RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 TRMT11Q7Z4G4 463 aaKnown RBP13.7□□□□□ -0.22
NIPAL3-203ENST00000358028 PTOV1Q86YD1 416 aa13.7□□□□□ -0.22
NIPAL3-203ENST00000358028 ZNF513Q8N8E2 541 aaPredicted RBP13.7□□□□□ -0.22
NIPAL3-203ENST00000358028 IL17RCQ8NAC3 791 aa13.7□□□□□ -0.22
NIPAL3-203ENST00000358028 GPR156Q8NFN8 814 aa13.7□□□□□ -0.22
NIPAL3-203ENST00000358028 OR10Q1Q8NGQ4 319 aa13.7□□□□□ -0.22
NIPAL3-203ENST00000358028 EFCAB11Q9BUY7 163 aa13.7□□□□□ -0.22
NIPAL3-203ENST00000358028 DYRK4Q9NR20 520 aa13.7□□□□□ -0.22
NIPAL3-203ENST00000358028 SH2B3Q9UQQ2 575 aa13.7□□□□□ -0.22
NIPAL3-203ENST00000358028 TPRKBQ9Y3C4 175 aa13.7□□□□□ -0.22
NIPAL3-203ENST00000358028 MGAT4DA6NG13 374 aa13.69□□□□□ -0.22
NIPAL3-203ENST00000358028 PCDH7O60245 1069 aa13.69□□□□□ -0.22
NIPAL3-203ENST00000358028 POP7O75817 140 aaKnown RBP13.69□□□□□ -0.22
NIPAL3-203ENST00000358028 KLF8O95600 359 aaPredicted RBP13.69□□□□□ -0.22
NIPAL3-203ENST00000358028 C1GALT1C1LP0DN25 315 aa13.69□□□□□ -0.22
NIPAL3-203ENST00000358028 ZNF12P17014 697 aa13.69□□□□□ -0.22
NIPAL3-203ENST00000358028 ZNF8P17098 575 aaPredicted RBP13.69□□□□□ -0.22
NIPAL3-203ENST00000358028 IDSP22304 550 aa13.69□□□□□ -0.22
NIPAL3-203ENST00000358028 PRKACGP22612 351 aa13.69□□□□□ -0.22
NIPAL3-203ENST00000358028 PPP1R8Q12972 351 aaKnown RBP13.69□□□□□ -0.22
NIPAL3-203ENST00000358028 TSTA3Q13630 321 aaPredicted RBP13.69□□□□□ -0.22
NIPAL3-203ENST00000358028 PAGE2BQ5JRK9 111 aa13.69□□□□□ -0.22
NIPAL3-203ENST00000358028 KDM4DQ6B0I6 523 aa13.69□□□□□ -0.22
NIPAL3-203ENST00000358028 CRTC3Q6UUV7 619 aa13.69□□□□□ -0.22
NIPAL3-203ENST00000358028 CBLL1Q75N03 491 aa13.69□□□□□ -0.22
NIPAL3-203ENST00000358028 ERN2Q76MJ5 926 aaKnown RBP13.69□□□□□ -0.22
NIPAL3-203ENST00000358028 ANKRD13BQ86YJ7 626 aa13.69□□□□□ -0.22
NIPAL3-203ENST00000358028 ZNF547Q8IVP9 402 aa13.69□□□□□ -0.22
NIPAL3-203ENST00000358028 LAS2Q8IYD9 372 aa13.69□□□□□ -0.22
NIPAL3-203ENST00000358028 LRRC56Q8IYG6 542 aaPredicted RBP13.69□□□□□ -0.22
NIPAL3-203ENST00000358028 VPS37AQ8NEZ2 397 aa13.69□□□□□ -0.22
NIPAL3-203ENST00000358028 COQ8BQ96D53 544 aa13.69□□□□□ -0.22
NIPAL3-203ENST00000358028 CXorf40BQ96DE9 158 aa13.69□□□□□ -0.22
NIPAL3-203ENST00000358028 APOL4Q9BPW4 351 aa13.69□□□□□ -0.22
NIPAL3-203ENST00000358028 TMEM245Q9H330 911 aa13.69□□□□□ -0.22
NIPAL3-203ENST00000358028 RAD21L1Q9H4I0 556 aa13.69□□□□□ -0.22
NIPAL3-203ENST00000358028 ITM2CQ9NQX7 267 aa13.69□□□□□ -0.22
NIPAL3-203ENST00000358028 SIRT5Q9NXA8 310 aa13.69□□□□□ -0.22
NIPAL3-203ENST00000358028 GPR34Q9UPC5 381 aa13.69□□□□□ -0.22
NIPAL3-203ENST00000358028 ERVK-11Q9UQG0 969 aa13.69□□□□□ -0.22
NIPAL3-203ENST00000358028 FAM186AA6NE01 2351 aa13.69□□□□□ -0.22
NIPAL3-203ENST00000358028 GNG14A0A1W2PPG7 69 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 FOXE1O00358 373 aaPredicted RBP13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 VEGFDO43915 354 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 ADAM23O75077 832 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 JRKO75564 520 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 CLPXO76031 633 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 FKBP9O95302 570 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 ABCB1P08183 1280 aaPredicted RBP13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 EFNA1P20827 205 aaPredicted RBP13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 PCMT1P22061 227 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 RANBP1P43487 201 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 CXCL12P48061 93 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 ITGA1P56199 1179 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 C21orf59P57076 290 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 MRPS21P82921 87 aaKnown RBP13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 TMED1Q13445 227 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 NUDT18Q6ZVK8 323 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 HORMAD1Q86X24 394 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 LMNTD1Q8N9Z9 388 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 BPIFB6Q8NFQ5 453 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 OR2L2Q8NH16 312 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 CXorf40AQ8TE69 158 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 TRUB1Q8WWH5 349 aaKnown RBP13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 SLC5A11Q8WWX8 675 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 FKBP10Q96AY3 582 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 DPEP2Q9H4A9 486 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 EHD1Q9H4M9 534 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 TPT1P8Q9HAU6 139 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 CCNB1IP1Q9NPC3 277 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 DMRT3Q9NQL9 472 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 FAIMQ9NVQ4 179 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 VNN3Q9NY84 501 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 ATP6V1HQ9UI12 483 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 ENPP5Q9UJA9 477 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 B3GNT3Q9Y2A9 372 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 ZNF292O60281 2723 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 C1orf226A1L170 272 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 PIPSLA2A3N6 862 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 ZNF99A8MXY4 864 aaPredicted RBP13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 C1QTNF3-AMACRE9PGA6 284 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 K7ESF4 209 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 ANGPTL1O95841 491 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 TDGF1P13385 188 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 CD247P20963 164 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 ACADLP28330 430 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 WASP42768 502 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 IL5RAQ01344 420 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 CSTF1Q05048 431 aaKnown RBP13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 BNIP3Q12983 259 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 NFE2L1Q14494 772 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 HIST2H2ACQ16777 129 aaPredicted RBP13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 HIST2H2AA3Q6FI13 130 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 GALNT18Q6P9A2 607 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 NXPE4Q6UWF7 544 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 UNC5DQ6UXZ4 953 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 MAMSTRQ6ZN01 415 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 CYP4Z1Q86W10 505 aa13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 MMAAQ8IVH4 418 aaKnown RBP13.68□□□□□ -0.22
NIPAL3-203ENST00000358028 ZC3H7AQ8IWR0 971 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms