RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 BCL7BQ9BQE9 202 aa11.33□□□□□ -0.59
COL9A1-202ENST00000357250 OR51B5Q9H339 312 aa11.33□□□□□ -0.59
COL9A1-202ENST00000357250 CHMP1AQ9HD42 196 aaPredicted RBP11.33□□□□□ -0.59
COL9A1-202ENST00000357250 PDLIM7Q9NR12 457 aa11.33□□□□□ -0.59
COL9A1-202ENST00000357250 CTPS2Q9NRF8 586 aa11.33□□□□□ -0.59
COL9A1-202ENST00000357250 MAP10Q9P2G4 905 aa11.33□□□□□ -0.59
COL9A1-202ENST00000357250 RABL2AQ9UBK7 228 aaPredicted RBP11.33□□□□□ -0.59
COL9A1-202ENST00000357250 PRODH2Q9UF12 536 aa11.33□□□□□ -0.59
COL9A1-202ENST00000357250 C19orf25Q9UFG5 118 aaPredicted RBP11.33□□□□□ -0.59
COL9A1-202ENST00000357250 FBXO9Q9UK97 447 aaPredicted RBP11.33□□□□□ -0.59
COL9A1-202ENST00000357250 RABL2BQ9UNT1 228 aa11.33□□□□□ -0.59
COL9A1-202ENST00000357250 INPPL1O15357 1258 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 TSPAN6O43657 245 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 TLX2O43763 284 aaPredicted RBP11.33□□□□□ -0.6
COL9A1-202ENST00000357250 OR1I1O60431 355 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 SLC19A2O60779 497 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 MMP20O60882 483 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 CASRP41180 1078 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 MPP2Q14168 576 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 SEC23BQ15437 767 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 CLEC12AQ5QGZ9 265 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 PPP2R2DQ66LE6 453 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 NCEH1Q6PIU2 408 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 BLOC1S3Q6QNY0 202 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 ZNF517Q6ZMY9 492 aaPredicted RBP11.33□□□□□ -0.6
COL9A1-202ENST00000357250 GKN2Q86XP6 184 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 NRROSQ86YC3 692 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 PLA2G15Q8NCC3 412 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 CYB5D2Q8WUJ1 264 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 ARNTL2Q8WYA1 636 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 COQ8BQ96D53 544 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 L3HYPDHQ96EM0 354 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 FCRL3Q96P31 734 aaPredicted RBP11.33□□□□□ -0.6
COL9A1-202ENST00000357250 MVB12BQ9H7P6 319 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 GPRC5BQ9NZH0 403 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 COCHO43405 550 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 SNNO75324 88 aaPredicted RBP11.33□□□□□ -0.6
COL9A1-202ENST00000357250 AHSA1O95433 338 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 IVDP26440 423 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 AFF1P51825 1210 aaKnown RBP11.33□□□□□ -0.6
COL9A1-202ENST00000357250 ACTC1P68032 377 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 ACTA1P68133 377 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 SIX1Q15475 284 aaPredicted RBP11.33□□□□□ -0.6
COL9A1-202ENST00000357250 CLIP4Q8N3C7 705 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.33□□□□□ -0.6
COL9A1-202ENST00000357250 ZNF696Q9H7X3 374 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 RNF186Q9NXI6 227 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 A0A0G2JN53 185 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 DENRO43583 198 aaKnown RBP11.33□□□□□ -0.6
COL9A1-202ENST00000357250 FGF18O76093 207 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 GSTT2P0CG29 244 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 KDELR2P33947 212 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 HMGCLP35914 325 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 DIO3P55073 304 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 SNTA1Q13424 505 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 LY6G5CQ5SRR4 150 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 PDSS1Q5T2R2 415 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 NAPRTQ6XQN6 538 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 ERN2Q76MJ5 926 aaKnown RBP11.33□□□□□ -0.6
COL9A1-202ENST00000357250 OR2L3Q8NG85 312 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 OR4K14Q8NGD5 310 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 KCNA7Q96RP8 456 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 FBRSL1Q9HCM7 1045 aaKnown RBP11.33□□□□□ -0.6
COL9A1-202ENST00000357250 B3GAT2Q9NPZ5 323 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 ZNF224Q9NZL3 707 aa11.33□□□□□ -0.6
COL9A1-202ENST00000357250 STOX2Q9P2F5 926 aaPredicted RBP11.33□□□□□ -0.6
COL9A1-202ENST00000357250 ITGB1P05556 798 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 CHRM1P11229 460 aaPredicted RBP11.32□□□□□ -0.6
COL9A1-202ENST00000357250 DRD2P14416 443 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 SYN1P17600 705 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 ERP29P30040 261 aaKnown RBP11.32□□□□□ -0.6
COL9A1-202ENST00000357250 CASP9P55211 416 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 CLDN8P56748 225 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 RCAN2Q14206 197 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 FAM214AQ32MH5 1076 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 C6orf141Q5SZD1 244 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 PLEKHG7Q6ZR37 379 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 Q6ZVL8 140 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 ZNF227Q86WZ6 799 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 RASGEF1AQ8N9B8 481 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 OR8J1Q8NGP2 316 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 FAM72CH0Y354 149 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 PPM1BO75688 479 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 OAZ2O95190 189 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 IFNA21P01568 189 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 PABPC4LP0CB38 370 aaKnown RBP11.32□□□□□ -0.6
COL9A1-202ENST00000357250 GP1BBP13224 206 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 ZNF8P17098 575 aaPredicted RBP11.32□□□□□ -0.6
COL9A1-202ENST00000357250 KCNAB2Q13303 367 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 ARFRP1Q13795 201 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 MEP1AQ16819 746 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 TMEM35AQ53FP2 167 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 C2orf27AQ580R0 203 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 FAM72AQ5TYM5 149 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 LCN8Q6JVE9 175 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 FAM72DQ6L9T8 149 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 BAIAP2L2Q6UXY1 529 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 FAM72BQ86X60 149 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 TP53INP2Q8IXH6 220 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 FAM86B1Q8N7N1 296 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms