RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 SNX18Q96RF0 628 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 GFM1Q96RP9 751 aaKnown RBP9.72□□□□□ -0.85
PTPRA-203ENST00000356147 TOR4AQ9NXH8 423 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 KCTD5Q9NXV2 234 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 CARD8Q9Y2G2 431 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 POFUT2Q9Y2G5 429 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 A0A0X1KG70 313 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 ZNF840PA6NDX5 716 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 GADD45GO95257 159 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 SPAM1P38567 509 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 CSNK1DP48730 415 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 PFN3P60673 137 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 CSNK2BP67870 215 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 LSM11P83369 360 aaKnown RBP eCLIP9.72□□□□□ -0.85
PTPRA-203ENST00000356147 HNRNPA0Q13151 305 aaKnown RBP9.72□□□□□ -0.85
PTPRA-203ENST00000356147 KRR1Q13601 381 aaKnown RBP9.72□□□□□ -0.85
PTPRA-203ENST00000356147 SCARB2Q14108 478 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 MRPL58Q14197 206 aaKnown RBP9.72□□□□□ -0.85
PTPRA-203ENST00000356147 VEPH1Q14D04 833 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 DUSP7Q16829 419 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 FBXO43Q4G163 708 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 MPPE1Q53F39 396 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 IFI44LQ53G44 452 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 HECTD3Q5T447 861 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 C22orf42Q6IC83 251 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 OLIG3Q7RTU3 272 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 UBTD2Q8WUN7 234 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 SCAMP4Q969E2 229 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 TMCO6Q96DC7 493 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 DIRAS2Q96HU8 199 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 POLR2J2Q9GZM3 115 aaKnown RBP9.72□□□□□ -0.85
PTPRA-203ENST00000356147 SGK2Q9HBY8 427 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 CTPS2Q9NRF8 586 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 KLK4Q9Y5K2 254 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 DNAH14Q0VDD8 3507 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 C5orf42Q9H799 3197 aa9.72□□□□□ -0.85
PTPRA-203ENST00000356147 TRBV4-1A0A0J9YWV2 114 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 MRPS14O60783 128 aaKnown RBP9.71□□□□□ -0.85
PTPRA-203ENST00000356147 TSC22D2O75157 780 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 CSO75390 466 aaKnown RBP9.71□□□□□ -0.85
PTPRA-203ENST00000356147 HBQ1P09105 142 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 CCNYL3P0C7X3 344 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 RPS3P23396 243 aaKnown RBP eCLIP9.71□□□□□ -0.85
PTPRA-203ENST00000356147 CDC42P60953 191 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 OLR1P78380 273 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 RAE1P78406 368 aaKnown RBP9.71□□□□□ -0.85
PTPRA-203ENST00000356147 DBPQ10586 325 aaPredicted RBP9.71□□□□□ -0.85
PTPRA-203ENST00000356147 HYAL2Q12891 473 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 VEZF1Q14119 521 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 CCDC85BQ15834 202 aaPredicted RBP9.71□□□□□ -0.85
PTPRA-203ENST00000356147 KCNA10Q16322 511 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 PLAG1Q6DJT9 500 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 MACC1Q6ZN28 852 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 ZNF367Q7RTV3 350 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 NOXA1Q86UR1 476 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.71□□□□□ -0.85
PTPRA-203ENST00000356147 OR4C15Q8NGM1 316 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 SLC7A6Q92536 515 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 SLC35A5Q9BS91 424 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 HTATIP2Q9BUP3 242 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 ACER3Q9NUN7 267 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 PADI2Q9Y2J8 665 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 A3GALT2U3KPV4 340 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 CKAP5Q14008 2032 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 A0A0G2JMP0 313 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 A0A1W2PQL4 384 aaPredicted RBP9.71□□□□□ -0.85
PTPRA-203ENST00000356147 C1orf226A1L170 272 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 CCDC182A6NF36 153 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 SCAMP2O15127 329 aaKnown RBP9.71□□□□□ -0.85
PTPRA-203ENST00000356147 ZDHHC11BP0C7U3 371 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 ANXA8P13928 327 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 CD72P21854 359 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 CBLP22681 906 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 OR1D2P34982 312 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 TIE1P35590 1138 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 PREPP48147 710 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 RPS13P62277 151 aaKnown RBP9.71□□□□□ -0.85
PTPRA-203ENST00000356147 SMAD3P84022 425 aaKnown RBP9.71□□□□□ -0.85
PTPRA-203ENST00000356147 COL9A2Q14055 689 aaPredicted RBP9.71□□□□□ -0.85
PTPRA-203ENST00000356147 MBTPS1Q14703 1052 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 TAF1CQ15572 869 aaPredicted RBP9.71□□□□□ -0.85
PTPRA-203ENST00000356147 PYDC2Q56P42 97 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 CRTC1Q6UUV9 634 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 SHFQ7M4L6 423 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 RBM45Q8IUH3 476 aaKnown RBP9.71□□□□□ -0.85
PTPRA-203ENST00000356147 HJURPQ8NCD3 748 aaPredicted RBP9.71□□□□□ -0.85
PTPRA-203ENST00000356147 DENND6BQ8NEG7 585 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 JPH3Q8WXH2 748 aaPredicted RBP9.71□□□□□ -0.85
PTPRA-203ENST00000356147 ZIC5Q96T25 663 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 RAD9AQ99638 391 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 SRRQ9GZT4 340 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 CHST8Q9H2A9 424 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 NMNAT1Q9HAN9 279 aaPredicted RBP9.71□□□□□ -0.85
PTPRA-203ENST00000356147 CLN6Q9NWW5 311 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 FAM120CQ9NX05 1096 aaKnown RBP9.71□□□□□ -0.85
PTPRA-203ENST00000356147 CRNNQ9UBG3 495 aaPredicted RBP9.71□□□□□ -0.85
PTPRA-203ENST00000356147 MOSPD1Q9UJG1 213 aa9.71□□□□□ -0.85
PTPRA-203ENST00000356147 CASP8AP2Q9UKL3 1982 aa9.71□□□□□ -0.86
PTPRA-203ENST00000356147 TRBC2A0A5B9 178 aa9.71□□□□□ -0.86
PTPRA-203ENST00000356147 FABP12A6NFH5 140 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms