RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 HSD17B2P37059 387 aa13.28□□□□□ -0.28
CSNK1E-201ENST00000359867 ARHGAP19Q14CB8 494 aa13.28□□□□□ -0.28
CSNK1E-201ENST00000359867 PYCR3Q53H96 274 aa13.28□□□□□ -0.28
CSNK1E-201ENST00000359867 OTUD3Q5T2D3 398 aaPredicted RBP13.28□□□□□ -0.28
CSNK1E-201ENST00000359867 LRIF1Q5T3J3 769 aa13.28□□□□□ -0.28
CSNK1E-201ENST00000359867 INTS11Q5TA45 600 aaKnown RBP13.28□□□□□ -0.28
CSNK1E-201ENST00000359867 DHRS4L2Q6PKH6 230 aa13.28□□□□□ -0.28
CSNK1E-201ENST00000359867 KCTD8Q6ZWB6 473 aa13.28□□□□□ -0.28
CSNK1E-201ENST00000359867 ITPKCQ96DU7 683 aa13.28□□□□□ -0.28
CSNK1E-201ENST00000359867 C11orf24Q96F05 449 aaPredicted RBP13.28□□□□□ -0.28
CSNK1E-201ENST00000359867 ITCHQ96J02 903 aa13.28□□□□□ -0.28
CSNK1E-201ENST00000359867 WDR92Q96MX6 357 aa13.28□□□□□ -0.28
CSNK1E-201ENST00000359867 TSSK3Q96PN8 268 aa13.28□□□□□ -0.28
CSNK1E-201ENST00000359867 CARS2Q9HA77 564 aaKnown RBP13.28□□□□□ -0.28
CSNK1E-201ENST00000359867 CCDC177Q9NQR7 707 aaPredicted RBP13.28□□□□□ -0.28
CSNK1E-201ENST00000359867 VAPAQ9P0L0 249 aa13.28□□□□□ -0.28
CSNK1E-201ENST00000359867 ASF1AQ9Y294 204 aa13.28□□□□□ -0.28
CSNK1E-201ENST00000359867 NEUROG3Q9Y4Z2 214 aa13.28□□□□□ -0.28
CSNK1E-201ENST00000359867 A0A096LPI6 279 aa13.27□□□□□ -0.28
CSNK1E-201ENST00000359867 FOXE1O00358 373 aaPredicted RBP13.27□□□□□ -0.28
CSNK1E-201ENST00000359867 ACP5P13686 325 aa13.27□□□□□ -0.28
CSNK1E-201ENST00000359867 CDH3P22223 829 aa13.27□□□□□ -0.28
CSNK1E-201ENST00000359867 HTR1BP28222 390 aa13.27□□□□□ -0.28
CSNK1E-201ENST00000359867 DHPSP49366 369 aaPredicted RBP13.27□□□□□ -0.28
CSNK1E-201ENST00000359867 KIAA1024LP59773 190 aa13.27□□□□□ -0.28
CSNK1E-201ENST00000359867 SRSF11Q05519 484 aaKnown RBP13.27□□□□□ -0.28
CSNK1E-201ENST00000359867 ANGPT1Q15389 498 aa13.27□□□□□ -0.28
CSNK1E-201ENST00000359867 HIST2H2ACQ16777 129 aaPredicted RBP13.27□□□□□ -0.28
CSNK1E-201ENST00000359867 RUNDC3AQ59EK9 446 aa13.27□□□□□ -0.28
CSNK1E-201ENST00000359867 HIST2H2AA3Q6FI13 130 aa13.27□□□□□ -0.28
CSNK1E-201ENST00000359867 TBPL2Q6SJ96 375 aa13.27□□□□□ -0.28
CSNK1E-201ENST00000359867 LAS2Q8IYD9 372 aa13.27□□□□□ -0.28
CSNK1E-201ENST00000359867 CLHC1Q8NHS4 586 aa13.27□□□□□ -0.28
CSNK1E-201ENST00000359867 TFGQ92734 400 aaPredicted RBP13.27□□□□□ -0.28
CSNK1E-201ENST00000359867 CENPNQ96H22 339 aaPredicted RBP13.27□□□□□ -0.28
CSNK1E-201ENST00000359867 MTERF1Q99551 399 aaKnown RBP13.27□□□□□ -0.28
CSNK1E-201ENST00000359867 C9orf16Q9BUW7 83 aa13.27□□□□□ -0.28
CSNK1E-201ENST00000359867 PCED1AQ9H1Q7 454 aa13.27□□□□□ -0.28
CSNK1E-201ENST00000359867 DUSP15Q9H1R2 295 aaPredicted RBP13.27□□□□□ -0.28
CSNK1E-201ENST00000359867 TM9SF3Q9HD45 589 aa13.27□□□□□ -0.28
CSNK1E-201ENST00000359867 CUL9Q8IWT3 2517 aa13.27□□□□□ -0.28
CSNK1E-201ENST00000359867 TRBV5-3A0A0A0MS03 114 aa13.27□□□□□ -0.29
CSNK1E-201ENST00000359867 TCRBV5S2A0A599 114 aa13.27□□□□□ -0.29
CSNK1E-201ENST00000359867 A6NL46 340 aa13.27□□□□□ -0.29
CSNK1E-201ENST00000359867 J3QRK9 145 aa13.27□□□□□ -0.29
CSNK1E-201ENST00000359867 DFNA5O60443 496 aa13.27□□□□□ -0.29
CSNK1E-201ENST00000359867 TACR1P25103 407 aa13.27□□□□□ -0.29
CSNK1E-201ENST00000359867 ELK4P28324 431 aa13.27□□□□□ -0.29
CSNK1E-201ENST00000359867 POLR2IP36954 125 aaKnown RBP13.27□□□□□ -0.29
CSNK1E-201ENST00000359867 RABIFP47224 123 aa13.27□□□□□ -0.29
CSNK1E-201ENST00000359867 ACSM2AQ08AH3 577 aa13.27□□□□□ -0.29
CSNK1E-201ENST00000359867 SF3B4Q15427 424 aaKnown RBP eCLIP13.27□□□□□ -0.293e-18■■■■□ 21.6
CSNK1E-201ENST00000359867 SPIN4Q56A73 249 aa13.27□□□□□ -0.29
CSNK1E-201ENST00000359867 ACSM2BQ68CK6 577 aa13.27□□□□□ -0.29
CSNK1E-201ENST00000359867 LCTLQ6UWM7 567 aa13.27□□□□□ -0.29
CSNK1E-201ENST00000359867 TMPRSS11BQ86T26 416 aa13.27□□□□□ -0.29
CSNK1E-201ENST00000359867 PAPD5Q8NDF8 572 aaKnown RBP13.27□□□□□ -0.29
CSNK1E-201ENST00000359867 SACM1LQ9NTJ5 587 aa13.27□□□□□ -0.29
CSNK1E-201ENST00000359867 SIRT5Q9NXA8 310 aa13.27□□□□□ -0.29
CSNK1E-201ENST00000359867 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.27□□□□□ -0.29
CSNK1E-201ENST00000359867 FBXO4Q9UKT5 387 aa13.27□□□□□ -0.29
CSNK1E-201ENST00000359867 ACSL5Q9ULC5 683 aa13.27□□□□□ -0.29
CSNK1E-201ENST00000359867 KCNK6Q9Y257 313 aa13.27□□□□□ -0.29
CSNK1E-201ENST00000359867 GPSM3Q9Y4H4 160 aa13.27□□□□□ -0.29
CSNK1E-201ENST00000359867 TDRD6O60522 2096 aaKnown RBP13.27□□□□□ -0.29
CSNK1E-201ENST00000359867 KCNJ13O60928 360 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 ERGP11308 486 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 FCGR1AP12314 374 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 CD38P28907 300 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 YPEL5P62699 121 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 PHC1P78364 1004 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 PLIN5Q00G26 463 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 CYP4F3Q08477 520 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 ALG11Q2TAA5 492 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 NXPE4Q6UWF7 544 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 SYT12Q8IV01 421 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 DHRSXQ8N5I4 330 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 TRPV3Q8NET8 790 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 HUS1BQ8NHY5 278 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 C1orf216Q8TAB5 229 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 CHTF18Q8WVB6 975 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 SLC5A11Q8WWX8 675 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 UBE2E3Q969T4 207 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 KLHDC7BQ96G42 594 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 ZNF583Q96ND8 569 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 CCDC115Q96NT0 180 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 TCEAL2Q9H3H9 227 aaPredicted RBP13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 CARD8Q9Y2G2 431 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 KMT2EQ8IZD2 1858 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 MAGEB17A8MXT2 336 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 RASAL1O95294 804 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 PCNAP12004 261 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 EEF1B2P24534 225 aaKnown RBP13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 NUDT1P36639 197 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 ASMTP46597 345 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 CSNK1EP49674 416 aaKnown RBP13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 OR4D2P58180 307 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 MTPNP58546 118 aa13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 RACK1P63244 317 aaKnown RBP13.26□□□□□ -0.29
CSNK1E-201ENST00000359867 DDX39BQ13838 428 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms