RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 RPS27LQ71UM5 84 aaKnown RBP12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 GPC2Q8N158 579 aa12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 RHEBL1Q8TAI7 183 aa12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 PBDC1Q9BVG4 233 aa12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 NANSQ9NR45 359 aa12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 SLC22A14Q9Y267 594 aa12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 SHPRHQ149N8 1683 aa12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 GGT5P36269 586 aa12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 CRISP1P54107 249 aa12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 SLC8B1Q6J4K2 584 aa12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 PAPD5Q8NDF8 572 aaKnown RBP12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 OR6C4Q8NGE1 309 aa12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 FZD8Q9H461 694 aa12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 BIN3Q9NQY0 253 aa12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 HSPA12AO43301 675 aa12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 C11orf91Q3C1V1 193 aa12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 CXCL17Q6UXB2 119 aa12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 GALNT13Q8IUC8 556 aa12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 FAM109AQ8N4B1 249 aa12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 DDX1Q92499 740 aaKnown RBP12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.29□□□□□ -0.447e-10■■■■■ 39.5
SYNCRIP-201ENST00000355238 PIGVQ9NUD9 493 aa12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 MYBPHLA2RUH7 354 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 C9IYK1 514 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 IL12BP29460 328 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 GJA9P57773 515 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 NOL9Q5SY16 702 aaKnown RBP12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 SYPL2Q5VXT5 272 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 ALG1LQ6GMV1 187 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 ARMC5Q96C12 935 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 ZNF597Q96LX8 424 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 EIF5A2Q9GZV4 153 aaKnown RBP12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 ADH1AP07327 375 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 OR4Q2P0C623 313 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 GGT1P19440 569 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 KDELR2P33947 212 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 OR1D2P34982 312 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 ALDH3B2P48448 385 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 VGLL4Q14135 290 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 MAPK14Q16539 360 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 NKAPLQ5M9Q1 402 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 WDR53Q7Z5U6 358 aaPredicted RBP12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 GALNT7Q86SF2 657 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 HS3ST5Q8IZT8 346 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 OR52E4Q8NGH9 312 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 OR8K5Q8NH50 307 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 CDCA5Q96FF9 252 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 HIST1H2AAQ96QV6 131 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 TEX13CA0A0J9YWL9 993 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 SLC33A1O00400 549 aaPredicted RBP12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 EIF1AYO14602 144 aaKnown RBP12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 EIF1AXP47813 144 aaKnown RBP12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 EXOC3L2Q2M3D2 409 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 AGAP6Q5VW22 663 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 GLT8D1Q68CQ7 371 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 THOC6Q86W42 341 aaKnown RBP12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 SLC22A15Q8IZD6 547 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 OR8S1Q8NH09 359 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 GRHL3Q8TE85 626 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 AGAP4Q96P64 663 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 RAD9AQ99638 391 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 ZNF649Q9BS31 505 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 YIPF4Q9BSR8 244 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 BCO2Q9BYV7 579 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 ADAP2Q9NPF8 381 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 NUFIP1Q9UHK0 495 aaKnown RBP12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 RNF11Q9Y3C5 154 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 IFNA17P01571 189 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 GTF2IRD2BQ6EKJ0 949 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 CEACAM19Q7Z692 300 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 GTF2IRD2Q86UP8 949 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 FAM129CQ86XR2 697 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 OR51G2Q8NGK0 314 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 NDNFQ8TB73 568 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 MRPS23Q9Y3D9 190 aaKnown RBP12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 SLC35F4A4IF30 521 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 ATP5A1P25705 553 aaKnown RBP12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 CLCNKBP51801 687 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 GPR68Q15743 365 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 GPR135Q8IZ08 494 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 CHFRQ96EP1 664 aa12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 CPNE2Q96FN4 548 aaPredicted RBP12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 NECAB3Q96P71 396 aaPredicted RBP12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 ZNF334Q9HCZ1 680 aaPredicted RBP12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 MRPS30Q9NP92 439 aaKnown RBP12.28□□□□□ -0.44
SYNCRIP-201ENST00000355238 AOC2O75106 756 aa12.27□□□□□ -0.44
SYNCRIP-201ENST00000355238 CAPN3P20807 821 aa12.27□□□□□ -0.44
SYNCRIP-201ENST00000355238 EVI2BP34910 448 aa12.27□□□□□ -0.44
SYNCRIP-201ENST00000355238 FXYD6P3P58550 94 aa12.27□□□□□ -0.44
SYNCRIP-201ENST00000355238 GK2Q14410 553 aaPredicted RBP12.27□□□□□ -0.44
SYNCRIP-201ENST00000355238 KCNJ8Q15842 424 aa12.27□□□□□ -0.44
SYNCRIP-201ENST00000355238 GFOD2Q3B7J2 385 aa12.27□□□□□ -0.44
SYNCRIP-201ENST00000355238 KRBOX4Q5JUW0 171 aa12.27□□□□□ -0.44
SYNCRIP-201ENST00000355238 ARSKQ6UWY0 536 aa12.27□□□□□ -0.44
SYNCRIP-201ENST00000355238 CLEC20AQ6ZU45 233 aa12.27□□□□□ -0.44
SYNCRIP-201ENST00000355238 CERKQ8TCT0 537 aa12.27□□□□□ -0.44
SYNCRIP-201ENST00000355238 LMLNQ96KR4 655 aa12.27□□□□□ -0.44
SYNCRIP-201ENST00000355238 TAS2R8Q9NYW2 309 aa12.27□□□□□ -0.44
SYNCRIP-201ENST00000355238 ARVCFO00192 962 aa12.27□□□□□ -0.44
SYNCRIP-201ENST00000355238 SYN3O14994 580 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms