RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 TNFSF15O95150 251 aa11.77□□□□□ -0.53
NIF3L1-201ENST00000359683 SCELO95171 688 aa11.77□□□□□ -0.53
NIF3L1-201ENST00000359683 TROVE2P10155 538 aaKnown RBP eCLIP11.77□□□□□ -0.53
NIF3L1-201ENST00000359683 RAP1GDS1P52306 607 aa11.77□□□□□ -0.53
NIF3L1-201ENST00000359683 NR6A1Q15406 480 aa11.77□□□□□ -0.53
NIF3L1-201ENST00000359683 SMU1Q2TAY7 513 aa11.77□□□□□ -0.53
NIF3L1-201ENST00000359683 AP5B1Q2VPB7 878 aa11.77□□□□□ -0.53
NIF3L1-201ENST00000359683 SLC9B1Q4ZJI4 515 aa11.77□□□□□ -0.53
NIF3L1-201ENST00000359683 RFTN2Q52LD8 501 aaPredicted RBP11.77□□□□□ -0.53
NIF3L1-201ENST00000359683 SPIN4Q56A73 249 aa11.77□□□□□ -0.53
NIF3L1-201ENST00000359683 SPDYAQ5MJ70 313 aa11.77□□□□□ -0.53
NIF3L1-201ENST00000359683 C6orf136Q5SQH8 315 aa11.77□□□□□ -0.53
NIF3L1-201ENST00000359683 NIPAL1Q6NVV3 410 aa11.77□□□□□ -0.53
NIF3L1-201ENST00000359683 GALNT18Q6P9A2 607 aa11.77□□□□□ -0.53
NIF3L1-201ENST00000359683 FOXR1Q6PIV2 292 aa11.77□□□□□ -0.53
NIF3L1-201ENST00000359683 IGF2-ASQ6U949 168 aa11.77□□□□□ -0.53
NIF3L1-201ENST00000359683 TTLL10Q6ZVT0 673 aa11.77□□□□□ -0.53
NIF3L1-201ENST00000359683 ZFAND4Q86XD8 727 aa11.77□□□□□ -0.53
NIF3L1-201ENST00000359683 PDSS2Q86YH6 399 aa11.77□□□□□ -0.53
NIF3L1-201ENST00000359683 SLC38A9Q8NBW4 561 aa11.77□□□□□ -0.53
NIF3L1-201ENST00000359683 ZCCHC10Q8TBK6 192 aa11.77□□□□□ -0.53
NIF3L1-201ENST00000359683 ACTRT2Q8TDY3 377 aa11.77□□□□□ -0.53
NIF3L1-201ENST00000359683 TUBGCP3Q96CW5 907 aa11.77□□□□□ -0.53
NIF3L1-201ENST00000359683 MVB12AQ96EY5 273 aa11.77□□□□□ -0.53
NIF3L1-201ENST00000359683 THOC1Q96FV9 657 aaKnown RBP11.77□□□□□ -0.53
NIF3L1-201ENST00000359683 SLC46A1Q96NT5 459 aa11.77□□□□□ -0.53
NIF3L1-201ENST00000359683 C17orf62Q9BQA9 187 aa11.77□□□□□ -0.53
NIF3L1-201ENST00000359683 SPRY4Q9C004 299 aa11.77□□□□□ -0.53
NIF3L1-201ENST00000359683 ROGDIQ9GZN7 287 aa11.77□□□□□ -0.53
NIF3L1-201ENST00000359683 NRSN2Q9GZP1 204 aa11.77□□□□□ -0.53
NIF3L1-201ENST00000359683 EPN3Q9H201 632 aa11.77□□□□□ -0.53
NIF3L1-201ENST00000359683 ACTR5Q9H9F9 607 aaPredicted RBP11.77□□□□□ -0.53
NIF3L1-201ENST00000359683 ADAM29Q9UKF5 820 aa11.77□□□□□ -0.53
NIF3L1-201ENST00000359683 SCN3AQ9NY46 2000 aa11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 A0A0G2JN53 185 aa11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 DIAPH2O60879 1101 aa11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 SEC22BO75396 215 aa11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 KLHL18O94889 574 aa11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 NSA2O95478 260 aaKnown RBP11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 ONECUT2O95948 504 aa11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 B3GALT4O96024 378 aa11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 NTRK1P04629 796 aa11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 ZNF28P17035 718 aa11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 IL1RNP18510 177 aa11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 HIST1H1TP22492 207 aaPredicted RBP11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 ATP5A1P25705 553 aaKnown RBP11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 EPHA3P29320 983 aa11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 GABREP78334 506 aa11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 BTN3A2P78410 334 aa11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 ACSM2AQ08AH3 577 aa11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 DEFB134Q4QY38 66 aa11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 ATP6AP1LQ52LC2 224 aa11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 TMEM164Q5U3C3 297 aa11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 ACSM2BQ68CK6 577 aa11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 PRMT9Q6P2P2 845 aa11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 ZNF793Q6ZN11 406 aa11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 PRSS41Q7RTY9 318 aa11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 COMMD6Q7Z4G1 85 aa11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 C1orf52Q8N6N3 182 aaKnown RBP11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 AMER3Q8N944 861 aa11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 PROKR1Q8TCW9 393 aa11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 FCRL1Q96LA6 429 aa11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 LRFN5Q96NI6 719 aa11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 EBF4Q9BQW3 602 aa11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 CCDC28BQ9BUN5 200 aa11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 SORBS1Q9BX66 1292 aaKnown RBP11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 CLK4Q9HAZ1 481 aaKnown RBP11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 ANKHQ9HCJ1 492 aa11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 KLHL14Q9P2G3 628 aa11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 DHCR7Q9UBM7 475 aaKnown RBP11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 GIMAP2Q9UG22 337 aa11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 DCTN4Q9UJW0 460 aa11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 CDC14AQ9UNH5 594 aa11.76□□□□□ -0.53
NIF3L1-201ENST00000359683 A0A088AWK7 358 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 A0A0A6YYC8 382 aaPredicted RBP11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 A0A0A6YYD5 115 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 GOLGA8QA0A0J9YX86 632 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 A0A1B0GX78 115 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 GOLGA8OA6NCC3 632 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 GOLGA8NF8WBI6 632 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 H0YIG0 161 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 I3L1I5 382 aaPredicted RBP11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 NVLO15381 856 aaKnown RBP11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 CPNE3O75131 537 aaKnown RBP11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 EEDO75530 441 aaKnown RBP11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 KIAA0754O94854 1291 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 KLK1P06870 262 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 LBPP18428 481 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 ZNF10P21506 573 aaPredicted RBP11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 ALAS2P22557 587 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 TPP2P29144 1249 aaPredicted RBP11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 RORAP35398 523 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 MTTPP55157 894 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 RAE1P78406 368 aaKnown RBP11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 EMX2Q04743 252 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 RTP5Q14D33 572 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 ZNF385CQ66K41 422 aaPredicted RBP11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 OGFOD2Q6N063 350 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 PAGE2Q7Z2X7 111 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 CPLX4Q7Z7G2 160 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms