RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 KDF1Q8NAX2 398 aaPredicted RBP16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 FAR2Q96K12 515 aa16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 EML4Q9HC35 981 aaKnown RBP16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 PRDM7Q9NQW5 492 aa16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 SLC12A4Q9UP95 1085 aa16.94■□□□□ 0.3
PDLIM7-202ENST00000355841 TMEM8BA6NDV4 472 aa16.93■□□□□ 0.3
PDLIM7-202ENST00000355841 C9J4A7 227 aa16.93■□□□□ 0.3
PDLIM7-202ENST00000355841 PLPP1O14494 284 aa16.93■□□□□ 0.3
PDLIM7-202ENST00000355841 AZIN1O14977 448 aa16.93■□□□□ 0.3
PDLIM7-202ENST00000355841 EFSO43281 561 aa16.93■□□□□ 0.3
PDLIM7-202ENST00000355841 UROSP10746 265 aa16.93■□□□□ 0.3
PDLIM7-202ENST00000355841 CERS1P27544 350 aa16.93■□□□□ 0.3
PDLIM7-202ENST00000355841 RAP1GDS1P52306 607 aa16.93■□□□□ 0.3
PDLIM7-202ENST00000355841 HMGCS1Q01581 520 aa16.93■□□□□ 0.3
PDLIM7-202ENST00000355841 VWA2Q5GFL6 755 aa16.93■□□□□ 0.3
PDLIM7-202ENST00000355841 ZNF793Q6ZN11 406 aa16.93■□□□□ 0.3
PDLIM7-202ENST00000355841 KIAA1143Q96AT1 154 aaPredicted RBP16.93■□□□□ 0.3
PDLIM7-202ENST00000355841 MRPL1Q9BYD6 325 aaKnown RBP16.93■□□□□ 0.3
PDLIM7-202ENST00000355841 RBCK1Q9BYM8 510 aa16.93■□□□□ 0.3
PDLIM7-202ENST00000355841 DPH1Q9BZG8 443 aa16.93■□□□□ 0.3
PDLIM7-202ENST00000355841 ACTL8Q9H568 366 aa16.93■□□□□ 0.3
PDLIM7-202ENST00000355841 GPN3Q9UHW5 284 aaPredicted RBP16.93■□□□□ 0.3
PDLIM7-202ENST00000355841 TRAF6Q9Y4K3 522 aa16.93■□□□□ 0.3
PDLIM7-202ENST00000355841 ANKRD11Q6UB99 2663 aaPredicted RBP16.93■□□□□ 0.3
PDLIM7-202ENST00000355841 H0YIG0 161 aa16.92■□□□□ 0.3
PDLIM7-202ENST00000355841 JRKO75564 520 aa16.92■□□□□ 0.3
PDLIM7-202ENST00000355841 GRK2P25098 689 aa16.92■□□□□ 0.3
PDLIM7-202ENST00000355841 SERPINB5P36952 375 aa16.92■□□□□ 0.3
PDLIM7-202ENST00000355841 GALNT1Q10472 559 aaPredicted RBP16.92■□□□□ 0.3
PDLIM7-202ENST00000355841 ERV3-1Q14264 604 aa16.92■□□□□ 0.3
PDLIM7-202ENST00000355841 TMEM35AQ53FP2 167 aa16.92■□□□□ 0.3
PDLIM7-202ENST00000355841 MRPL14Q6P1L8 145 aaKnown RBP16.92■□□□□ 0.3
PDLIM7-202ENST00000355841 OVCH1Q7RTY7 1134 aa16.92■□□□□ 0.3
PDLIM7-202ENST00000355841 QRFPRQ96P65 431 aa16.92■□□□□ 0.3
PDLIM7-202ENST00000355841 KCNC2Q96PR1 638 aa16.92■□□□□ 0.3
PDLIM7-202ENST00000355841 SORT1Q99523 831 aa16.92■□□□□ 0.3
PDLIM7-202ENST00000355841 ACPTQ9BZG2 426 aa16.92■□□□□ 0.3
PDLIM7-202ENST00000355841 SOX17Q9H6I2 414 aaPredicted RBP16.92■□□□□ 0.3
PDLIM7-202ENST00000355841 MANSC1Q9H8J5 431 aa16.92■□□□□ 0.3
PDLIM7-202ENST00000355841 ZMIZ1Q9ULJ6 1067 aa16.92■□□□□ 0.3
PDLIM7-202ENST00000355841 FARSAQ9Y285 508 aaKnown RBP16.92■□□□□ 0.3
PDLIM7-202ENST00000355841 MAP4K5Q9Y4K4 846 aa16.92■□□□□ 0.3
PDLIM7-202ENST00000355841 LOC400499M0QZD8 3231 aa16.92■□□□□ 0.3
PDLIM7-202ENST00000355841 OR2W5A6NFC9 320 aa16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 TMEM114B3SHH9 223 aa16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 ONECUT2O95948 504 aa16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 GBAP04062 536 aa16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 PIM1P11309 404 aaPredicted RBP16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 SSR2P43308 183 aa16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 RPS15P62841 145 aaKnown RBP16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 TLE3Q04726 772 aa16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 RUNX2Q13950 521 aa16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 NKG7Q16617 165 aa16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 KANK2Q63ZY3 851 aa16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 LAPTM4BQ86VI4 370 aa16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 ZNF781Q8N8C0 355 aa16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 OR51Q1Q8NH59 317 aa16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 RGMAQ96B86 450 aa16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 PEX11GQ96HA9 241 aa16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 CCNL2Q96S94 520 aaPredicted RBP16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 SERPINI1Q99574 410 aa16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 TUBB1Q9H4B7 451 aa16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 COPS7BQ9H9Q2 264 aaPredicted RBP16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 INTS9Q9NV88 658 aaKnown RBP16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 ZNF282Q9UDV7 671 aaPredicted RBP16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 DNAJC15Q9Y5T4 150 aa16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 C21orf140B9A014 251 aa16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 CHST10O43529 356 aa16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 EEDO75530 441 aaKnown RBP16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 KLF7O75840 302 aaPredicted RBP16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 ATP5A1P25705 553 aaKnown RBP16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 PTPN4P29074 926 aa16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 XCR1P46094 333 aa16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 TGM3Q08188 693 aa16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 CUL3Q13618 768 aa16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 AP5B1Q2VPB7 878 aa16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 UGT3A2Q3SY77 523 aa16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 C10orf62Q5T681 223 aaPredicted RBP16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 OR4C11Q6IEV9 310 aa16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 LRRC69Q6ZNQ3 347 aa16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 ACOT4Q8N9L9 421 aa16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 STT3BQ8TCJ2 826 aa16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 DYDC1Q8WWB3 177 aa16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 ZNF75CPQ92670 426 aaPredicted RBP16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 CENPKQ9BS16 269 aa16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 TBCDQ9BTW9 1192 aa16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 ZNF717Q9BY31 904 aaPredicted RBP16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 BRF2Q9HAW0 419 aa16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 MED4Q9NPJ6 270 aa16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 PTRH2Q9Y3E5 179 aaKnown RBP16.91■□□□□ 0.3
PDLIM7-202ENST00000355841 FAM227AF5H4B4 570 aa16.9■□□□□ 0.3
PDLIM7-202ENST00000355841 CDC123O75794 336 aaPredicted RBP16.9■□□□□ 0.3
PDLIM7-202ENST00000355841 FGF4P08620 206 aa16.9■□□□□ 0.3
PDLIM7-202ENST00000355841 RAB40ALP0C0E4 278 aa16.9■□□□□ 0.3
PDLIM7-202ENST00000355841 ZGLP1P0C6A0 271 aa16.9■□□□□ 0.3
PDLIM7-202ENST00000355841 LINC00032P0C843 101 aa16.9■□□□□ 0.3
PDLIM7-202ENST00000355841 HIST1H1TP22492 207 aaPredicted RBP16.9■□□□□ 0.3
PDLIM7-202ENST00000355841 MTTPP55157 894 aa16.9■□□□□ 0.3
PDLIM7-202ENST00000355841 OCA2Q04671 838 aa16.9■□□□□ 0.3
PDLIM7-202ENST00000355841 BTKQ06187 659 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms