RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 OIP5O43482 229 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 GTF2F2P13984 249 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 ZNF20P17024 532 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 ADORA2AP29274 412 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 BMP8BP34820 402 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 SNTB2Q13425 540 aaKnown RBP8.48□□□□□ -1.05
COL6A6-201ENST00000358511 BMP8AQ7Z5Y6 402 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 FANK1Q8TC84 345 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 GAL3ST1Q99999 423 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 TAS2R8Q9NYW2 309 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 TEX13CA0A0J9YWL9 993 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 HMX3A6NHT5 357 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 TUBG1P23258 451 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 ITPKBP27987 946 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 CCND3P30281 292 aaPredicted RBP8.48□□□□□ -1.05
COL6A6-201ENST00000358511 NRLP54845 237 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 RHBDL3P58872 404 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 ACTC1P68032 377 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 ACTA1P68133 377 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 ARFRP1Q13795 201 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 PTTG3PQ9NZH4 202 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 ZNF487B1APH4 448 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 SMAD9O15198 467 aaKnown RBP8.48□□□□□ -1.05
COL6A6-201ENST00000358511 LRRTM2O43300 516 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 CBSLP0DN79 551 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 CBSP35520 551 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 ALDH3B2P48448 385 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 ZNF33AQ06730 810 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 BTN1A1Q13410 526 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 SF1Q15637 639 aaKnown RBP8.48□□□□□ -1.05
COL6A6-201ENST00000358511 EXOC3L2Q2M3D2 409 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 POM121L1PQ3SYA9 428 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 SLC36A3Q495N2 470 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 RAB41Q5JT25 222 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 SAMD7Q7Z3H4 446 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 OR6K2Q8NGY2 324 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 NMUR1Q9HB89 426 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 GPR83Q9NYM4 423 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 NUBP2Q9Y5Y2 271 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 ARHGEF15O94989 841 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 ACTA2P62736 377 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 ERVK-25P63136 954 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 ACTG2P63267 376 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 ILF3Q12906 894 aaKnown RBP eCLIP8.48□□□□□ -1.05
COL6A6-201ENST00000358511 ARL14Q8N4G2 192 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 TTLQ8NG68 377 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 NTPCRQ9BSD7 190 aaKnown RBP8.48□□□□□ -1.05
COL6A6-201ENST00000358511 RBCK1Q9BYM8 510 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 FANCFQ9NPI8 374 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 DPP7Q9UHL4 492 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 INTS6Q9UL03 887 aaKnown RBP8.48□□□□□ -1.05
COL6A6-201ENST00000358511 TIAM2Q8IVF5 1701 aa8.48□□□□□ -1.05
COL6A6-201ENST00000358511 A0A1W2PQ67 120 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 TTC34A8MYJ7 566 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 SGCEO43556 437 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 GMFGO60234 142 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 VNN2O95498 520 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 PSEN2P49810 448 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 DUSP4Q13115 394 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 TCEAL6Q6IPX3 200 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 ZC3H3Q8IXZ2 948 aaKnown RBP8.47□□□□□ -1.05
COL6A6-201ENST00000358511 JAGN1Q8N5M9 183 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 OR6C4Q8NGE1 309 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 OR8S1Q8NH09 359 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 PPTC7Q8NI37 304 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 RICTORQ6R327 1708 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 ARPC5O15511 151 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 NIPSNAP2O75323 286 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 ARL2P36404 184 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 MECP2P51608 486 aaKnown RBP8.47□□□□□ -1.05
COL6A6-201ENST00000358511 MRPS6P82932 125 aaKnown RBP8.47□□□□□ -1.05
COL6A6-201ENST00000358511 TXNRD3NBQ6F5E7 133 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 RIT1Q92963 219 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 CPNE2Q96FN4 548 aaPredicted RBP8.47□□□□□ -1.05
COL6A6-201ENST00000358511 C7orf34Q96L11 122 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 SIGLEC10Q96LC7 697 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 FERD3LQ96RJ6 166 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 APOBEC3GQ9HC16 384 aaKnown RBP8.47□□□□□ -1.05
COL6A6-201ENST00000358511 ELOA3DA6NLF2 546 aaPredicted RBP8.47□□□□□ -1.05
COL6A6-201ENST00000358511 SOBPA7XYQ1 873 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 SDHDO14521 159 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 CASP9P55211 416 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 ST3GAL3Q11203 375 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 GRIK2Q13002 908 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 KEAP1Q14145 624 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 MAD2L1BPQ15013 274 aaPredicted RBP8.47□□□□□ -1.05
COL6A6-201ENST00000358511 EIF4HQ15056 248 aaKnown RBP8.47□□□□□ -1.05
COL6A6-201ENST00000358511 ELOA3BQ3SY89 546 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 OR4F3Q6IEY1 312 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 PGAP1Q75T13 922 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 TMCO2Q7Z6W1 182 aaPredicted RBP8.47□□□□□ -1.05
COL6A6-201ENST00000358511 TMEM151AQ8N4L1 468 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 ELOA3Q8NG57 546 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 FAM110BQ8TC76 370 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 FNIP2Q9P278 1114 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 PRSS51A0A1B0GVH4 220 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 MEN1O00255 615 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 SLC33A1O00400 549 aaPredicted RBP8.47□□□□□ -1.05
COL6A6-201ENST00000358511 GMDSO60547 372 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 PRAMEF2O60811 474 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms