RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 TCEAL9Q9UHQ7 104 aa10.25□□□□□ -0.77
CAPN3-203ENST00000349748 GLYATL1P3A0A0U1RQE8 302 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 MTMR11A4FU01 709 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 POM121BA6NF01 834 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 LY86O95711 162 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 SPP1P10451 314 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 APEHP13798 732 aaKnown RBP10.24□□□□□ -0.77
CAPN3-203ENST00000349748 CRYBB2P43320 205 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 ALDH9A1P49189 494 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 DCDC1P59894 354 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 SOX4Q06945 474 aaPredicted RBP10.24□□□□□ -0.77
CAPN3-203ENST00000349748 C9orf152Q5JTZ5 239 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 C3P1Q6ZMU1 363 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 CATSPERGQ6ZRH7 1159 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 BEND4Q6ZU67 534 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 ASB18Q6ZVZ8 466 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 C12orf40Q86WS4 652 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 STX12Q86Y82 276 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 MOSPD2Q8NHP6 518 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 SLC25A46Q96AG3 418 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 PABPC5Q96DU9 382 aaKnown RBP10.24□□□□□ -0.77
CAPN3-203ENST00000349748 MRPS24Q96EL2 167 aaKnown RBP10.24□□□□□ -0.77
CAPN3-203ENST00000349748 L3HYPDHQ96EM0 354 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 MNTQ99583 582 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 H2AFJQ9BTM1 129 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 PTDSS2Q9BVG9 487 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 PRMT8Q9NR22 394 aaPredicted RBP10.24□□□□□ -0.77
CAPN3-203ENST00000349748 MBD2Q9UBB5 411 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 CLCA2Q9UQC9 943 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 ENTPD4Q9Y227 616 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 SLC9A8Q9Y2E8 581 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 CFAP20Q9Y6A4 193 aaKnown RBP10.24□□□□□ -0.77
CAPN3-203ENST00000349748 ZNF670-ZNF695F2Z2N8 137 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 AIPO00170 330 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 TGM6O95932 706 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 IGHV2-70P01814 119 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 FGF4P08620 206 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 SFTPCP11686 197 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 MAZP56270 477 aaKnown RBP10.24□□□□□ -0.77
CAPN3-203ENST00000349748 HSD17B7P56937 341 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 CSNK2BP67870 215 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 EEF1A1P68104 462 aaKnown RBP10.24□□□□□ -0.77
CAPN3-203ENST00000349748 EEF1A2Q05639 463 aaKnown RBP10.24□□□□□ -0.77
CAPN3-203ENST00000349748 PWP1Q13610 501 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 OPCMLQ14982 345 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 EEF1A1P5Q5VTE0 462 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 RAB11FIP2Q7L804 512 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 SPATA19Q7Z5L4 167 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 ZER1Q7Z7L7 766 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 ISCA2Q86U28 154 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 PDZD3Q86UT5 571 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 OR2T35Q8NGX2 323 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 KHSRPQ92945 711 aaKnown RBP eCLIP10.24□□□□□ -0.77
CAPN3-203ENST00000349748 EXOSC8Q96B26 276 aaKnown RBP10.24□□□□□ -0.77
CAPN3-203ENST00000349748 TRIM43Q96BQ3 446 aaPredicted RBP10.24□□□□□ -0.77
CAPN3-203ENST00000349748 NARS2Q96I59 477 aaKnown RBP10.24□□□□□ -0.77
CAPN3-203ENST00000349748 HRASLS5Q96KN8 279 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 TMEM43Q9BTV4 400 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 NKX6-2Q9C056 277 aaPredicted RBP10.24□□□□□ -0.77
CAPN3-203ENST00000349748 MCOLN1Q9GZU1 580 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 GBA2Q9HCG7 927 aaPredicted RBP10.24□□□□□ -0.77
CAPN3-203ENST00000349748 NUDT15Q9NV35 164 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 SPHK1Q9NYA1 384 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 KCNK7Q9Y2U2 307 aa10.24□□□□□ -0.77
CAPN3-203ENST00000349748 OR2W5A6NFC9 320 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 MPTX1A8MV57 137 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 OAZ2O95190 189 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 URODP06132 367 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 SMPD1P17405 629 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 SYN1P17600 705 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 NFKB1P19838 968 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 CYP2B6P20813 491 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 JAK3P52333 1124 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 KCTD11Q693B1 232 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 SLC6A19Q695T7 634 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 NOTUMQ6P988 496 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 GPR149Q86SP6 731 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 FAM131BQ86XD5 332 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 ADGRF3Q8IZF5 1079 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 ARL6IP6Q8N6S5 226 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 IPMKQ8NFU5 416 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 TMEM143Q96AN5 459 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 CRELD1Q96HD1 420 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 MSLNLQ96KJ4 702 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 CYP2S1Q96SQ9 504 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 PDCD2LQ9BRP1 358 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 BRINP2Q9C0B6 783 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 PPP1R3EQ9H7J1 279 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 PLCXD1Q9NUJ7 323 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 IMPAD1Q9NX62 359 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 SEC14L4Q9UDX3 406 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 USP3Q9Y6I4 520 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 KIAA1217Q5T5P2 1943 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 SYNJ2BP-COX16A0A087WUM0 186 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 CHURC1-FNTBB4DL54 471 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 SCELO95171 688 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 HLA-DQB1P01920 261 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 CD63P08962 238 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 OR56A5P0C7T3 313 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 G6PDP11413 515 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 1106.7 ms