RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 RAB15P59190 212 aa24.07■■□□□ 1.44
SSBP3-202ENST00000357475 MUM1Q2TAK8 710 aa24.07■■□□□ 1.44
SSBP3-202ENST00000357475 LSM12Q3MHD2 195 aaKnown RBP24.07■■□□□ 1.44
SSBP3-202ENST00000357475 ATP6AP1LQ52LC2 224 aa24.07■■□□□ 1.44
SSBP3-202ENST00000357475 ZFAND4Q86XD8 727 aa24.07■■□□□ 1.44
SSBP3-202ENST00000357475 DDA1Q9BW61 102 aa24.07■■□□□ 1.44
SSBP3-202ENST00000357475 WASF3Q9UPY6 502 aa24.07■■□□□ 1.44
SSBP3-202ENST00000357475 DLGAP4Q9Y2H0 992 aa24.07■■□□□ 1.44
SSBP3-202ENST00000357475 PCDHB3Q9Y5E6 796 aa24.07■■□□□ 1.44
SSBP3-202ENST00000357475 SEC16AO15027 2179 aa24.06■■□□□ 1.44
SSBP3-202ENST00000357475 URADA6NGE7 173 aa24.06■■□□□ 1.44
SSBP3-202ENST00000357475 TMPRSS11DO60235 418 aa24.06■■□□□ 1.44
SSBP3-202ENST00000357475 TPP2P29144 1249 aaPredicted RBP24.06■■□□□ 1.44
SSBP3-202ENST00000357475 OR1D4P47884 311 aa24.06■■□□□ 1.44
SSBP3-202ENST00000357475 ACSM2AQ08AH3 577 aa24.06■■□□□ 1.44
SSBP3-202ENST00000357475 NDUFA9Q16795 377 aa24.06■■□□□ 1.44
SSBP3-202ENST00000357475 FAM214AQ32MH5 1076 aa24.06■■□□□ 1.44
SSBP3-202ENST00000357475 TMEM198Q66K66 360 aa24.06■■□□□ 1.44
SSBP3-202ENST00000357475 ACSM2BQ68CK6 577 aa24.06■■□□□ 1.44
SSBP3-202ENST00000357475 NXNQ6DKJ4 435 aa24.06■■□□□ 1.44
SSBP3-202ENST00000357475 RHBDD2Q6NTF9 364 aa24.06■■□□□ 1.44
SSBP3-202ENST00000357475 CYB5D1Q6P9G0 228 aa24.06■■□□□ 1.44
SSBP3-202ENST00000357475 CPLX4Q7Z7G2 160 aa24.06■■□□□ 1.44
SSBP3-202ENST00000357475 ACOT4Q8N9L9 421 aa24.06■■□□□ 1.44
SSBP3-202ENST00000357475 C10orf82Q8WW14 230 aa24.06■■□□□ 1.44
SSBP3-202ENST00000357475 CLIP3Q96DZ5 547 aa24.06■■□□□ 1.44
SSBP3-202ENST00000357475 SLC45A3Q96JT2 553 aa24.06■■□□□ 1.44
SSBP3-202ENST00000357475 MARK4Q96L34 752 aa24.06■■□□□ 1.44
SSBP3-202ENST00000357475 PPP3R2Q96LZ3 170 aa24.06■■□□□ 1.44
SSBP3-202ENST00000357475 ULBP3Q9BZM4 244 aa24.06■■□□□ 1.44
SSBP3-202ENST00000357475 AKIRIN1Q9H9L7 192 aaPredicted RBP24.06■■□□□ 1.44
SSBP3-202ENST00000357475 POLR1BQ9H9Y6 1135 aa24.06■■□□□ 1.44
SSBP3-202ENST00000357475 ANKHQ9HCJ1 492 aa24.06■■□□□ 1.44
SSBP3-202ENST00000357475 NMRK1Q9NWW6 199 aa24.06■■□□□ 1.44
SSBP3-202ENST00000357475 KLHL14Q9P2G3 628 aa24.06■■□□□ 1.44
SSBP3-202ENST00000357475 PCDHGA8Q9Y5G5 932 aa24.06■■□□□ 1.44
SSBP3-202ENST00000357475 DSCR3O14972 297 aa24.05■■□□□ 1.44
SSBP3-202ENST00000357475 RDH16O75452 317 aa24.05■■□□□ 1.44
SSBP3-202ENST00000357475 ALDOCP09972 364 aaKnown RBP24.05■■□□□ 1.44
SSBP3-202ENST00000357475 HIST1H1TP22492 207 aaPredicted RBP24.05■■□□□ 1.44
SSBP3-202ENST00000357475 MAT1AQ00266 395 aaKnown RBP24.05■■□□□ 1.44
SSBP3-202ENST00000357475 RUNX2Q13950 521 aa24.05■■□□□ 1.44
SSBP3-202ENST00000357475 FAM53BQ14153 422 aa24.05■■□□□ 1.44
SSBP3-202ENST00000357475 HERC3Q15034 1050 aa24.05■■□□□ 1.44
SSBP3-202ENST00000357475 SYT16Q17RD7 645 aa24.05■■□□□ 1.44
SSBP3-202ENST00000357475 SPIN4Q56A73 249 aa24.05■■□□□ 1.44
SSBP3-202ENST00000357475 LCN10Q6JVE6 187 aa24.05■■□□□ 1.44
SSBP3-202ENST00000357475 CENPKQ9BS16 269 aa24.05■■□□□ 1.44
SSBP3-202ENST00000357475 TBCDQ9BTW9 1192 aa24.05■■□□□ 1.44
SSBP3-202ENST00000357475 SLC7A5P2Q9GIP4 190 aa24.05■■□□□ 1.44
SSBP3-202ENST00000357475 DDX31Q9H8H2 851 aaKnown RBP24.05■■□□□ 1.44
SSBP3-202ENST00000357475 PFDN4Q9NQP4 134 aa24.05■■□□□ 1.44
SSBP3-202ENST00000357475 PCDHGA3Q9Y5H0 932 aa24.05■■□□□ 1.44
SSBP3-202ENST00000357475 A0A0A6YYD5 115 aa24.05■■□□□ 1.44
SSBP3-202ENST00000357475 A0A1B0GX78 115 aa24.05■■□□□ 1.44
SSBP3-202ENST00000357475 TACR1P25103 407 aa24.05■■□□□ 1.44
SSBP3-202ENST00000357475 RORAP35398 523 aa24.05■■□□□ 1.44
SSBP3-202ENST00000357475 ARSFP54793 590 aa24.05■■□□□ 1.44
SSBP3-202ENST00000357475 TUBB8Q3ZCM7 444 aa24.05■■□□□ 1.44
SSBP3-202ENST00000357475 ZNF385CQ66K41 422 aaPredicted RBP24.05■■□□□ 1.44
SSBP3-202ENST00000357475 NOXRED1Q6NXP6 359 aa24.05■■□□□ 1.44
SSBP3-202ENST00000357475 SPATA21Q7Z572 469 aa24.05■■□□□ 1.44
SSBP3-202ENST00000357475 HOMEZQ8IX15 550 aa24.05■■□□□ 1.44
SSBP3-202ENST00000357475 FNDC5Q8NAU1 212 aa24.05■■□□□ 1.44
SSBP3-202ENST00000357475 SRFBP1Q8NEF9 429 aaKnown RBP24.05■■□□□ 1.44
SSBP3-202ENST00000357475 ACTRT2Q8TDY3 377 aa24.05■■□□□ 1.44
SSBP3-202ENST00000357475 MMABQ96EY8 250 aaPredicted RBP24.05■■□□□ 1.44
SSBP3-202ENST00000357475 FCRL1Q96LA6 429 aa24.05■■□□□ 1.44
SSBP3-202ENST00000357475 GBP5Q96PP8 586 aa24.05■■□□□ 1.44
SSBP3-202ENST00000357475 CCT8L2Q96SF2 557 aa24.05■■□□□ 1.44
SSBP3-202ENST00000357475 TCF7L2Q9NQB0 619 aa24.05■■□□□ 1.44
SSBP3-202ENST00000357475 TXLNGQ9NUQ3 528 aa24.05■■□□□ 1.44
SSBP3-202ENST00000357475 HCN3Q9P1Z3 774 aa24.05■■□□□ 1.44
SSBP3-202ENST00000357475 SRPK3Q9UPE1 567 aa24.05■■□□□ 1.44
SSBP3-202ENST00000357475 ASPMQ8IZT6 3477 aa24.04■■□□□ 1.44
SSBP3-202ENST00000357475 E9PBE3 544 aa24.04■■□□□ 1.44
SSBP3-202ENST00000357475 PCDH7O60245 1069 aa24.04■■□□□ 1.44
SSBP3-202ENST00000357475 KLHL41O60662 606 aa24.04■■□□□ 1.44
SSBP3-202ENST00000357475 NSA2O95478 260 aaKnown RBP24.04■■□□□ 1.44
SSBP3-202ENST00000357475 TIA1P31483 386 aaKnown RBP eCLIP24.04■■□□□ 1.448e-7■■■■■ 30.6
SSBP3-202ENST00000357475 DIO3P55073 304 aa24.04■■□□□ 1.44
SSBP3-202ENST00000357475 TGM3Q08188 693 aa24.04■■□□□ 1.44
SSBP3-202ENST00000357475 SLC9A5Q14940 896 aa24.04■■□□□ 1.44
SSBP3-202ENST00000357475 NUDT13Q86X67 352 aa24.04■■□□□ 1.44
SSBP3-202ENST00000357475 SLC46A1Q96NT5 459 aa24.04■■□□□ 1.44
SSBP3-202ENST00000357475 NSRP1Q9H0G5 558 aaKnown RBP24.04■■□□□ 1.44
SSBP3-202ENST00000357475 SLC22A11Q9NSA0 550 aa24.04■■□□□ 1.44
SSBP3-202ENST00000357475 AHSPQ9NZD4 102 aa24.04■■□□□ 1.44
SSBP3-202ENST00000357475 G3BP2Q9UN86 482 aaKnown RBP24.04■■□□□ 1.44
SSBP3-202ENST00000357475 SNX3O60493 162 aa24.03■■□□□ 1.44
SSBP3-202ENST00000357475 CPNE3O75131 537 aaKnown RBP24.03■■□□□ 1.44
SSBP3-202ENST00000357475 STK17BO94768 372 aa24.03■■□□□ 1.44
SSBP3-202ENST00000357475 SCELO95171 688 aa24.03■■□□□ 1.44
SSBP3-202ENST00000357475 LBPP18428 481 aa24.03■■□□□ 1.44
SSBP3-202ENST00000357475 ARFIP2P53365 341 aa24.03■■□□□ 1.44
SSBP3-202ENST00000357475 MTTPP55157 894 aa24.03■■□□□ 1.44
SSBP3-202ENST00000357475 SLAMF1Q13291 335 aa24.03■■□□□ 1.44
SSBP3-202ENST00000357475 YOD1Q5VVQ6 348 aaPredicted RBP24.03■■□□□ 1.44
SSBP3-202ENST00000357475 GALNT18Q6P9A2 607 aa24.03■■□□□ 1.44
SSBP3-202ENST00000357475 GALNT6Q8NCL4 622 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms