP05090 189 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 BMXP51813 675 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 CD83Q01151 205 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 GPR149Q86SP6 731 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 NEIL3Q8TAT5 605 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 AKAP1Q92667 903 aaKnown RBP eCLIP11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 NKIRAS2Q9NYR9 191 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 CNOT2Q9NZN8 540 aaKnown RBP11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 ARVCFO00192 962 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 BCHEP06276 602 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 CTNNB1P35222 781 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 MAP2K3P46734 347 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 FAM171BQ6P995 826 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 CBARPQ8N350 705 aaPredicted RBP11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 ART5Q96L15 291 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 C12orf66Q96MD2 445 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 DNAJC27Q9NZQ0 273 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 HCN2Q9UL51 889 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 IFT52Q9Y366 437 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 ANKRD31Q8N7Z5 1873 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 HCRTO43612 131 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 PEX10O60683 326 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 PRKCGP05129 697 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 CPN2P22792 545 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 C6orf183Q5T699 404 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 SMARCD3Q6STE5 483 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 SNIP1Q8TAD8 396 aaKnown RBP11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 AHCYL2Q96HN2 611 aaKnown RBP11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 MKKSQ9NPJ1 570 aaPredicted RBP11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 ALPK2Q86TB3 2170 aa11.37□□□□□ -0.59
CDC42BPA-202ENST00000366764 TP73O15350 636 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 DNTTP04053 509 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 GRK6P43250 576 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 ABHD13Q7L211 337 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 OR5P2Q8WZ92 322 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 IKZF2Q9UKS7 526 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 MROH6A6NGR9 719 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 HNRNPA0Q13151 305 aaKnown RBP11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 CHADLQ6NUI6 762 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 TRAM1L1Q8N609 369 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 MEMO1Q9Y316 297 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 MAB21L2Q9Y586 359 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 ZNF831Q5JPB2 1677 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 MYOCOSA0A1B0GUC4 107 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 SCAMP2O15127 329 aaKnown RBP11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 CPNE3O75131 537 aaKnown RBP11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 PFKLP17858 780 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 OXTRP30559 389 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 FBXO42Q6P3S6 717 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 AMIGO3Q86WK7 504 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 WNK3Q9BYP7 1800 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 OR1I1O60431 355 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 OPN1SWP03999 348 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 ALPLP05186 524 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 PTPN2P17706 415 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 AMD1P17707 334 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 SOX4Q06945 474 aaPredicted RBP11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 LINGO2Q7L985 606 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 NTMT1Q9BV86 223 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 IRF2BPLQ9H1B7 796 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 IL36AQ9UHA7 158 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 ARID2Q68CP9 1835 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 DNAJC25-GNG10A0A024R161 153 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 C6orf47O95873 294 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 ZNF26P17031 533 aaPredicted RBP11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 RPS3AP61247 264 aaKnown RBP11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 NCEH1Q6PIU2 408 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 TICAM1Q8IUC6 712 aa11.36□□□□□ -0.59
CDC42BPA-202ENST00000366764 SPARTQ8N0X7 666 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms