RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 CARM1Q86X55 608 aa3.48□□□□□ -1.85
RNU4-28P-201ENST00000364739 TDHQ8IZJ6 230 aa3.48□□□□□ -1.85
RNU4-28P-201ENST00000364739 RHOXF1Q8NHV9 184 aa3.48□□□□□ -1.85
RNU4-28P-201ENST00000364739 RIT1Q92963 219 aa3.48□□□□□ -1.85
RNU4-28P-201ENST00000364739 BSCL2Q96G97 398 aaPredicted RBP3.48□□□□□ -1.85
RNU4-28P-201ENST00000364739 RADILQ96JH8 1075 aa3.48□□□□□ -1.85
RNU4-28P-201ENST00000364739 PCDHB18PQ96TA0 734 aa3.48□□□□□ -1.85
RNU4-28P-201ENST00000364739 LMAN1LQ9HAT1 526 aa3.48□□□□□ -1.85
RNU4-28P-201ENST00000364739 PLEKHA3Q9HB20 300 aa3.48□□□□□ -1.85
RNU4-28P-201ENST00000364739 DBF4Q9UBU7 674 aaPredicted RBP3.48□□□□□ -1.85
RNU4-28P-201ENST00000364739 SWAP70Q9UH65 585 aa3.48□□□□□ -1.85
RNU4-28P-201ENST00000364739 ANAPC5Q9UJX4 755 aa3.48□□□□□ -1.85
RNU4-28P-201ENST00000364739 TSPAN16Q9UKR8 245 aa3.48□□□□□ -1.85
RNU4-28P-201ENST00000364739 AUP1Q9Y679 476 aa3.48□□□□□ -1.85
RNU4-28P-201ENST00000364739 TSPY2A6NKD2 308 aa3.47□□□□□ -1.85
RNU4-28P-201ENST00000364739 ANHXE9PGG2 379 aa3.47□□□□□ -1.85
RNU4-28P-201ENST00000364739 CCDC188H7C350 402 aa3.47□□□□□ -1.85
RNU4-28P-201ENST00000364739 VENTXO95231 258 aa3.47□□□□□ -1.85
RNU4-28P-201ENST00000364739 RENP00797 406 aa3.47□□□□□ -1.85
RNU4-28P-201ENST00000364739 ADRA2CP18825 462 aa3.47□□□□□ -1.85
RNU4-28P-201ENST00000364739 ABRQ12979 859 aa3.47□□□□□ -1.85
RNU4-28P-201ENST00000364739 GCKRQ14397 625 aa3.47□□□□□ -1.85
RNU4-28P-201ENST00000364739 GRB14Q14449 540 aa3.47□□□□□ -1.85
RNU4-28P-201ENST00000364739 MAPK11Q15759 364 aa3.47□□□□□ -1.85
RNU4-28P-201ENST00000364739 TMEM44Q2T9K0 475 aa3.47□□□□□ -1.85
RNU4-28P-201ENST00000364739 C15orf52Q6ZUT6 534 aaKnown RBP3.47□□□□□ -1.85
RNU4-28P-201ENST00000364739 FGFRL1Q8N441 504 aa3.47□□□□□ -1.85
RNU4-28P-201ENST00000364739 CSNK1G2-AS1Q8NCQ2 148 aa3.47□□□□□ -1.85
RNU4-28P-201ENST00000364739 SMPDL3AQ92484 453 aa3.47□□□□□ -1.85
RNU4-28P-201ENST00000364739 TNFRSF13CQ96RJ3 184 aa3.47□□□□□ -1.85
RNU4-28P-201ENST00000364739 INTS14Q96SY0 518 aa3.47□□□□□ -1.85
RNU4-28P-201ENST00000364739 HNRNPABQ99729 332 aaKnown RBP3.47□□□□□ -1.85
RNU4-28P-201ENST00000364739 MINDY3Q9H8M7 445 aa3.47□□□□□ -1.85
RNU4-28P-201ENST00000364739 NOCTQ9UK39 431 aaKnown RBP3.47□□□□□ -1.85
RNU4-28P-201ENST00000364739 PRRC2AP48634 2157 aaKnown RBP3.46□□□□□ -1.85
RNU4-28P-201ENST00000364739 IGHV3-16A0A0C4DH30 117 aa3.46□□□□□ -1.86
RNU4-28P-201ENST00000364739 A8MU10 97 aa3.46□□□□□ -1.86
RNU4-28P-201ENST00000364739 TCP10L2B9ZVM9 353 aa3.46□□□□□ -1.86
RNU4-28P-201ENST00000364739 APOA4P06727 396 aa3.46□□□□□ -1.86
RNU4-28P-201ENST00000364739 OR3A1P47881 315 aa3.46□□□□□ -1.86
RNU4-28P-201ENST00000364739 RIDAP52758 137 aaKnown RBP3.46□□□□□ -1.86
RNU4-28P-201ENST00000364739 CAPZA1P52907 286 aa3.46□□□□□ -1.86
RNU4-28P-201ENST00000364739 PEX3P56589 373 aa3.46□□□□□ -1.86
RNU4-28P-201ENST00000364739 KRTAP12-2P59991 146 aa3.46□□□□□ -1.86
RNU4-28P-201ENST00000364739 CNTN1Q12860 1018 aa3.46□□□□□ -1.86
RNU4-28P-201ENST00000364739 FAM182AQ5T1J6 154 aa3.46□□□□□ -1.86
RNU4-28P-201ENST00000364739 SHEQ5VZ18 495 aa3.46□□□□□ -1.86
RNU4-28P-201ENST00000364739 TXNRD3NBQ6F5E7 133 aa3.46□□□□□ -1.86
RNU4-28P-201ENST00000364739 TCEAL6Q6IPX3 200 aa3.46□□□□□ -1.86
RNU4-28P-201ENST00000364739 ZNF770Q6IQ21 691 aaPredicted RBP3.46□□□□□ -1.86
RNU4-28P-201ENST00000364739 KLHL10Q6JEL2 608 aa3.46□□□□□ -1.86
RNU4-28P-201ENST00000364739 TRAT1Q6PIZ9 186 aa3.46□□□□□ -1.86
RNU4-28P-201ENST00000364739 VITQ6UXI7 678 aa3.46□□□□□ -1.86
RNU4-28P-201ENST00000364739 SLFN11Q7Z7L1 901 aa3.46□□□□□ -1.86
RNU4-28P-201ENST00000364739 TSSK2Q96PF2 358 aa3.46□□□□□ -1.86
RNU4-28P-201ENST00000364739 FERMT1Q9BQL6 677 aa3.46□□□□□ -1.86
RNU4-28P-201ENST00000364739 STRADBQ9C0K7 418 aa3.46□□□□□ -1.86
RNU4-28P-201ENST00000364739 UBQLN3Q9H347 655 aa3.46□□□□□ -1.86
RNU4-28P-201ENST00000364739 MOB1AQ9H8S9 216 aa3.46□□□□□ -1.86
RNU4-28P-201ENST00000364739 SH3GLB1Q9Y371 365 aa3.46□□□□□ -1.86
RNU4-28P-201ENST00000364739 ATRXP46100 2492 aa3.45□□□□□ -1.86
RNU4-28P-201ENST00000364739 TRBV5-4A0A0C4DH59 114 aa3.45□□□□□ -1.86
RNU4-28P-201ENST00000364739 ARHGEF37A1IGU5 675 aa3.45□□□□□ -1.86
RNU4-28P-201ENST00000364739 TXNL1O43396 289 aa3.45□□□□□ -1.86
RNU4-28P-201ENST00000364739 SELENOFO60613 162 aa3.45□□□□□ -1.86
RNU4-28P-201ENST00000364739 OR6B1O95007 311 aa3.45□□□□□ -1.86
RNU4-28P-201ENST00000364739 SEMA4FO95754 770 aa3.45□□□□□ -1.86
RNU4-28P-201ENST00000364739 SRD5A2P31213 254 aa3.45□□□□□ -1.86
RNU4-28P-201ENST00000364739 NAGLUP54802 743 aa3.45□□□□□ -1.86
RNU4-28P-201ENST00000364739 BACE1P56817 501 aa3.45□□□□□ -1.86
RNU4-28P-201ENST00000364739 KCTD2Q14681 263 aa3.45□□□□□ -1.86
RNU4-28P-201ENST00000364739 SLC27A4Q6P1M0 643 aa3.45□□□□□ -1.86
RNU4-28P-201ENST00000364739 EMBQ6PCB8 327 aa3.45□□□□□ -1.86
RNU4-28P-201ENST00000364739 MEX3DQ86XN8 651 aaKnown RBP3.45□□□□□ -1.86
RNU4-28P-201ENST00000364739 CREBRFQ8IUR6 639 aa3.45□□□□□ -1.86
RNU4-28P-201ENST00000364739 SMYD1Q8NB12 490 aa3.45□□□□□ -1.86
RNU4-28P-201ENST00000364739 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.45□□□□□ -1.86
RNU4-28P-201ENST00000364739 SAP25Q8TEE9 199 aa3.45□□□□□ -1.86
RNU4-28P-201ENST00000364739 SLC35C1Q96A29 364 aa3.45□□□□□ -1.86
RNU4-28P-201ENST00000364739 PSMB7Q99436 277 aa3.45□□□□□ -1.86
RNU4-28P-201ENST00000364739 INPP5KQ9BT40 448 aa3.45□□□□□ -1.86
RNU4-28P-201ENST00000364739 NACAP1Q9BZK3 213 aa3.45□□□□□ -1.86
RNU4-28P-201ENST00000364739 MTIF3Q9H2K0 278 aaKnown RBP3.45□□□□□ -1.86
RNU4-28P-201ENST00000364739 PFDN4Q9NQP4 134 aa3.45□□□□□ -1.86
RNU4-28P-201ENST00000364739 DEPPQ9NTK1 212 aa3.45□□□□□ -1.86
RNU4-28P-201ENST00000364739 HBS1LQ9Y450 684 aaKnown RBP3.45□□□□□ -1.86
RNU4-28P-201ENST00000364739 A0A087WV48 116 aa3.44□□□□□ -1.86
RNU4-28P-201ENST00000364739 A0A1B0GTH9 108 aa3.44□□□□□ -1.86
RNU4-28P-201ENST00000364739 LOC390937A0A1W2PQ73 354 aa3.44□□□□□ -1.86
RNU4-28P-201ENST00000364739 C5orf52A6NGY3 159 aa3.44□□□□□ -1.86
RNU4-28P-201ENST00000364739 B4GAT1O43505 415 aa3.44□□□□□ -1.86
RNU4-28P-201ENST00000364739 SH3BGRLO75368 114 aa3.44□□□□□ -1.86
RNU4-28P-201ENST00000364739 ANGPTL1O95841 491 aa3.44□□□□□ -1.86
RNU4-28P-201ENST00000364739 MT-ND1P03886 318 aa3.44□□□□□ -1.86
RNU4-28P-201ENST00000364739 RPN1P04843 607 aaKnown RBP3.44□□□□□ -1.86
RNU4-28P-201ENST00000364739 VIMP08670 466 aaKnown RBP3.44□□□□□ -1.86
RNU4-28P-201ENST00000364739 KLK2P20151 261 aa3.44□□□□□ -1.86
RNU4-28P-201ENST00000364739 FCGR2BP31994 310 aaPredicted RBP3.44□□□□□ -1.86
RNU4-28P-201ENST00000364739 FCGR2CP31995 323 aa3.44□□□□□ -1.86
RNU4-28P-201ENST00000364739 OR3A3P47888 321 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms