RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 CAPZA2P47755 286 aa12.74□□□□□ -0.37
IFT88-202ENST00000351808 GDI2P50395 445 aaKnown RBP12.74□□□□□ -0.37
IFT88-202ENST00000351808 RABGGTBP53611 331 aa12.74□□□□□ -0.37
IFT88-202ENST00000351808 CTBP2P56545 445 aa12.74□□□□□ -0.37
IFT88-202ENST00000351808 DSC1Q08554 894 aa12.74□□□□□ -0.37
IFT88-202ENST00000351808 GPR176Q14439 515 aa12.74□□□□□ -0.37
IFT88-202ENST00000351808 TEAD4Q15561 434 aa12.74□□□□□ -0.37
IFT88-202ENST00000351808 RGS7BPQ6MZT1 257 aaPredicted RBP12.74□□□□□ -0.37
IFT88-202ENST00000351808 TMIGD1Q6UXZ0 262 aa12.74□□□□□ -0.37
IFT88-202ENST00000351808 OR4N4Q8N0Y3 316 aa12.74□□□□□ -0.37
IFT88-202ENST00000351808 SAMD11Q96NU1 681 aa12.74□□□□□ -0.37
IFT88-202ENST00000351808 PPP1R16BQ96T49 567 aa12.74□□□□□ -0.37
IFT88-202ENST00000351808 PIP5K1AQ99755 562 aa12.74□□□□□ -0.37
IFT88-202ENST00000351808 FAM126AQ9BYI3 521 aaPredicted RBP12.74□□□□□ -0.37
IFT88-202ENST00000351808 BCL2L14Q9BZR8 327 aa12.74□□□□□ -0.37
IFT88-202ENST00000351808 ZMYM5Q9UJ78 669 aa12.74□□□□□ -0.37
IFT88-202ENST00000351808 TNFSF13BQ9Y275 285 aa12.74□□□□□ -0.37
IFT88-202ENST00000351808 A8MXK9 166 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 E2F3O00716 465 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 WNT9AO14904 365 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 CCNB2O95067 398 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 LPLP06858 475 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 HBQ1P09105 142 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 DGKEP52429 567 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 HMGCS1Q01581 520 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 DSG2Q14126 1118 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 NHLRC3Q5JS37 347 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 PAQR6Q6TCH4 344 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 RNF180Q86T96 592 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 SP8Q8IXZ3 490 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 ATPAF2Q8N5M1 289 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 OR4D10Q8NGI6 311 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 SOSTQ9BQB4 213 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 KATNB1Q9BVA0 655 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 TINAGL1Q9GZM7 467 aaPredicted RBP12.73□□□□□ -0.37
IFT88-202ENST00000351808 CXCL16Q9H2A7 254 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 KCTD5Q9NXV2 234 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 ACTR10Q9NZ32 417 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 PTTG3PQ9NZH4 202 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 TRPM5Q9NZQ8 1165 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 TINAGQ9UJW2 476 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 PCOLCE2Q9UKZ9 415 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 SPATA2Q9UM82 520 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 YARS2Q9Y2Z4 477 aaKnown RBP12.73□□□□□ -0.37
IFT88-202ENST00000351808 LSM2Q9Y333 95 aaKnown RBP12.73□□□□□ -0.37
IFT88-202ENST00000351808 LCHNA4D1U4 455 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 ABCD4O14678 606 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 LRRTM2O43300 516 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 TPST2O60704 377 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 RHOBTB1O94844 696 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 OLFM2O95897 454 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 DHFRP00374 187 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 LALBAP00709 142 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 PRSS56P0CW18 603 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 RPL34P49207 117 aaKnown RBP12.73□□□□□ -0.37
IFT88-202ENST00000351808 HK3P52790 923 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 C18orf21Q32NC0 220 aaPredicted RBP12.73□□□□□ -0.37
IFT88-202ENST00000351808 GPR33Q49SQ1 333 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 PIAS4Q8N2W9 510 aaPredicted RBP12.73□□□□□ -0.37
IFT88-202ENST00000351808 OR10G2Q8NGC3 310 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 OR52P1PQ8NH57 321 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 POP5Q969H6 163 aaKnown RBP12.73□□□□□ -0.37
IFT88-202ENST00000351808 MTFMTQ96DP5 389 aaKnown RBP12.73□□□□□ -0.37
IFT88-202ENST00000351808 MS4A3Q96HJ5 214 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 EPYCQ99645 322 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 TCF25Q9BQ70 676 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 PRR14Q9BWN1 585 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 GPR63Q9BZJ6 419 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 HDHD2Q9H0R4 259 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 NT5DC2Q9H857 520 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 RNF19AQ9NV58 838 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 NDUFB11Q9NX14 153 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 RPS6KA6Q9UK32 745 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 FBXW11Q9UKB1 542 aa12.73□□□□□ -0.37
IFT88-202ENST00000351808 J3KR12 359 aa12.72□□□□□ -0.37
IFT88-202ENST00000351808 POU3F2P20265 443 aaPredicted RBP12.72□□□□□ -0.37
IFT88-202ENST00000351808 SLC6A1P30531 599 aa12.72□□□□□ -0.37
IFT88-202ENST00000351808 BAG6P46379 1132 aa12.72□□□□□ -0.37
IFT88-202ENST00000351808 DCDC1P59894 354 aa12.72□□□□□ -0.37
IFT88-202ENST00000351808 FTMTQ8N4E7 242 aa12.72□□□□□ -0.37
IFT88-202ENST00000351808 ZNF382Q96SR6 550 aa12.72□□□□□ -0.37
IFT88-202ENST00000351808 SLC19A3Q9BZV2 496 aa12.72□□□□□ -0.37
IFT88-202ENST00000351808 ZNF436Q9C0F3 470 aaPredicted RBP12.72□□□□□ -0.37
IFT88-202ENST00000351808 OR51J1Q9H342 316 aa12.72□□□□□ -0.37
IFT88-202ENST00000351808 ZNF768Q9H5H4 540 aaKnown RBP12.72□□□□□ -0.37
IFT88-202ENST00000351808 SERHLQ9NQF3 203 aa12.72□□□□□ -0.37
IFT88-202ENST00000351808 NUDT15Q9NV35 164 aa12.72□□□□□ -0.37
IFT88-202ENST00000351808 DDIT4Q9NX09 232 aa12.72□□□□□ -0.37
IFT88-202ENST00000351808 CNOT2Q9NZN8 540 aaKnown RBP12.72□□□□□ -0.37
IFT88-202ENST00000351808 GLYATL1P3A0A0U1RQE8 302 aa12.72□□□□□ -0.37
IFT88-202ENST00000351808 TNFRSF11BO00300 401 aa12.72□□□□□ -0.37
IFT88-202ENST00000351808 PDCD5O14737 125 aa12.72□□□□□ -0.37
IFT88-202ENST00000351808 BEST1O76090 585 aa12.72□□□□□ -0.37
IFT88-202ENST00000351808 RHCEP18577 417 aa12.72□□□□□ -0.37
IFT88-202ENST00000351808 SDHBP21912 280 aa12.72□□□□□ -0.37
IFT88-202ENST00000351808 PBX3P40426 434 aa12.72□□□□□ -0.37
IFT88-202ENST00000351808 AVPR1BP47901 424 aa12.72□□□□□ -0.37
IFT88-202ENST00000351808 PXNP49023 591 aaPredicted RBP12.72□□□□□ -0.37
IFT88-202ENST00000351808 PPIGQ13427 754 aaKnown RBP eCLIP12.72□□□□□ -0.373e-6■■■□□ 15.4
IFT88-202ENST00000351808 MPEG1Q2M385 716 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms