RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 REEP4Q9H6H4 257 aa14.84□□□□□ -0.03
CTSA-202ENST00000354880 IL1RL2Q9HB29 575 aa14.84□□□□□ -0.03
CTSA-202ENST00000354880 PRPF19Q9UMS4 504 aaKnown RBP14.84□□□□□ -0.03
CTSA-202ENST00000354880 PCDHGA7Q9Y5G6 932 aa14.84□□□□□ -0.03
CTSA-202ENST00000354880 MN1Q10571 1320 aaPredicted RBP14.84□□□□□ -0.03
CTSA-202ENST00000354880 A0A088AWK7 358 aa14.83□□□□□ -0.04
CTSA-202ENST00000354880 LNP1A1A4G5 178 aa14.83□□□□□ -0.04
CTSA-202ENST00000354880 HCRTR1O43613 425 aa14.83□□□□□ -0.04
CTSA-202ENST00000354880 TMPRSS11DO60235 418 aa14.83□□□□□ -0.04
CTSA-202ENST00000354880 ZBTB11O95625 1053 aaPredicted RBP14.83□□□□□ -0.04
CTSA-202ENST00000354880 NPPAP01160 153 aa14.83□□□□□ -0.04
CTSA-202ENST00000354880 ZNF888P0CJ79 500 aaPredicted RBP14.83□□□□□ -0.04
CTSA-202ENST00000354880 ATP5A1P25705 553 aaKnown RBP14.83□□□□□ -0.04
CTSA-202ENST00000354880 CSF2RBP32927 897 aa14.83□□□□□ -0.04
CTSA-202ENST00000354880 MLLT3P42568 568 aaPredicted RBP14.83□□□□□ -0.04
CTSA-202ENST00000354880 PSME3P61289 254 aa14.83□□□□□ -0.04
CTSA-202ENST00000354880 TRA2BP62995 288 aaKnown RBP14.83□□□□□ -0.04
CTSA-202ENST00000354880 SUZ12Q15022 739 aaKnown RBP14.83□□□□□ -0.04
CTSA-202ENST00000354880 PERM1Q5SV97 790 aa14.83□□□□□ -0.04
CTSA-202ENST00000354880 CPTPQ5TA50 214 aa14.83□□□□□ -0.04
CTSA-202ENST00000354880 OR4F3Q6IEY1 312 aa14.83□□□□□ -0.04
CTSA-202ENST00000354880 C8orf82Q6P1X6 216 aaPredicted RBP14.83□□□□□ -0.04
CTSA-202ENST00000354880 BNC2Q6ZN30 1099 aaPredicted RBP14.83□□□□□ -0.04
CTSA-202ENST00000354880 MSANTD1Q6ZTZ1 278 aa14.83□□□□□ -0.04
CTSA-202ENST00000354880 R3HCC1LQ7Z5L2 792 aaKnown RBP14.83□□□□□ -0.04
CTSA-202ENST00000354880 CAMKMTQ7Z624 323 aa14.83□□□□□ -0.04
CTSA-202ENST00000354880 MCATQ8IVS2 390 aaKnown RBP14.83□□□□□ -0.04
CTSA-202ENST00000354880 SCUBE1Q8IWY4 988 aa14.83□□□□□ -0.04
CTSA-202ENST00000354880 ULK2Q8IYT8 1036 aa14.83□□□□□ -0.04
CTSA-202ENST00000354880 ZCCHC7Q8N3Z6 543 aaKnown RBP14.83□□□□□ -0.04
CTSA-202ENST00000354880 CSNK1A1LQ8N752 337 aa14.83□□□□□ -0.04
CTSA-202ENST00000354880 AMER3Q8N944 861 aa14.83□□□□□ -0.04
CTSA-202ENST00000354880 ACOT4Q8N9L9 421 aa14.83□□□□□ -0.04
CTSA-202ENST00000354880 OR8K5Q8NH50 307 aa14.83□□□□□ -0.04
CTSA-202ENST00000354880 UTP15Q8TED0 518 aaKnown RBP14.83□□□□□ -0.04
CTSA-202ENST00000354880 GTF2H4Q92759 462 aa14.83□□□□□ -0.04
CTSA-202ENST00000354880 TM4SF18Q96CE8 201 aa14.83□□□□□ -0.04
CTSA-202ENST00000354880 CLPTM1LQ96KA5 538 aa14.83□□□□□ -0.04
CTSA-202ENST00000354880 CDRT15Q96T59 188 aa14.83□□□□□ -0.04
CTSA-202ENST00000354880 HOPXQ9BPY8 73 aaPredicted RBP14.83□□□□□ -0.04
CTSA-202ENST00000354880 SLC39A3Q9BRY0 314 aa14.83□□□□□ -0.04
CTSA-202ENST00000354880 COL25A1Q9BXS0 654 aaPredicted RBP14.83□□□□□ -0.04
CTSA-202ENST00000354880 NLNQ9BYT8 704 aa14.83□□□□□ -0.04
CTSA-202ENST00000354880 KCNH6Q9H252 994 aa14.83□□□□□ -0.04
CTSA-202ENST00000354880 COPS7BQ9H9Q2 264 aaPredicted RBP14.83□□□□□ -0.04
CTSA-202ENST00000354880 PDE7BQ9NP56 450 aa14.83□□□□□ -0.04
CTSA-202ENST00000354880 SOHLH2Q9NX45 425 aa14.83□□□□□ -0.04
CTSA-202ENST00000354880 ATP6V1HQ9UI12 483 aa14.83□□□□□ -0.04
CTSA-202ENST00000354880 EXO1Q9UQ84 846 aaKnown RBP14.83□□□□□ -0.04
CTSA-202ENST00000354880 FXYD1O00168 92 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 MAP3K7O43318 606 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 SRPX2O60687 465 aaPredicted RBP14.82□□□□□ -0.04
CTSA-202ENST00000354880 RETP07949 1114 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 FURINP09958 794 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 SMIM10L1P0DMW3 83 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 PIM1P11309 404 aaPredicted RBP14.82□□□□□ -0.04
CTSA-202ENST00000354880 MC1RQ01726 317 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 KLC1Q07866 573 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 PDE7AQ13946 482 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 SLC9A5Q14940 896 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 HEPACAMQ14CZ8 416 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 PROX2Q3B8N5 592 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 ANKRD26P1Q6NSI1 321 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 ABHD13Q7L211 337 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 DGLUCYQ7Z3D6 616 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 DHDDSQ86SQ9 333 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 ZCCHC10Q8TBK6 192 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 COQ8BQ96D53 544 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 MTERF3Q96E29 417 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 SMIM10Q96HG1 83 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 GPATCH1Q9BRR8 931 aaKnown RBP14.82□□□□□ -0.04
CTSA-202ENST00000354880 DUSP26Q9BV47 211 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 RMND5AQ9H871 391 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 SPAG4Q9NPE6 437 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 TMEM9Q9P0T7 183 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 SH3BP4Q9P0V3 963 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 SLAMF8Q9P0V8 285 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 BTBD3Q9Y2F9 522 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 SCN3AQ9NY46 2000 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 TXNDC9O14530 226 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 CASC3O15234 703 aaKnown RBP14.82□□□□□ -0.04
CTSA-202ENST00000354880 SCELO95171 688 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 KCNH1O95259 989 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 B3GALT4O96024 378 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 FAM58BPP0C7Q3 252 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 LAMP1P11279 417 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 CKMT1AP12532 417 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 BTN3A2P78410 334 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 DAB2P98082 770 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 PLIN5Q00G26 463 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 FOXM1Q08050 763 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 SLAMF1Q13291 335 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 SQSTM1Q13501 440 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 C6orf10Q5SRN2 563 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 NUDT22Q9BRQ3 303 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 ROGDIQ9GZN7 287 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 MIEF1Q9NQG6 463 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 ATAD3AQ9NVI7 634 aa14.82□□□□□ -0.04
CTSA-202ENST00000354880 DNAAF2Q9NVR5 837 aaKnown RBP14.82□□□□□ -0.04
CTSA-202ENST00000354880 FAM120CQ9NX05 1096 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms