RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 MDC1Q14676 2089 aaKnown RBP16.82■□□□□ 0.28
NPAS3-202ENST00000356141 PFDN1O60925 122 aa16.82■□□□□ 0.28
NPAS3-202ENST00000356141 SEMA4FO95754 770 aa16.82■□□□□ 0.28
NPAS3-202ENST00000356141 RPN2P04844 631 aa16.82■□□□□ 0.28
NPAS3-202ENST00000356141 DRD1P21728 446 aa16.82■□□□□ 0.28
NPAS3-202ENST00000356141 FUT4P22083 530 aa16.82■□□□□ 0.28
NPAS3-202ENST00000356141 SSR2P43308 183 aa16.82■□□□□ 0.28
NPAS3-202ENST00000356141 GZMMP51124 257 aa16.82■□□□□ 0.28
NPAS3-202ENST00000356141 RPA4Q13156 261 aa16.82■□□□□ 0.28
NPAS3-202ENST00000356141 KHDRBS2Q5VWX1 349 aaKnown RBP16.82■□□□□ 0.28
NPAS3-202ENST00000356141 IQCF2Q8IXL9 164 aa16.82■□□□□ 0.28
NPAS3-202ENST00000356141 ANKFN1Q8N957 763 aa16.82■□□□□ 0.28
NPAS3-202ENST00000356141 GPATCH2Q9NW75 528 aa16.82■□□□□ 0.28
NPAS3-202ENST00000356141 TAAR2Q9P1P5 351 aa16.82■□□□□ 0.28
NPAS3-202ENST00000356141 ACSL5Q9ULC5 683 aa16.82■□□□□ 0.28
NPAS3-202ENST00000356141 ZNF860A6NHJ4 632 aa16.82■□□□□ 0.28
NPAS3-202ENST00000356141 ERI3O43414 337 aaKnown RBP16.82■□□□□ 0.28
NPAS3-202ENST00000356141 FURINP09958 794 aa16.82■□□□□ 0.28
NPAS3-202ENST00000356141 MTAPQ13126 283 aa16.82■□□□□ 0.28
NPAS3-202ENST00000356141 ADRM1Q16186 407 aa16.82■□□□□ 0.28
NPAS3-202ENST00000356141 SLC5A12Q1EHB4 618 aa16.82■□□□□ 0.28
NPAS3-202ENST00000356141 PRRT3Q5FWE3 981 aa16.82■□□□□ 0.28
NPAS3-202ENST00000356141 RPS26P11Q5JNZ5 115 aaPredicted RBP16.82■□□□□ 0.28
NPAS3-202ENST00000356141 ZNF438Q7Z4V0 828 aa16.82■□□□□ 0.28
NPAS3-202ENST00000356141 ZNF597Q96LX8 424 aa16.82■□□□□ 0.28
NPAS3-202ENST00000356141 BTBD9Q96Q07 612 aa16.82■□□□□ 0.28
NPAS3-202ENST00000356141 TEFMQ96QE5 360 aaKnown RBP16.82■□□□□ 0.28
NPAS3-202ENST00000356141 HAUS8Q9BT25 410 aa16.82■□□□□ 0.28
NPAS3-202ENST00000356141 C1QTNF7Q9BXJ2 289 aa16.82■□□□□ 0.28
NPAS3-202ENST00000356141 Q9H521 79 aa16.82■□□□□ 0.28
NPAS3-202ENST00000356141 LHX9Q9NQ69 397 aa16.82■□□□□ 0.28
NPAS3-202ENST00000356141 FAF1Q9UNN5 650 aaPredicted RBP16.82■□□□□ 0.28
NPAS3-202ENST00000356141 MITFO75030 526 aaPredicted RBP16.81■□□□□ 0.28
NPAS3-202ENST00000356141 RAP2AP10114 183 aa16.81■□□□□ 0.28
NPAS3-202ENST00000356141 CCINQ13939 588 aa16.81■□□□□ 0.28
NPAS3-202ENST00000356141 SMU1Q2TAY7 513 aa16.81■□□□□ 0.28
NPAS3-202ENST00000356141 WDR53Q7Z5U6 358 aaPredicted RBP16.81■□□□□ 0.28
NPAS3-202ENST00000356141 ZZZ3Q8IYH5 903 aa16.81■□□□□ 0.28
NPAS3-202ENST00000356141 KCT2Q8NC54 265 aa16.81■□□□□ 0.28
NPAS3-202ENST00000356141 OR52J3Q8NH60 311 aa16.81■□□□□ 0.28
NPAS3-202ENST00000356141 CXorf40BQ96DE9 158 aa16.81■□□□□ 0.28
NPAS3-202ENST00000356141 NR1H4Q96RI1 486 aaPredicted RBP16.81■□□□□ 0.28
NPAS3-202ENST00000356141 SH3GL1Q99961 368 aa16.81■□□□□ 0.28
NPAS3-202ENST00000356141 ADI1Q9BV57 179 aa16.81■□□□□ 0.28
NPAS3-202ENST00000356141 MIR1-1HGQ9H1L0 117 aa16.81■□□□□ 0.28
NPAS3-202ENST00000356141 STARD5Q9NSY2 213 aa16.81■□□□□ 0.28
NPAS3-202ENST00000356141 MAN2B2Q9Y2E5 1009 aa16.81■□□□□ 0.28
NPAS3-202ENST00000356141 CELSR3Q9NYQ7 3312 aa16.81■□□□□ 0.28
NPAS3-202ENST00000356141 CABIN1Q9Y6J0 2220 aa16.81■□□□□ 0.28
NPAS3-202ENST00000356141 A0A1W2PRB8 838 aa16.81■□□□□ 0.28
NPAS3-202ENST00000356141 FAM58BPP0C7Q3 252 aa16.81■□□□□ 0.28
NPAS3-202ENST00000356141 TYRP1P17643 537 aa16.81■□□□□ 0.28
NPAS3-202ENST00000356141 OLR1P78380 273 aa16.81■□□□□ 0.28
NPAS3-202ENST00000356141 GAS6Q14393 721 aa16.81■□□□□ 0.28
NPAS3-202ENST00000356141 ALG11Q2TAA5 492 aa16.81■□□□□ 0.28
NPAS3-202ENST00000356141 CMPK2Q5EBM0 449 aa16.81■□□□□ 0.28
NPAS3-202ENST00000356141 ZNF793Q6ZN11 406 aa16.81■□□□□ 0.28
NPAS3-202ENST00000356141 SLC22A18ASQ8N1D0 253 aa16.81■□□□□ 0.28
NPAS3-202ENST00000356141 METTL4Q8N3J2 472 aa16.81■□□□□ 0.28
NPAS3-202ENST00000356141 OR8J2Q8NGG1 315 aa16.81■□□□□ 0.28
NPAS3-202ENST00000356141 NFKBIDQ8NI38 313 aa16.81■□□□□ 0.28
NPAS3-202ENST00000356141 RAB26Q9ULW5 256 aa16.81■□□□□ 0.28
NPAS3-202ENST00000356141 A0A0J9YVX5 310 aa16.8■□□□□ 0.28
NPAS3-202ENST00000356141 UPK1AO00322 258 aa16.8■□□□□ 0.28
NPAS3-202ENST00000356141 MBTPS2O43462 519 aa16.8■□□□□ 0.28
NPAS3-202ENST00000356141 HS6ST1O60243 411 aa16.8■□□□□ 0.28
NPAS3-202ENST00000356141 HOXB9P17482 250 aaPredicted RBP16.8■□□□□ 0.28
NPAS3-202ENST00000356141 MAGP20916 626 aa16.8■□□□□ 0.28
NPAS3-202ENST00000356141 HNRNPA2B1P22626 353 aaKnown RBP16.8■□□□□ 0.28
NPAS3-202ENST00000356141 PTX3P26022 381 aaPredicted RBP16.8■□□□□ 0.28
NPAS3-202ENST00000356141 RPS9P46781 194 aaKnown RBP16.8■□□□□ 0.28
NPAS3-202ENST00000356141 ATP6AP1Q15904 470 aa16.8■□□□□ 0.28
NPAS3-202ENST00000356141 NHSL2Q5HYW2 709 aa16.8■□□□□ 0.28
NPAS3-202ENST00000356141 DEPDC1Q5TB30 811 aa16.8■□□□□ 0.28
NPAS3-202ENST00000356141 PPP4R4Q6NUP7 873 aa16.8■□□□□ 0.28
NPAS3-202ENST00000356141 DENND4AQ7Z401 1863 aa16.8■□□□□ 0.28
NPAS3-202ENST00000356141 VPS37AQ8NEZ2 397 aa16.8■□□□□ 0.28
NPAS3-202ENST00000356141 DCAF13Q9NV06 445 aaKnown RBP16.8■□□□□ 0.28
NPAS3-202ENST00000356141 PCDHB11Q9Y5F2 797 aa16.8■□□□□ 0.28
NPAS3-202ENST00000356141 DNAJB6O75190 326 aa16.8■□□□□ 0.28
NPAS3-202ENST00000356141 MAPK9P45984 424 aa16.8■□□□□ 0.28
NPAS3-202ENST00000356141 VLDLRP98155 873 aa16.8■□□□□ 0.28
NPAS3-202ENST00000356141 PRDX1Q06830 199 aaKnown RBP16.8■□□□□ 0.28
NPAS3-202ENST00000356141 TP53BP2Q13625 1128 aa16.8■□□□□ 0.28
NPAS3-202ENST00000356141 VMACQ2NL98 169 aa16.8■□□□□ 0.28
NPAS3-202ENST00000356141 RNF165Q6ZSG1 346 aa16.8■□□□□ 0.28
NPAS3-202ENST00000356141 UBE3DQ7Z6J8 389 aa16.8■□□□□ 0.28
NPAS3-202ENST00000356141 ZDHHC21Q8IVQ6 265 aa16.8■□□□□ 0.28
NPAS3-202ENST00000356141 WDR92Q96MX6 357 aa16.8■□□□□ 0.28
NPAS3-202ENST00000356141 NECTIN4Q96NY8 510 aa16.8■□□□□ 0.28
NPAS3-202ENST00000356141 MS4A8Q9BY19 250 aa16.8■□□□□ 0.28
NPAS3-202ENST00000356141 ZNF717Q9BY31 904 aaPredicted RBP16.8■□□□□ 0.28
NPAS3-202ENST00000356141 FAM120CQ9NX05 1096 aaKnown RBP16.8■□□□□ 0.28
NPAS3-202ENST00000356141 PADI4Q9UM07 663 aa16.8■□□□□ 0.28
NPAS3-202ENST00000356141 CERS1P27544 350 aa16.79■□□□□ 0.28
NPAS3-202ENST00000356141 HTR1BP28222 390 aa16.79■□□□□ 0.28
NPAS3-202ENST00000356141 ASMTP46597 345 aa16.79■□□□□ 0.28
NPAS3-202ENST00000356141 SRP54P61011 504 aaKnown RBP16.79■□□□□ 0.28
NPAS3-202ENST00000356141 ABHD18Q0P651 414 aa16.79■□□□□ 0.28
NPAS3-202ENST00000356141 RGNQ15493 299 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms