RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 HOXB13Q92826 284 aaPredicted RBP5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 PITX2Q99697 317 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 TRBC2A0A5B9 178 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 SH3PXD2BA1X283 911 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 MMP20O60882 483 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 ATG12O94817 140 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 CHMP24386 653 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 ADH6P28332 368 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 FAPQ12884 760 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 SH3PXD2AQ5TCZ1 1133 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 HACD2Q6Y1H2 254 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 PIAS4Q8N2W9 510 aaPredicted RBP5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 C1orf52Q8N6N3 182 aaKnown RBP5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 ACDQ96AP0 544 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 MALSU1Q96EH3 234 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 HSD17B14Q9BPX1 270 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 HINT2Q9BX68 163 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 RBCK1Q9BYM8 510 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 ZFR2Q9UPR6 939 aaKnown RBP5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 MLLT10P55197 1068 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 EEFSECP57772 596 aaKnown RBP5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 RPS13P62277 151 aaKnown RBP5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 CDNFQ49AH0 187 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 DUS1LQ6P1R4 473 aaKnown RBP5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 DPY19L3Q6ZPD9 716 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 TMEM151BQ8IW70 566 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 OR13C4Q8NGS5 318 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 G6PC3Q9BUM1 346 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 OR8D2Q9GZM6 311 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 OR2S2Q9NQN1 319 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 NANSQ9NR45 359 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 POP7O75817 140 aaKnown RBP5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 HOXD8P13378 290 aaPredicted RBP5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 RPS3AP61247 264 aaKnown RBP5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 TUBA1BP68363 451 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 TATDN1Q6P1N9 297 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 TUBA1AQ71U36 451 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 ANKRD23Q86SG2 305 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 LHFPL3Q86UP9 236 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 RASGEF1CQ8N431 466 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 DNAJA3Q96EY1 480 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 OR1F2PQ96R84 312 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 ZNF451Q9Y4E5 1061 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 RELL1Q8IUW5 271 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 GNG13Q9P2W3 67 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 RNF215Q9Y6U7 377 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 GPR25O00155 361 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 FLRT2O43155 660 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 RPS24P62847 133 aaKnown RBP5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 KIAA0930Q6ICG6 404 aaPredicted RBP5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 CHPT1Q8WUD6 406 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 SLC25A44Q96H78 314 aaPredicted RBP5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 ENAMQ9NRM1 1142 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 PRODH2Q9UF12 536 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 ITSN1Q15811 1721 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 F5H0A9 414 aaPredicted RBP5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 MFSD13AQ14CX5 517 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 ADGRF1Q5T601 910 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 C22orf15Q8WYQ4 148 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 CGREF1Q99674 301 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 TP53I11O14683 189 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 HCRTR2O43614 444 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 CHRNA1P02708 482 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 GGT2P36268 569 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 ANKRD22Q5VYY1 191 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 DHDHQ9UQ10 334 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 RP1P56715 2156 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 KDM6BO15054 1643 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 CLTCL1P53675 1640 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 CLCA1A8K7I4 914 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 TULP2O00295 520 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 INHAP05111 366 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 DAOAP59103 153 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 IRF9Q00978 393 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 LIX1LQ8IVB5 337 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 GATSQ8NAP1 163 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 PBDC1Q9BVG4 233 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 SEC14L4Q9UDX3 406 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 TNS2Q63HR2 1409 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 TTC24A2A3L6 582 aaPredicted RBP5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 C2orf72A6NCS6 295 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 ALPIP09923 528 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 CNPY1Q3B7I2 92 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 ARSHQ5FYA8 562 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 NIPAL1Q6NVV3 410 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 PAQR3Q6TCH7 311 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 SH3RF1Q7Z6J0 888 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 MRPL41Q8IXM3 137 aaKnown RBP5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 THAP4Q8WY91 577 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 RHBDF1Q96CC6 855 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 ZNF358Q9NW07 568 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 PREX2Q70Z35 1606 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 ADH1BP00325 375 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 ERP29P30040 261 aaKnown RBP5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 HNRNPA0Q13151 305 aaKnown RBP5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 TPGS2Q68CL5 300 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 SPRYD4Q8WW59 207 aaPredicted RBP5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 TM9SF4Q92544 642 aa5.59□□□□□ -1.51
SRGAP1-201ENST00000355086 DNAJC27Q9NZQ0 273 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms