RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 MYOFQ9NZM1 2061 aa23.51■■□□□ 1.35
CPNE1-202ENST00000352393 GRM6O15303 877 aa23.5■■□□□ 1.35
CPNE1-202ENST00000352393 SRPRAP08240 638 aaKnown RBP23.5■■□□□ 1.35
CPNE1-202ENST00000352393 CYP4F2P78329 520 aa23.5■■□□□ 1.35
CPNE1-202ENST00000352393 CRB2Q5IJ48 1285 aa23.5■■□□□ 1.35
CPNE1-202ENST00000352393 HENMT1Q5T8I9 393 aaKnown RBP23.5■■□□□ 1.35
CPNE1-202ENST00000352393 ASTLQ6HA08 431 aaPredicted RBP23.5■■□□□ 1.35
CPNE1-202ENST00000352393 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.5■■□□□ 1.351e-8■■□□□ 11.7
CPNE1-202ENST00000352393 TRAM1L1Q8N609 369 aa23.5■■□□□ 1.35
CPNE1-202ENST00000352393 TIFAQ96CG3 184 aa23.5■■□□□ 1.35
CPNE1-202ENST00000352393 FTSJ1Q9UET6 329 aa23.5■■□□□ 1.35
CPNE1-202ENST00000352393 HCN4Q9Y3Q4 1203 aa23.5■■□□□ 1.35
CPNE1-202ENST00000352393 DOCK6Q96HP0 2047 aa23.5■■□□□ 1.35
CPNE1-202ENST00000352393 SLC5A10A0PJK1 596 aa23.5■■□□□ 1.35
CPNE1-202ENST00000352393 EFCAB10A6NFE3 127 aa23.5■■□□□ 1.35
CPNE1-202ENST00000352393 QSOX1O00391 747 aa23.5■■□□□ 1.35
CPNE1-202ENST00000352393 PCDH17O14917 1159 aa23.5■■□□□ 1.35
CPNE1-202ENST00000352393 SNX4O95219 450 aa23.5■■□□□ 1.35
CPNE1-202ENST00000352393 OXSR1O95747 527 aaPredicted RBP23.5■■□□□ 1.35
CPNE1-202ENST00000352393 ALOX12P18054 663 aa23.5■■□□□ 1.35
CPNE1-202ENST00000352393 HMGA2P52926 109 aa23.5■■□□□ 1.35
CPNE1-202ENST00000352393 CTSCP53634 463 aa23.5■■□□□ 1.35
CPNE1-202ENST00000352393 CCDC92Q53HC0 331 aaPredicted RBP23.5■■□□□ 1.35
CPNE1-202ENST00000352393 CYP4Z2PQ8N1L4 340 aa23.5■■□□□ 1.35
CPNE1-202ENST00000352393 MAPKAP1Q9BPZ7 522 aa23.5■■□□□ 1.35
CPNE1-202ENST00000352393 CNOT2Q9NZN8 540 aaKnown RBP23.5■■□□□ 1.35
CPNE1-202ENST00000352393 NFKBIL1Q9UBC1 381 aaPredicted RBP23.5■■□□□ 1.35
CPNE1-202ENST00000352393 CAB39Q9Y376 341 aaPredicted RBP23.5■■□□□ 1.35
CPNE1-202ENST00000352393 PRAMEF33A0A0G2JMD5 474 aa23.49■■□□□ 1.35
CPNE1-202ENST00000352393 NRG2O14511 850 aaPredicted RBP23.49■■□□□ 1.35
CPNE1-202ENST00000352393 PRAMEF10O60809 474 aa23.49■■□□□ 1.35
CPNE1-202ENST00000352393 FURINP09958 794 aa23.49■■□□□ 1.35
CPNE1-202ENST00000352393 CYP2A6P11509 494 aaPredicted RBP23.49■■□□□ 1.35
CPNE1-202ENST00000352393 ETV3P41162 512 aa23.49■■□□□ 1.35
CPNE1-202ENST00000352393 PCBP3P57721 371 aaKnown RBP23.49■■□□□ 1.35
CPNE1-202ENST00000352393 CDK6Q00534 326 aa23.49■■□□□ 1.35
CPNE1-202ENST00000352393 PTGES3Q15185 160 aaKnown RBP23.49■■□□□ 1.35
CPNE1-202ENST00000352393 CARTPTQ16568 116 aa23.49■■□□□ 1.35
CPNE1-202ENST00000352393 MPEG1Q2M385 716 aa23.49■■□□□ 1.35
CPNE1-202ENST00000352393 ARMCX6Q7L4S7 300 aa23.49■■□□□ 1.35
CPNE1-202ENST00000352393 COMMD6Q7Z4G1 85 aa23.49■■□□□ 1.35
CPNE1-202ENST00000352393 TMPRSS11BQ86T26 416 aa23.49■■□□□ 1.35
CPNE1-202ENST00000352393 ATCAYQ86WG3 371 aa23.49■■□□□ 1.35
CPNE1-202ENST00000352393 SLC39A11Q8N1S5 342 aa23.49■■□□□ 1.35
CPNE1-202ENST00000352393 CIDECQ96AQ7 238 aaPredicted RBP23.49■■□□□ 1.35
CPNE1-202ENST00000352393 OR5M11Q96RB7 305 aa23.49■■□□□ 1.35
CPNE1-202ENST00000352393 RIOK2Q9BVS4 552 aaKnown RBP23.49■■□□□ 1.35
CPNE1-202ENST00000352393 MKLN1Q9UL63 735 aa23.49■■□□□ 1.35
CPNE1-202ENST00000352393 SH3D21A4FU49 640 aa23.48■■□□□ 1.35
CPNE1-202ENST00000352393 WASH3PC4AMC7 463 aa23.48■■□□□ 1.35
CPNE1-202ENST00000352393 KIAA0513O60268 411 aa23.48■■□□□ 1.35
CPNE1-202ENST00000352393 GPR37L1O60883 481 aa23.48■■□□□ 1.35
CPNE1-202ENST00000352393 HSMCR30P0CW71 290 aa23.48■■□□□ 1.35
CPNE1-202ENST00000352393 PIK3CBP42338 1070 aa23.48■■□□□ 1.35
CPNE1-202ENST00000352393 CASP3P42574 277 aa23.48■■□□□ 1.35
CPNE1-202ENST00000352393 PRIM2P49643 509 aa23.48■■□□□ 1.35
CPNE1-202ENST00000352393 CDC42P60953 191 aa23.48■■□□□ 1.35
CPNE1-202ENST00000352393 SP3Q02447 781 aa23.48■■□□□ 1.35
CPNE1-202ENST00000352393 ZNF630Q2M218 657 aaPredicted RBP23.48■■□□□ 1.35
CPNE1-202ENST00000352393 CYP27C1Q4G0S4 372 aa23.48■■□□□ 1.35
CPNE1-202ENST00000352393 TRIM40Q6P9F5 258 aa23.48■■□□□ 1.35
CPNE1-202ENST00000352393 BRAT1Q6PJG6 821 aa23.48■■□□□ 1.35
CPNE1-202ENST00000352393 CCDC190Q86UF4 302 aa23.48■■□□□ 1.35
CPNE1-202ENST00000352393 RASGEF1AQ8N9B8 481 aa23.48■■□□□ 1.35
CPNE1-202ENST00000352393 REPS1Q96D71 796 aa23.48■■□□□ 1.35
CPNE1-202ENST00000352393 TMEM169Q96HH4 297 aa23.48■■□□□ 1.35
CPNE1-202ENST00000352393 CORO1BQ9BR76 489 aa23.48■■□□□ 1.35
CPNE1-202ENST00000352393 MIR1-1HGQ9H1L0 117 aa23.48■■□□□ 1.35
CPNE1-202ENST00000352393 PRM3Q9NNZ6 103 aa23.48■■□□□ 1.35
CPNE1-202ENST00000352393 ENOPH1Q9UHY7 261 aa23.48■■□□□ 1.35
CPNE1-202ENST00000352393 KCNE2Q9Y6J6 123 aa23.48■■□□□ 1.35
CPNE1-202ENST00000352393 ARRDC5A6NEK1 342 aa23.48■■□□□ 1.35
CPNE1-202ENST00000352393 ZAR1LA6NP61 321 aa23.48■■□□□ 1.35
CPNE1-202ENST00000352393 LEFTY2O00292 366 aa23.48■■□□□ 1.35
CPNE1-202ENST00000352393 KMOO15229 486 aa23.48■■□□□ 1.35
CPNE1-202ENST00000352393 CCNB2O95067 398 aa23.48■■□□□ 1.35
CPNE1-202ENST00000352393 URODP06132 367 aa23.48■■□□□ 1.35
CPNE1-202ENST00000352393 POLR2EP19388 210 aaKnown RBP23.48■■□□□ 1.35
CPNE1-202ENST00000352393 KRR1Q13601 381 aaKnown RBP23.48■■□□□ 1.35
CPNE1-202ENST00000352393 ZNF362Q5T0B9 420 aaPredicted RBP23.48■■□□□ 1.35
CPNE1-202ENST00000352393 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.48■■□□□ 1.35
CPNE1-202ENST00000352393 TMC8Q8IU68 726 aa23.48■■□□□ 1.35
CPNE1-202ENST00000352393 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.48■■□□□ 1.35
CPNE1-202ENST00000352393 OR2A12Q8NGT7 310 aa23.48■■□□□ 1.35
CPNE1-202ENST00000352393 GTPBP3Q969Y2 492 aaKnown RBP23.48■■□□□ 1.35
CPNE1-202ENST00000352393 ZSCAN5AQ9BUG6 496 aa23.48■■□□□ 1.35
CPNE1-202ENST00000352393 HOXD1Q9GZZ0 328 aa23.48■■□□□ 1.35
CPNE1-202ENST00000352393 CFL2Q9Y281 166 aa23.48■■□□□ 1.35
CPNE1-202ENST00000352393 ENPP4Q9Y6X5 453 aa23.48■■□□□ 1.35
CPNE1-202ENST00000352393 KIF26AQ9ULI4 1882 aaPredicted RBP23.47■■□□□ 1.35
CPNE1-202ENST00000352393 ZW10O43264 779 aa23.47■■□□□ 1.35
CPNE1-202ENST00000352393 ASNA1O43681 348 aa23.47■■□□□ 1.35
CPNE1-202ENST00000352393 RECKO95980 971 aa23.47■■□□□ 1.35
CPNE1-202ENST00000352393 CXCL10P02778 98 aa23.47■■□□□ 1.35
CPNE1-202ENST00000352393 ARAFP10398 606 aa23.47■■□□□ 1.35
CPNE1-202ENST00000352393 POU2F1P14859 743 aa23.47■■□□□ 1.35
CPNE1-202ENST00000352393 PRLHRP49683 370 aa23.47■■□□□ 1.35
CPNE1-202ENST00000352393 MC1RQ01726 317 aa23.47■■□□□ 1.35
CPNE1-202ENST00000352393 DOC2BQ14184 412 aa23.47■■□□□ 1.35
CPNE1-202ENST00000352393 TSTQ16762 297 aaKnown RBP23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms