RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 SUV39H1O43463 412 aa15.95■□□□□ 0.14
SAMM50-201ENST00000350028 ADAM23O75077 832 aa15.95■□□□□ 0.14
SAMM50-201ENST00000350028 EGFP01133 1207 aa15.95■□□□□ 0.14
SAMM50-201ENST00000350028 DDCP20711 480 aa15.95■□□□□ 0.14
SAMM50-201ENST00000350028 COL9A1P20849 921 aa15.95■□□□□ 0.14
SAMM50-201ENST00000350028 FPR1P21462 350 aa15.95■□□□□ 0.14
SAMM50-201ENST00000350028 SHMT2P34897 504 aa15.95■□□□□ 0.14
SAMM50-201ENST00000350028 HLCSP50747 726 aa15.95■□□□□ 0.14
SAMM50-201ENST00000350028 MAPK12P53778 367 aa15.95■□□□□ 0.14
SAMM50-201ENST00000350028 CYP4F2P78329 520 aa15.95■□□□□ 0.14
SAMM50-201ENST00000350028 CSNK1G2P78368 415 aa15.95■□□□□ 0.14
SAMM50-201ENST00000350028 SFSWAPQ12872 951 aaKnown RBP15.95■□□□□ 0.14
SAMM50-201ENST00000350028 KCNAB2Q13303 367 aa15.95■□□□□ 0.14
SAMM50-201ENST00000350028 ELOAQ14241 798 aaKnown RBP15.95■□□□□ 0.14
SAMM50-201ENST00000350028 UAP1L1Q3KQV9 507 aa15.95■□□□□ 0.14
SAMM50-201ENST00000350028 RBM48Q5RL73 367 aaKnown RBP15.95■□□□□ 0.14
SAMM50-201ENST00000350028 TTLQ8NG68 377 aa15.95■□□□□ 0.14
SAMM50-201ENST00000350028 RGMAQ96B86 450 aa15.95■□□□□ 0.14
SAMM50-201ENST00000350028 TM4SF18Q96CE8 201 aa15.95■□□□□ 0.14
SAMM50-201ENST00000350028 NMD3Q96D46 503 aaKnown RBP15.95■□□□□ 0.14
SAMM50-201ENST00000350028 SORBS1Q9BX66 1292 aaKnown RBP15.95■□□□□ 0.14
SAMM50-201ENST00000350028 ZNF717Q9BY31 904 aaPredicted RBP15.95■□□□□ 0.14
SAMM50-201ENST00000350028 ING2Q9H160 280 aa15.95■□□□□ 0.14
SAMM50-201ENST00000350028 SLC6A17Q9H1V8 727 aa15.95■□□□□ 0.14
SAMM50-201ENST00000350028 ZNF576Q9H609 170 aa15.95■□□□□ 0.14
SAMM50-201ENST00000350028 TMEM38AQ9H6F2 299 aa15.95■□□□□ 0.14
SAMM50-201ENST00000350028 VNN3Q9NY84 501 aa15.95■□□□□ 0.14
SAMM50-201ENST00000350028 ABCG2Q9UNQ0 655 aa15.95■□□□□ 0.14
SAMM50-201ENST00000350028 FEZF1A0PJY2 475 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 H3BSA7 217 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 OR1F1O43749 312 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 KDM1AO60341 852 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 CLEC3AO75596 197 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 ETS2P15036 469 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 PRKACGP22612 351 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 UQCRC2P22695 453 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 CHI3L1P36222 383 aaPredicted RBP15.94■□□□□ 0.14
SAMM50-201ENST00000350028 TPD52P55327 224 aaPredicted RBP15.94■□□□□ 0.14
SAMM50-201ENST00000350028 VLDLRP98155 873 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 PPP1R8Q12972 351 aaKnown RBP15.94■□□□□ 0.14
SAMM50-201ENST00000350028 LSAMPQ13449 338 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 IL18R1Q13478 541 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 CLCA4Q14CN2 919 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 HEPACAMQ14CZ8 416 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 PRSS53Q2L4Q9 553 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 ANGPTL8Q6UXH0 198 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 ZNF852Q6ZMS4 543 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 USP30Q70CQ3 517 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 VTCN1Q7Z7D3 282 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 GALNT10Q86SR1 603 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 OR5P2Q8WZ92 322 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 SIPA1Q96FS4 1042 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 DOHHQ9BU89 302 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 AMBRA1Q9C0C7 1298 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 SLC6A16Q9GZN6 736 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 C1GALT1Q9NS00 363 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 DDX18Q9NVP1 670 aaKnown RBP15.94■□□□□ 0.14
SAMM50-201ENST00000350028 GPATCH2Q9NW75 528 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 TAAR2Q9P1P5 351 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 RAPGEFL1Q9UHV5 662 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 TMEFF2Q9UIK5 374 aaPredicted RBP15.94■□□□□ 0.14
SAMM50-201ENST00000350028 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.94■□□□□ 0.14
SAMM50-201ENST00000350028 PLEKHM1Q9Y4G2 1056 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 HEBP2Q9Y5Z4 205 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 U3KQV3 271 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 TRBC2A0A5B9 178 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 PDZK1P1A8MUH7 402 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 hCG_2039718K7EN88 272 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 SLC16A6O15403 523 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 NDUFS4O43181 175 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 ETFAP13804 333 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 MAT2AP31153 395 aaKnown RBP15.94■□□□□ 0.14
SAMM50-201ENST00000350028 PRIM2P49643 509 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 RPS6KA3P51812 740 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 ITGA1P56199 1179 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 KIAA1024LP59773 190 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 TRA2BP62995 288 aaKnown RBP15.94■□□□□ 0.14
SAMM50-201ENST00000350028 ABATP80404 500 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 MRPS21P82921 87 aaKnown RBP15.94■□□□□ 0.14
SAMM50-201ENST00000350028 ROR2Q01974 943 aaKnown RBP15.94■□□□□ 0.14
SAMM50-201ENST00000350028 ZNF630Q2M218 657 aaPredicted RBP15.94■□□□□ 0.14
SAMM50-201ENST00000350028 COX20Q5RI15 118 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 EP400NLQ6ZTU2 488 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 CCDC80Q76M96 950 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 NUDT13Q86X67 352 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 SLC30A8Q8IWU4 369 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 OR2A1Q8NGT9 310 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 HDAC2Q92769 488 aaKnown RBP15.94■□□□□ 0.14
SAMM50-201ENST00000350028 ZNF764Q96H86 408 aaPredicted RBP15.94■□□□□ 0.14
SAMM50-201ENST00000350028 TPD52L3Q96J77 140 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 NECTIN4Q96NY8 510 aa15.94■□□□□ 0.14
SAMM50-201ENST00000350028 LOC100130705A0A1B0GUX0 176 aa15.93■□□□□ 0.14
SAMM50-201ENST00000350028 MYO1GB0I1T2 1018 aa15.93■□□□□ 0.14
SAMM50-201ENST00000350028 SLC31A1O15431 190 aa15.93■□□□□ 0.14
SAMM50-201ENST00000350028 LATO43561 262 aa15.93■□□□□ 0.14
SAMM50-201ENST00000350028 GCM2O75603 506 aaPredicted RBP15.93■□□□□ 0.14
SAMM50-201ENST00000350028 ITGAMP11215 1152 aa15.93■□□□□ 0.14
SAMM50-201ENST00000350028 CDH2P19022 906 aaPredicted RBP15.93■□□□□ 0.14
SAMM50-201ENST00000350028 DRD1P21728 446 aa15.93■□□□□ 0.14
SAMM50-201ENST00000350028 TTKP33981 857 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms