RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 BCORQ6W2J9 1755 aa15.4■□□□□ 0.06
CLSTN1-201ENST00000361311 NTRK2Q16620 822 aa15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 LRIT3Q3SXY7 679 aa15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 REEP3Q6NUK4 255 aa15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 BTLAQ7Z6A9 289 aa15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 SPAG16Q8N0X2 631 aa15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 C1orf216Q8TAB5 229 aa15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 GGHQ92820 318 aa15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 MAL2Q969L2 176 aa15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 AMBRA1Q9C0C7 1298 aa15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 GPRC5BQ9NZH0 403 aa15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 ZFR2Q9UPR6 939 aaKnown RBP15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 EXOSC1Q9Y3B2 195 aaKnown RBP15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 GLTPD2A6NH11 291 aa15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 CLDN7O95471 211 aa15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 HMGN1P05114 100 aa15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 CD1EP15812 388 aa15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 CAPZA2P47755 286 aa15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 CRISP3P54108 245 aa15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 BTG3Q14201 252 aaPredicted RBP15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 GPR19Q15760 415 aa15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 PLAG1Q6DJT9 500 aa15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 LHFPL3Q86UP9 236 aa15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 BEND7Q8N7W2 519 aaPredicted RBP15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 ATP6V1C2Q8NEY4 427 aa15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 ZBED6CLQ96FA7 236 aaPredicted RBP15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 BRD7Q9NPI1 651 aa15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 AKIP1Q9NQ31 210 aa15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 PCDHGB2Q9Y5G2 931 aa15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 TAF1P21675 1872 aa15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 TRAV19A0A0A6YYK7 116 aa15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 KCNC1P48547 511 aa15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 VARS2Q5ST30 1063 aaKnown RBP15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 BCL2L15Q5TBC7 163 aa15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 ZFP41Q8N8Y5 198 aa15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 OR9Q2Q8NGE9 314 aa15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 UPF1Q92900 1129 aaKnown RBP eCLIP15.39■□□□□ 0.052e-11■■■■■ 33.7
CLSTN1-201ENST00000361311 PSD2Q9BQI7 771 aa15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 CKBP12277 381 aa15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 RACK1P63244 317 aaKnown RBP15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 SLC3A1Q07837 685 aa15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 DSG2Q14126 1118 aa15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 SLBPQ14493 270 aaKnown RBP eCLIP15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 PCBP2Q15366 365 aaKnown RBP eCLIP15.39■□□□□ 0.052e-7■■■■■ 46.2
CLSTN1-201ENST00000361311 DEFB115Q30KQ5 88 aa15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 HSDL2Q6YN16 418 aa15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 RNF44Q7L0R7 432 aa15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 PCSK9Q8NBP7 692 aaKnown RBP15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 RPLP0P6Q8NHW5 317 aa15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 TEX37Q96LM6 180 aa15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 CENPOQ9BU64 300 aa15.39■□□□□ 0.05
CLSTN1-201ENST00000361311 ONECUT3O60422 494 aaPredicted RBP15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 RFPL3O75679 317 aa15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 LAMP2P13473 410 aa15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 OR1D2P34982 312 aa15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 MAPK9P45984 424 aa15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 RBBP4Q09028 425 aa15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 CTU2Q2VPK5 515 aaKnown RBP15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 ARHGAP15Q53QZ3 475 aa15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 Q6ZPB1 254 aaPredicted RBP15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 ZNF438Q7Z4V0 828 aa15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 ARHGAP12Q8IWW6 846 aa15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 PSKH2Q96QS6 385 aa15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 KIAA1522Q9P206 1035 aaPredicted RBP15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 MAU2Q9Y6X3 613 aa15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 LDB2O43679 373 aa15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 APOC3P02656 99 aa15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 CBSLP0DN79 551 aa15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 CBSP35520 551 aa15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 UGT2B10P36537 528 aa15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 LIPAP38571 399 aa15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 SLC36A4Q6YBV0 504 aa15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 UBE2Q1Q7Z7E8 422 aa15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 THOC6Q86W42 341 aaKnown RBP15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 LINC00471Q8N535 108 aa15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 FAM86B1Q8N7N1 296 aa15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 CAMK1GQ96NX5 476 aa15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 HDHD5Q9BXW7 423 aa15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 CCSER2Q9H7U1 834 aa15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 MARK1Q9P0L2 795 aa15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 MTX2O75431 263 aa15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 KLK1P06870 262 aa15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 DAPP51397 102 aa15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 SLC46A3Q7Z3Q1 461 aa15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 GALNT11Q8NCW6 608 aa15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 CEP76Q8TAP6 659 aa15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 GATAD2BQ8WXI9 593 aa15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 IGSF8Q969P0 613 aa15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 GMLQ99445 158 aa15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 ARNT2Q9HBZ2 717 aa15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 PLCL2Q9UPR0 1127 aa15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 SCML2Q9UQR0 700 aa15.38■□□□□ 0.05
CLSTN1-201ENST00000361311 LRP5O75197 1615 aa15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 PCDH17O14917 1159 aa15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 GTF2IRD2BQ6EKJ0 949 aa15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 CNIH2Q6PI25 160 aa15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 GTF2IRD2Q86UP8 949 aa15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 LRR1Q96L50 414 aa15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 CACNG6Q9BXT2 260 aa15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 LTB4R2Q9NPC1 389 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms