RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 APOBEC3AP31941 199 aaPredicted RBP1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 GLIPR1P48060 266 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 SLC1A6P48664 564 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 ASCL1P50553 236 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 ZNF135P52742 658 aaPredicted RBP1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 CDH13P55290 713 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 DLK1P80370 383 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 RASGEF1BQ0VAM2 473 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 CNTN1Q12860 1018 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 SCGB2A2Q13296 93 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 ILKQ13418 452 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 TPBGQ13641 420 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 UGT3A2Q3SY77 523 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 MCMDC2Q4G0Z9 681 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 TTMPQ5BVD1 217 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 CCDC122Q5T0U0 273 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 ANKRD26P1Q6NSI1 321 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 GLB1LQ6UWU2 654 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 TMIGD1Q6UXZ0 262 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 GPRIN3Q6ZVF9 776 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 DCP2Q8IU60 420 aaKnown RBP1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 LRRC8AQ8IWT6 810 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 OR2Y1Q8NGV0 311 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 HEXDCQ8WVB3 486 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 MTMR12Q9C0I1 747 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 NXF2Q9GZY0 626 aaKnown RBP1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 LSG1Q9H089 658 aaKnown RBP1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 TREX1Q9NSU2 369 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 TMOD2Q9NZR1 351 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 CFAP97Q9P2B7 532 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 APOBEC3BQ9UH17 382 aaKnown RBP1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 SNX7Q9UNH6 387 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 RPL26L1Q9UNX3 145 aaKnown RBP1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 MRPS17Q9Y2R5 130 aaKnown RBP1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 CMAHPQ9Y471 501 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 CACNG2Q9Y698 323 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 STON1Q9Y6Q2 735 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 DUSP10Q9Y6W6 482 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 ZFC3H1O60293 1989 aaKnown RBP1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 GAKO14976 1311 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 A0A087WZY1 265 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 MYO1GB0I1T2 1018 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 FAM90A26D6RGX4 464 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 RAB27BO00194 218 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 SLC28A1O00337 649 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 MID1O15344 667 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 FAM20BO75063 409 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 C1QL1O75973 258 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 LYPLA2O95372 231 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 GH1P01241 217 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 IL6RP08887 468 aaPredicted RBP1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 UQCRFS1P1P0C7P4 283 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 ERVK-10P10266 1014 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 ODC1P11926 461 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 PEPDP12955 493 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 F3P13726 295 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 PRCPP42785 496 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 PSMD8P48556 350 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 CCL11P51671 97 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 TRAP1Q12931 704 aaKnown RBP1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 TSTA3Q13630 321 aaPredicted RBP1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 DDX39BQ13838 428 aaKnown RBP1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 FASTKQ14296 549 aaKnown RBP1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 BEND3Q5T5X7 828 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 NCR3LG1Q68D85 454 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 CYB5D1Q6P9G0 228 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 C19orf48Q6RUI8 117 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 PAQR6Q6TCH4 344 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 LINGO2Q7L985 606 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 ZNF573Q86YE8 665 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 KIAA2013Q8IYS2 634 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 ADGRF4Q8IZF3 695 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 GPC2Q8N158 579 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 SIX6OS1Q8N1H7 587 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 PNPLA1Q8N8W4 532 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 LPCAT1Q8NF37 534 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 OR4M2Q8NGB6 313 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 AGR3Q8TD06 166 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 C18orf25Q96B23 403 aaPredicted RBP1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 LGALS12Q96DT0 336 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 LURAP1Q96LR2 239 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 C11orf84Q9BUA3 381 aaPredicted RBP1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 LARSQ9P2J5 1176 aaKnown RBP1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 AFF2P51816 1311 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 KMT2AQ03164 3969 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 SVEP1Q4LDE5 3571 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 PLIN4Q96Q06 1357 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 MYOCOSA0A1B0GUC4 107 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 SLC5A10A0PJK1 596 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 CDHR4A6H8M9 788 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 BLOC1S5-TXNDC5H3BN57 136 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 SERPINC1P01008 464 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 CRHP06850 196 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 ATXN1LP0C7T5 689 aaKnown RBP1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 LBPP18428 481 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 NTSR1P30989 418 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 STX2P32856 288 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 MAS1LP35410 378 aa1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 ALDH7A1P49419 539 aaKnown RBP1.71□□□□□ -2.14
SMARCAD1-202ENST00000359052 CSNK1EP49674 416 aaKnown RBP1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms