RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 ZNF616Q08AN1 781 aa16.69■□□□□ 0.26
COL27A1-201ENST00000356083 SEC23AQ15436 765 aa16.69■□□□□ 0.26
COL27A1-201ENST00000356083 BCL2A1Q16548 175 aa16.69■□□□□ 0.26
COL27A1-201ENST00000356083 BBS1Q8NFJ9 593 aa16.69■□□□□ 0.26
COL27A1-201ENST00000356083 STK35Q8TDR2 534 aa16.69■□□□□ 0.26
COL27A1-201ENST00000356083 DQX1Q8TE96 717 aaKnown RBP16.69■□□□□ 0.26
COL27A1-201ENST00000356083 GPR174Q9BXC1 333 aa16.69■□□□□ 0.26
COL27A1-201ENST00000356083 RANBP3Q9H6Z4 567 aaPredicted RBP16.69■□□□□ 0.26
COL27A1-201ENST00000356083 SGCEO43556 437 aa16.69■□□□□ 0.26
COL27A1-201ENST00000356083 SOX30O94993 753 aa16.69■□□□□ 0.26
COL27A1-201ENST00000356083 TYRP14679 529 aa16.69■□□□□ 0.26
COL27A1-201ENST00000356083 PTGER3P43115 390 aa16.69■□□□□ 0.26
COL27A1-201ENST00000356083 GTF2BQ00403 316 aa16.69■□□□□ 0.26
COL27A1-201ENST00000356083 TSTQ16762 297 aaKnown RBP16.69■□□□□ 0.26
COL27A1-201ENST00000356083 SCP2D1Q9UJQ7 156 aa16.69■□□□□ 0.26
COL27A1-201ENST00000356083 TGDSO95455 350 aa16.69■□□□□ 0.26
COL27A1-201ENST00000356083 TGM1P22735 817 aa16.69■□□□□ 0.26
COL27A1-201ENST00000356083 GPR137CQ8N3F9 429 aa16.69■□□□□ 0.26
COL27A1-201ENST00000356083 SGIP1Q9BQI5 828 aa16.69■□□□□ 0.26
COL27A1-201ENST00000356083 POLDIP3Q9BY77 421 aaKnown RBP16.69■□□□□ 0.26
COL27A1-201ENST00000356083 LHX5Q9H2C1 402 aa16.69■□□□□ 0.26
COL27A1-201ENST00000356083 MATN3O15232 486 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 GGT5P36269 586 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 GJA5P36382 358 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 FXYD4P59646 89 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 ASTE1Q2TB18 679 aaPredicted RBP16.68■□□□□ 0.26
COL27A1-201ENST00000356083 FANK1Q8TC84 345 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 ZNF578Q96N58 590 aaPredicted RBP16.68■□□□□ 0.26
COL27A1-201ENST00000356083 SLC2A4RGQ9NR83 387 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 SYN3O14994 580 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 PAK4O96013 591 aaPredicted RBP16.68■□□□□ 0.26
COL27A1-201ENST00000356083 CHRNA1P02708 482 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 RPS13P62277 151 aaKnown RBP16.68■□□□□ 0.26
COL27A1-201ENST00000356083 RSU1Q15404 277 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 ANKDD1AQ495B1 522 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 SLX4IPQ5VYV7 408 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 ZNF776Q68DI1 518 aaPredicted RBP16.68■□□□□ 0.26
COL27A1-201ENST00000356083 IL17RCQ8NAC3 791 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 CAMK1GQ96NX5 476 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 DEFB126Q9BYW3 111 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 NMUR2Q9GZQ4 415 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 SLC22A4Q9H015 551 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 TLR9Q9NR96 1032 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 ITGB1BP2Q9UKP3 347 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 ACOX3O15254 700 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 DUSP11O75319 330 aaKnown RBP16.68■□□□□ 0.26
COL27A1-201ENST00000356083 AKR1C4P17516 323 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 LILRA4P59901 499 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 RPS3AP61247 264 aaKnown RBP16.68■□□□□ 0.26
COL27A1-201ENST00000356083 SLC30A8Q8IWU4 369 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 SLC39A1Q9NY26 324 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 UBE2J1Q9Y385 318 aaPredicted RBP16.68■□□□□ 0.26
COL27A1-201ENST00000356083 HSD11B2P80365 405 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 TPRG1LQ5T0D9 272 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 LRIF1Q5T3J3 769 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 PTF1AQ7RTS3 328 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 XYLT1Q86Y38 959 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 OR13C4Q8NGS5 318 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 BSCL2Q96G97 398 aaPredicted RBP16.68■□□□□ 0.26
COL27A1-201ENST00000356083 COQ10BQ9H8M1 238 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 TMEM100Q9NV29 134 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 PEX16Q9Y5Y5 336 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 ACOT7O00154 380 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 ENSAO43768 121 aaKnown RBP16.68■□□□□ 0.26
COL27A1-201ENST00000356083 CLDN7O95471 211 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 IFNA10P01566 189 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 P04436 131 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 IFNA4P05014 189 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 S1PR1P21453 382 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 LTC4SQ16873 150 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 LRIT3Q3SXY7 679 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 OR52W1Q6IF63 320 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 SLC15A3Q8IY34 581 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 RBM15BQ8NDT2 890 aaKnown RBP16.68■□□□□ 0.26
COL27A1-201ENST00000356083 SEC14L1Q92503 715 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 HIPK2Q9H2X6 1198 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 ZNF395Q9H8N7 513 aaPredicted RBP16.68■□□□□ 0.26
COL27A1-201ENST00000356083 TAS2R9Q9NYW1 312 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 COL5A2P05997 1499 aaPredicted RBP16.68■□□□□ 0.26
COL27A1-201ENST00000356083 PIP5K1CO60331 668 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 AOC2O75106 756 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 KRBOX4Q5JUW0 171 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.68■□□□□ 0.26
COL27A1-201ENST00000356083 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.68■□□□□ 0.26
COL27A1-201ENST00000356083 RNF215Q9Y6U7 377 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 BCORL1Q5H9F3 1711 aa16.68■□□□□ 0.26
COL27A1-201ENST00000356083 ASTN1O14525 1302 aa16.67■□□□□ 0.26
COL27A1-201ENST00000356083 AGR2O95994 175 aa16.67■□□□□ 0.26
COL27A1-201ENST00000356083 ARG2P78540 354 aa16.67■□□□□ 0.26
COL27A1-201ENST00000356083 OGDHQ02218 1023 aa16.67■□□□□ 0.26
COL27A1-201ENST00000356083 PHF13Q86YI8 300 aaPredicted RBP16.67■□□□□ 0.26
COL27A1-201ENST00000356083 GRPEL2Q8TAA5 225 aa16.67■□□□□ 0.26
COL27A1-201ENST00000356083 ABCC3O15438 1527 aa16.67■□□□□ 0.26
COL27A1-201ENST00000356083 DNM1LO00429 736 aa16.67■□□□□ 0.26
COL27A1-201ENST00000356083 PRPS2P11908 318 aa16.67■□□□□ 0.26
COL27A1-201ENST00000356083 ITPRIPL2Q3MIP1 535 aa16.67■□□□□ 0.26
COL27A1-201ENST00000356083 CDONQ4KMG0 1287 aa16.67■□□□□ 0.26
COL27A1-201ENST00000356083 TMCO6Q96DC7 493 aa16.67■□□□□ 0.26
COL27A1-201ENST00000356083 NXF5Q9H1B4 397 aaKnown RBP16.67■□□□□ 0.26
COL27A1-201ENST00000356083 PRTFDC1Q9NRG1 225 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms