RNA–Protein interactions for RNA: ENST00000362588.1

RNU4-35P-201, Transcript of RNA, U4 small nuclear 35, pseudogene, humanhuman

BASIC

Gene RNU4-35P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-35P-201ENST00000362588 RPS13P62277 151 aaKnown RBP3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 VSNL1P62760 191 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 FOXK1P85037 733 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 PMP22Q01453 160 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 RHAGQ02094 409 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 SRSF1Q07955 248 aaKnown RBP eCLIP3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 TRAF3Q13114 568 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 AIMP2Q13155 320 aaKnown RBP3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 MRPL49Q13405 166 aaKnown RBP3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 PWP1Q13610 501 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 GTF2H2Q13888 395 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 SLC29A2Q14542 456 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 NAA30Q147X3 362 aaPredicted RBP3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 ABRAXAS2Q15018 415 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 HERC3Q15034 1050 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 SETDB1Q15047 1291 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 ACAP2Q15057 778 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 INPP5JQ15735 1006 aaPredicted RBP3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 CPSF6Q16630 551 aaKnown RBP eCLIP3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 FAM83EQ2M2I3 478 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 BTBD16Q32M84 506 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 GLE1Q53GS7 698 aaKnown RBP3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 TCHHL1Q5QJ38 904 aaPredicted RBP3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 GRHL2Q6ISB3 625 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 GTF2H2CQ6P1K8 395 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 TRIM40Q6P9F5 258 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 TMEM205Q6UW68 189 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 TMIGD1Q6UXZ0 262 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 RIPOR1Q6ZS17 1223 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 ABHD13Q7L211 337 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 NDUFAF7Q7L592 441 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 GOLGA7Q7Z5G4 137 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 CPEB2Q7Z5Q1 589 aaKnown RBP3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 UBE3DQ7Z6J8 389 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 CUZD1Q86UP6 607 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 RELL1Q8IUW5 271 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 OR4N5Q8IXE1 308 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 IFT20Q8IY31 132 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 CYP4X1Q8N118 509 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 KRT78Q8N1N4 520 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 TCAIMQ8N3R3 496 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 KIF2BQ8N4N8 673 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 CISD2Q8N5K1 135 aaKnown RBP3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 TBC1D19Q8N5T2 526 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 TRPV3Q8NET8 790 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 OR7G3Q8NG95 312 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 RHEBL1Q8TAI7 183 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 ZNF473Q8WTR7 871 aaKnown RBP3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 THAP3Q8WTV1 239 aaPredicted RBP3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 MZB1Q8WU39 189 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 UBLCP1Q8WVY7 318 aaPredicted RBP3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 METTL21AQ8WXB1 218 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 UCN3Q969E3 161 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 GAL3ST3Q96A11 431 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 ISL2Q96A47 359 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 MIB2Q96AX9 1013 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 TBC1D20Q96BZ9 403 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 MTFMTQ96DP5 389 aaKnown RBP3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 PTCD3Q96EY7 689 aaKnown RBP3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 SMIM10Q96HG1 83 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 IMMP1LQ96LU5 166 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 PTCHD1Q96NR3 888 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 QRFPRQ96P65 431 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 IP6K3Q96PC2 410 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 HBEGFQ99075 208 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 MTERF1Q99551 399 aaKnown RBP3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 NPAS2Q99743 824 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 MAPKAP1Q9BPZ7 522 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 EFCAB11Q9BUY7 163 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 MS4A8Q9BY19 250 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 HES7Q9BYE0 225 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 TXLNGYQ9BZA5 131 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 FAM129AQ9BZQ8 928 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 TGIF2Q9GZN2 237 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 REXO4Q9GZR2 422 aaKnown RBP3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 LHPPQ9H008 270 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 ILKAPQ9H0C8 392 aaPredicted RBP3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 ZNF700Q9H0M5 742 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 OR51B5Q9H339 312 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 NOL11Q9H8H0 719 aaKnown RBP3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 ANKZF1Q9H8Y5 726 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 ACTR8Q9H981 624 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 CNOT10Q9H9A5 744 aaKnown RBP3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 L2HGDHQ9H9P8 463 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 COPS7BQ9H9Q2 264 aaPredicted RBP3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 ZBTB26Q9HCK0 441 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 SEMA4BQ9NPR2 832 aaPredicted RBP3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 SLAMF7Q9NQ25 335 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 RIC8BQ9NVN3 520 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 ASF1BQ9NVP2 202 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 ANKRD10Q9NXR5 420 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 GPRC5BQ9NZH0 403 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 TMEM216Q9P0N5 145 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 PSMC3IPQ9P2W1 217 aaPredicted RBP3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 ZNF225Q9UK10 706 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 PCTPQ9UKL6 214 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 FBXW2Q9UKT8 454 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 RNF11Q9Y3C5 154 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 ZNF451Q9Y4E5 1061 aa3.27□□□□□ -1.89
RNU4-35P-201ENST00000362588 ANGPTL3Q9Y5C1 460 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms