RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 RPRMLQ8N4K4 120 aa10.53□□□□□ -0.72
RTN3-204ENST00000354497 STYXQ8WUJ0 223 aa10.53□□□□□ -0.72
RTN3-204ENST00000354497 ASZ1Q8WWH4 475 aa10.53□□□□□ -0.72
RTN3-204ENST00000354497 RAD51AP1Q96B01 352 aa10.53□□□□□ -0.72
RTN3-204ENST00000354497 CYTH2Q99418 400 aa10.53□□□□□ -0.72
RTN3-204ENST00000354497 NPAS2Q99743 824 aa10.53□□□□□ -0.72
RTN3-204ENST00000354497 MDFIQ99750 246 aa10.53□□□□□ -0.72
RTN3-204ENST00000354497 FAM118BQ9BPY3 351 aa10.53□□□□□ -0.72
RTN3-204ENST00000354497 GPATCH1Q9BRR8 931 aaKnown RBP10.53□□□□□ -0.72
RTN3-204ENST00000354497 TP63Q9H3D4 680 aaPredicted RBP10.53□□□□□ -0.72
RTN3-204ENST00000354497 CDCP1Q9H5V8 836 aa10.53□□□□□ -0.72
RTN3-204ENST00000354497 INIPQ9NRY2 104 aa10.53□□□□□ -0.72
RTN3-204ENST00000354497 RUVBL2Q9Y230 463 aaKnown RBP10.53□□□□□ -0.72
RTN3-204ENST00000354497 FAM32AQ9Y421 112 aaKnown RBP10.53□□□□□ -0.72
RTN3-204ENST00000354497 NFS1Q9Y697 457 aa10.53□□□□□ -0.72
RTN3-204ENST00000354497 OR2A25A4D2G3 310 aa10.52□□□□□ -0.73
RTN3-204ENST00000354497 OR2W5A6NFC9 320 aa10.52□□□□□ -0.73
RTN3-204ENST00000354497 SOWAHDA6NJG2 315 aa10.52□□□□□ -0.73
RTN3-204ENST00000354497 NDC80O14777 642 aa10.52□□□□□ -0.73
RTN3-204ENST00000354497 PSTPIP1O43586 416 aa10.52□□□□□ -0.73
RTN3-204ENST00000354497 FOXS1O43638 330 aa10.52□□□□□ -0.73
RTN3-204ENST00000354497 NME2P1O60361 137 aa10.52□□□□□ -0.73
RTN3-204ENST00000354497 PRMT3O60678 531 aa10.52□□□□□ -0.73
RTN3-204ENST00000354497 HNRNPCL1O60812 293 aaKnown RBP10.52□□□□□ -0.73
RTN3-204ENST00000354497 NEURL1O76050 574 aa10.52□□□□□ -0.73
RTN3-204ENST00000354497 PDE9AO76083 593 aa10.52□□□□□ -0.73
RTN3-204ENST00000354497 MYZAPP0CAP1 466 aa10.52□□□□□ -0.73
RTN3-204ENST00000354497 NME2P22392 152 aa10.52□□□□□ -0.73
RTN3-204ENST00000354497 FOXN2P32314 431 aa10.52□□□□□ -0.73
RTN3-204ENST00000354497 EIF3BP55884 814 aaKnown RBP10.52□□□□□ -0.73
RTN3-204ENST00000354497 ADAM8P78325 824 aa10.52□□□□□ -0.73
RTN3-204ENST00000354497 PMPCAQ10713 525 aa10.52□□□□□ -0.73
RTN3-204ENST00000354497 SNTB1Q13884 538 aaKnown RBP10.52□□□□□ -0.73
RTN3-204ENST00000354497 EXT1Q16394 746 aa10.52□□□□□ -0.73
RTN3-204ENST00000354497 LIN52Q52LA3 116 aa10.52□□□□□ -0.73
RTN3-204ENST00000354497 H3F3CQ6NXT2 135 aa10.52□□□□□ -0.73
RTN3-204ENST00000354497 CLEC9AQ6UXN8 241 aa10.52□□□□□ -0.73
RTN3-204ENST00000354497 ADCK2Q7Z695 626 aa10.52□□□□□ -0.73
RTN3-204ENST00000354497 TBC1D1Q86TI0 1168 aaPredicted RBP10.52□□□□□ -0.73
RTN3-204ENST00000354497 SCUBE1Q8IWY4 988 aa10.52□□□□□ -0.73
RTN3-204ENST00000354497 RHOT2Q8IXI1 618 aa10.52□□□□□ -0.73
RTN3-204ENST00000354497 OR5M3Q8NGP4 307 aa10.52□□□□□ -0.73
RTN3-204ENST00000354497 OR10Q1Q8NGQ4 319 aa10.52□□□□□ -0.73
RTN3-204ENST00000354497 OR2A1Q8NGT9 310 aa10.52□□□□□ -0.73
RTN3-204ENST00000354497 OR9A4Q8NGU2 314 aa10.52□□□□□ -0.73
RTN3-204ENST00000354497 GOT1L1Q8NHS2 421 aaPredicted RBP10.52□□□□□ -0.73
RTN3-204ENST00000354497 TMEM125Q96AQ2 219 aa10.52□□□□□ -0.73
RTN3-204ENST00000354497 DESI2Q9BSY9 194 aa10.52□□□□□ -0.73
RTN3-204ENST00000354497 CLEC4MQ9H2X3 399 aaPredicted RBP10.52□□□□□ -0.73
RTN3-204ENST00000354497 DCLRE1BQ9H816 532 aa10.52□□□□□ -0.73
RTN3-204ENST00000354497 MRPS30Q9NP92 439 aaKnown RBP10.52□□□□□ -0.73
RTN3-204ENST00000354497 ABCF3Q9NUQ8 709 aa10.52□□□□□ -0.73
RTN3-204ENST00000354497 ZNF358Q9NW07 568 aa10.52□□□□□ -0.73
RTN3-204ENST00000354497 HCN3Q9P1Z3 774 aa10.52□□□□□ -0.73
RTN3-204ENST00000354497 PCYOX1Q9UHG3 505 aa10.52□□□□□ -0.73
RTN3-204ENST00000354497 EDARQ9UNE0 448 aa10.52□□□□□ -0.73
RTN3-204ENST00000354497 PRRC2AP48634 2157 aaKnown RBP10.52□□□□□ -0.73
RTN3-204ENST00000354497 APOC4-APOC2K7ER74 178 aa10.51□□□□□ -0.73
RTN3-204ENST00000354497 PROM1O43490 865 aa10.51□□□□□ -0.73
RTN3-204ENST00000354497 IDH3BO43837 385 aa10.51□□□□□ -0.73
RTN3-204ENST00000354497 HS6ST1O60243 411 aa10.51□□□□□ -0.73
RTN3-204ENST00000354497 KLK8O60259 260 aa10.51□□□□□ -0.73
RTN3-204ENST00000354497 GPC4O75487 556 aa10.51□□□□□ -0.73
RTN3-204ENST00000354497 SERPINB7O75635 380 aa10.51□□□□□ -0.73
RTN3-204ENST00000354497 CTAG2O75638 210 aa10.51□□□□□ -0.73
RTN3-204ENST00000354497 GOT2P00505 430 aaKnown RBP10.51□□□□□ -0.73
RTN3-204ENST00000354497 APOC2P02655 101 aa10.51□□□□□ -0.73
RTN3-204ENST00000354497 RPA3P35244 121 aaPredicted RBP10.51□□□□□ -0.73
RTN3-204ENST00000354497 VHLP40337 213 aa10.51□□□□□ -0.73
RTN3-204ENST00000354497 ADARP55265 1226 aaKnown RBP10.51□□□□□ -0.73
RTN3-204ENST00000354497 NUP107P57740 925 aa10.51□□□□□ -0.73
RTN3-204ENST00000354497 EIF3EP60228 445 aaKnown RBP10.51□□□□□ -0.73
RTN3-204ENST00000354497 NDUFA9Q16795 377 aa10.51□□□□□ -0.73
RTN3-204ENST00000354497 ZNF468Q5VIY5 522 aaPredicted RBP10.51□□□□□ -0.73
RTN3-204ENST00000354497 GARNL3Q5VVW2 1013 aa10.51□□□□□ -0.73
RTN3-204ENST00000354497 PAPD4Q6PIY7 484 aaKnown RBP10.51□□□□□ -0.73
RTN3-204ENST00000354497 SUSD1Q6UWL2 747 aa10.51□□□□□ -0.73
RTN3-204ENST00000354497 Q6ZNX1 250 aa10.51□□□□□ -0.73
RTN3-204ENST00000354497 M1APQ8TC57 530 aa10.51□□□□□ -0.73
RTN3-204ENST00000354497 ACMSDQ8TDX5 336 aa10.51□□□□□ -0.73
RTN3-204ENST00000354497 NUDT8Q8WV74 236 aa10.51□□□□□ -0.73
RTN3-204ENST00000354497 KLHL29Q96CT2 875 aa10.51□□□□□ -0.73
RTN3-204ENST00000354497 SPATA13Q96N96 652 aa10.51□□□□□ -0.73
RTN3-204ENST00000354497 PPP1R2P1Q96PQ5 205 aa10.51□□□□□ -0.73
RTN3-204ENST00000354497 OLFM1Q99784 485 aa10.51□□□□□ -0.73
RTN3-204ENST00000354497 CCT7Q99832 543 aa10.51□□□□□ -0.73
RTN3-204ENST00000354497 RBCK1Q9BYM8 510 aa10.51□□□□□ -0.73
RTN3-204ENST00000354497 SYNPO2LQ9H987 977 aa10.51□□□□□ -0.73
RTN3-204ENST00000354497 ARNT2Q9HBZ2 717 aa10.51□□□□□ -0.73
RTN3-204ENST00000354497 PPANQ9NQ55 473 aaKnown RBP10.51□□□□□ -0.73
RTN3-204ENST00000354497 SAMD15Q9P1V8 674 aa10.51□□□□□ -0.73
RTN3-204ENST00000354497 ZMAT5Q9UDW3 170 aaKnown RBP10.51□□□□□ -0.73
RTN3-204ENST00000354497 KLK4Q9Y5K2 254 aa10.51□□□□□ -0.73
RTN3-204ENST00000354497 HRH3Q9Y5N1 445 aa10.51□□□□□ -0.73
RTN3-204ENST00000354497 ALG6Q9Y672 507 aa10.51□□□□□ -0.73
RTN3-204ENST00000354497 A0A1W2PPV9 198 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 KIAA1324LA8MWY0 1029 aaPredicted RBP10.5□□□□□ -0.73
RTN3-204ENST00000354497 P2RX6O15547 441 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 C1orf105O95561 183 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 GYPCP04921 128 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms