RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 GATA5Q9BWX5 397 aaPredicted RBP9.37□□□□□ -0.91
CUX1-203ENST00000360264 KCNJ13O60928 360 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 PSPHP78330 225 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 TMPPEQ6ZT21 453 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 ERN2Q76MJ5 926 aaKnown RBP9.36□□□□□ -0.91
CUX1-203ENST00000360264 HORMAD2Q8N7B1 307 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 LRRC57Q8N9N7 239 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 TSPEARQ8WU66 669 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 SLC5A11Q8WWX8 675 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 MAGED1Q9Y5V3 778 aaPredicted RBP9.36□□□□□ -0.91
CUX1-203ENST00000360264 GNAO1P09471 354 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 MYCLP1P12525 358 aaPredicted RBP9.36□□□□□ -0.91
CUX1-203ENST00000360264 AOC1P19801 751 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 CHRFAM7AQ494W8 412 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 DBF4BQ8NFT6 615 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 OR5L2Q8NGL0 311 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 OR56A3Q8NH54 315 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 TTYH3Q9C0H2 523 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 ZNF700Q9H0M5 742 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 CHD2O14647 1828 aaKnown RBP9.36□□□□□ -0.91
CUX1-203ENST00000360264 SLC19A2O60779 497 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 IFNA1P01562 189 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 MTPNP58546 118 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 ECH1Q13011 328 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 CNKSR3Q6P9H4 555 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 OR52B2Q96RD2 323 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 SLC30A2Q9BRI3 323 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 TMEM248Q9NWD8 314 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 RAC2P15153 192 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 GANABQ14697 944 aaKnown RBP9.36□□□□□ -0.91
CUX1-203ENST00000360264 PPP4R1LQ9P1A2 415 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 A0A0U1RQF3 1178 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 ANKRD66B4E2M5 251 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 OAZ2O95190 189 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 ADH6P28332 368 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 ZNF460Q14592 562 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 FBXL22Q6P050 247 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 SLCO2A1Q92959 643 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 TAMM41Q96BW9 452 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 RAD9AQ99638 391 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 C12orf65Q9H3J6 166 aaKnown RBP9.36□□□□□ -0.91
CUX1-203ENST00000360264 XKR8Q9H6D3 395 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 KCNS2Q9ULS6 477 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 ANKRD28O15084 1053 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 CCND3P30281 292 aaPredicted RBP9.36□□□□□ -0.91
CUX1-203ENST00000360264 MARCH9Q86YJ5 346 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 TRIB2Q92519 343 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 RIPK3Q9Y572 518 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 C6orf47O95873 294 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 GLDCP23378 1020 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 STON2Q8WXE9 905 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 TMEM41AQ96HV5 264 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 TSGA13Q96PP4 275 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 TM9SF2Q99805 663 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 MGAT4BQ9UQ53 548 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 LIPT1Q9Y234 373 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 FXYD6-FXYD2A0A087WZ82 144 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 VSTM2BA6NLU5 285 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 KCNE1P15382 129 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 OXTRP30559 389 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 TLE2Q04725 743 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 TRAM2Q15035 370 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 GTF2IRD2BQ6EKJ0 949 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 S100A7AQ86SG5 101 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 GTF2IRD2Q86UP8 949 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 NTPCRQ9BSD7 190 aaKnown RBP9.36□□□□□ -0.91
CUX1-203ENST00000360264 FXYD6Q9H0Q3 95 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 UNKLQ9H9P5 680 aaKnown RBP9.36□□□□□ -0.91
CUX1-203ENST00000360264 SCML1Q9UN30 329 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 TPST2O60704 377 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 CDK2P24941 298 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 MEDAGQ5VYS4 303 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 POC1BQ8TC44 478 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 MR1Q95460 341 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 SPATA6Q9NWH7 488 aaPredicted RBP9.36□□□□□ -0.91
CUX1-203ENST00000360264 PRKD3O94806 890 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 CSN2P05814 226 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 PABPC4LP0CB38 370 aaKnown RBP9.36□□□□□ -0.91
CUX1-203ENST00000360264 THBS2P35442 1172 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 AFF1P51825 1210 aaKnown RBP9.36□□□□□ -0.91
CUX1-203ENST00000360264 CDK6Q00534 326 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 SLC22A8Q8TCC7 542 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 DCSTAMPQ9H295 470 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 DTLQ9NZJ0 730 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 INSL5Q9Y5Q6 135 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 TMEM14AQ9Y6G1 99 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 PXDNQ92626 1479 aa9.36□□□□□ -0.91
CUX1-203ENST00000360264 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.35□□□□□ -0.91
CUX1-203ENST00000360264 RPS15P62841 145 aaKnown RBP9.35□□□□□ -0.91
CUX1-203ENST00000360264 KIAA0319Q5VV43 1072 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 TNFRSF25Q93038 417 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 RNF19AQ9NV58 838 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 TMEM9Q9P0T7 183 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 MPDZO75970 2070 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 EIF1AYO14602 144 aaKnown RBP9.35□□□□□ -0.91
CUX1-203ENST00000360264 EFNA1P20827 205 aaPredicted RBP9.35□□□□□ -0.91
CUX1-203ENST00000360264 EIF1AXP47813 144 aaKnown RBP9.35□□□□□ -0.91
CUX1-203ENST00000360264 DNAJB13P59910 316 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 DEFA5Q01523 94 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 IL17AQ16552 155 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms