RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 APPL2Q8NEU8 664 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 APOLD1Q96LR9 279 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 MENTQ9BUN1 341 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 P2RY12Q9H244 342 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 TBC1D17Q9HA65 648 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.35□□□□□ -1.55
CD47-201ENST00000355354 MAN2C1Q9NTJ4 1040 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 FLRT3Q9NZU0 649 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 NDUFAF4Q9P032 175 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 PCDHGA6Q9Y5G7 932 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 MUC4Q99102 2169 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 FEZF1A0PJY2 475 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 GABRR3A8MPY1 467 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 MATN3O15232 486 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 IL1BP01584 269 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 PSMD8P48556 350 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 MTAPQ13126 283 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 TAB1Q15750 504 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 ZNF77Q15935 545 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 NDUFAF6Q330K2 333 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 COLEC12Q5KU26 742 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 TANGO2Q6ICL3 276 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 EID3Q8N140 333 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 LINGO1Q96FE5 620 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 PDLIM5Q96HC4 596 aaKnown RBP5.35□□□□□ -1.55
CD47-201ENST00000355354 SPATA17Q96L03 361 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 FCRL5Q96RD9 977 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 OCSTAMPQ9BR26 566 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 GCOM2Q9BZD3 368 aaPredicted RBP5.35□□□□□ -1.55
CD47-201ENST00000355354 DSN1Q9H410 356 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 KLHL31Q9H511 634 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 TIGARQ9NQ88 270 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 ZNF226Q9NYT6 803 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 SH3GLB1Q9Y371 365 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 YLPM1P49750 1951 aaKnown RBP5.35□□□□□ -1.55
CD47-201ENST00000355354 NPIPA5A0A0B4J1W7 369 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 NPIPA7E9PJI5 369 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 H0Y626 953 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 SOCS5O75159 536 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 RGS11O94810 467 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 TRIM16O95361 564 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 CXCL14O95715 111 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 STAU1O95793 577 aaKnown RBP5.35□□□□□ -1.55
CD47-201ENST00000355354 CH25HO95992 272 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 IGLV3-27P01718 113 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 CELA2BP08218 269 aaPredicted RBP5.35□□□□□ -1.55
CD47-201ENST00000355354 NPIPA8P0DM63 369 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 TMIGD3P0DMS9 266 aaPredicted RBP5.35□□□□□ -1.55
CD47-201ENST00000355354 KLK2P20151 261 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 HOXD12P35452 270 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 RPL5P46777 297 aaKnown RBP5.35□□□□□ -1.55
CD47-201ENST00000355354 PWP1Q13610 501 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 MLF2Q15773 248 aaPredicted RBP5.35□□□□□ -1.55
CD47-201ENST00000355354 UGP2Q16851 508 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 BCL7AQ4VC05 210 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 ETFBKMTQ8IXQ9 262 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 BBS5Q8N3I7 341 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 NEIL2Q969S2 332 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 TTYH2Q9BSA4 534 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 AKIRIN1Q9H9L7 192 aaPredicted RBP5.35□□□□□ -1.55
CD47-201ENST00000355354 SSU72Q9NP77 194 aaKnown RBP5.35□□□□□ -1.55
CD47-201ENST00000355354 DMAP1Q9NPF5 467 aaPredicted RBP5.35□□□□□ -1.55
CD47-201ENST00000355354 CUEDC1Q9NWM3 386 aaPredicted RBP5.35□□□□□ -1.55
CD47-201ENST00000355354 NPAP1Q9NZP6 1156 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 MAN2B2Q9Y2E5 1009 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 OR52A4PA6NMU1 304 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 SLC1A7O00341 560 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 UBDO15205 165 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 NUPL2O15504 423 aaKnown RBP5.35□□□□□ -1.55
CD47-201ENST00000355354 THP07101 528 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 STMN1P16949 149 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 RFX1P22670 979 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 CXCR2P25025 360 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 TRHRP34981 398 aaPredicted RBP5.35□□□□□ -1.55
CD47-201ENST00000355354 TPTEP56180 551 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 FAM53BQ14153 422 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 LIN9Q5TKA1 542 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 AFTPHQ6ULP2 937 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 CCDC149Q6ZUS6 474 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 AHSA2Q719I0 299 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 SLC7A13Q8TCU3 470 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 ATL1Q8WXF7 558 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 THAP4Q8WY91 577 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 VTI1AQ96AJ9 217 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 C16orf58Q96GQ5 468 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 UROC1Q96N76 676 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 SEPT5Q99719 369 aaPredicted RBP5.35□□□□□ -1.55
CD47-201ENST00000355354 COPS4Q9BT78 406 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 NSRP1Q9H0G5 558 aaKnown RBP5.35□□□□□ -1.55
CD47-201ENST00000355354 CHST8Q9H2A9 424 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 LRRC40Q9H9A6 602 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 AKIP1Q9NQ31 210 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 OPTCQ9UBM4 332 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 SEC14L4Q9UDX3 406 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 KCNG2Q9UJ96 466 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 SNX8Q9Y5X2 465 aa5.35□□□□□ -1.55
CD47-201ENST00000355354 ZNF840PA6NDX5 716 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 TMPRSS11DO60235 418 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 SEC14L2O76054 403 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 ZNF205O95201 554 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms