RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 HUS1BQ8NHY5 278 aa20.82■□□□□ 0.92
SNX3-202ENST00000349379 WDR20Q8TBZ3 569 aa20.82■□□□□ 0.92
SNX3-202ENST00000349379 FAR2Q96K12 515 aa20.82■□□□□ 0.92
SNX3-202ENST00000349379 F2RL3Q96RI0 385 aa20.82■□□□□ 0.92
SNX3-202ENST00000349379 RBCK1Q9BYM8 510 aa20.82■□□□□ 0.92
SNX3-202ENST00000349379 ZNF700Q9H0M5 742 aa20.82■□□□□ 0.92
SNX3-202ENST00000349379 ZNF552Q9H707 407 aaPredicted RBP20.82■□□□□ 0.92
SNX3-202ENST00000349379 RNF11Q9Y3C5 154 aa20.82■□□□□ 0.92
SNX3-202ENST00000349379 A0A088AWK7 358 aa20.81■□□□□ 0.92
SNX3-202ENST00000349379 NSG1A0A0A6YYJ2 146 aa20.81■□□□□ 0.92
SNX3-202ENST00000349379 OR2W5A6NFC9 320 aa20.81■□□□□ 0.92
SNX3-202ENST00000349379 MAGEB17A8MXT2 336 aa20.81■□□□□ 0.92
SNX3-202ENST00000349379 SCELO95171 688 aa20.81■□□□□ 0.92
SNX3-202ENST00000349379 CLDN9O95484 217 aa20.81■□□□□ 0.92
SNX3-202ENST00000349379 PCNAP12004 261 aa20.81■□□□□ 0.92
SNX3-202ENST00000349379 RNH1P13489 461 aaKnown RBP20.81■□□□□ 0.92
SNX3-202ENST00000349379 KRT15P19012 456 aa20.81■□□□□ 0.92
SNX3-202ENST00000349379 ZNF10P21506 573 aaPredicted RBP20.81■□□□□ 0.92
SNX3-202ENST00000349379 JAK1P23458 1154 aa20.81■□□□□ 0.92
SNX3-202ENST00000349379 ATP5F1P24539 256 aaPredicted RBP20.81■□□□□ 0.92
SNX3-202ENST00000349379 CCNG1P51959 295 aa20.81■□□□□ 0.92
SNX3-202ENST00000349379 PLA2G16P53816 162 aa20.81■□□□□ 0.92
SNX3-202ENST00000349379 HERVK_113P63132 956 aa20.81■□□□□ 0.92
SNX3-202ENST00000349379 EEF1A2Q05639 463 aaKnown RBP20.81■□□□□ 0.92
SNX3-202ENST00000349379 SLC18A2Q05940 514 aa20.81■□□□□ 0.92
SNX3-202ENST00000349379 RUNX2Q13950 521 aa20.81■□□□□ 0.92
SNX3-202ENST00000349379 GGTA1PQ4G0N0 100 aa20.81■□□□□ 0.92
SNX3-202ENST00000349379 TMEM35AQ53FP2 167 aa20.81■□□□□ 0.92
SNX3-202ENST00000349379 VWA5B1Q5TIE3 1220 aa20.81■□□□□ 0.92
SNX3-202ENST00000349379 QSOX2Q6ZRP7 698 aa20.81■□□□□ 0.92
SNX3-202ENST00000349379 LANCL3Q6ZV70 420 aa20.81■□□□□ 0.92
SNX3-202ENST00000349379 HPS6Q86YV9 775 aa20.81■□□□□ 0.92
SNX3-202ENST00000349379 SRFBP1Q8NEF9 429 aaKnown RBP20.81■□□□□ 0.92
SNX3-202ENST00000349379 IMMP1LQ96LU5 166 aa20.81■□□□□ 0.92
SNX3-202ENST00000349379 CDK15Q96Q40 435 aa20.81■□□□□ 0.92
SNX3-202ENST00000349379 SERINC2Q96SA4 455 aa20.81■□□□□ 0.92
SNX3-202ENST00000349379 ERVK-6Q9BXR3 956 aa20.81■□□□□ 0.92
SNX3-202ENST00000349379 ZNF160Q9HCG1 818 aa20.81■□□□□ 0.92
SNX3-202ENST00000349379 DMRT3Q9NQL9 472 aa20.81■□□□□ 0.92
SNX3-202ENST00000349379 RIC8BQ9NVN3 520 aa20.81■□□□□ 0.92
SNX3-202ENST00000349379 C5AR2Q9P296 337 aa20.81■□□□□ 0.92
SNX3-202ENST00000349379 PPT2Q9UMR5 302 aa20.81■□□□□ 0.92
SNX3-202ENST00000349379 G3BP2Q9UN86 482 aaKnown RBP20.81■□□□□ 0.92
SNX3-202ENST00000349379 ZNF451Q9Y4E5 1061 aa20.81■□□□□ 0.92
SNX3-202ENST00000349379 CNTRLQ7Z7A1 2325 aa20.8■□□□□ 0.92
SNX3-202ENST00000349379 SUV39H1O43463 412 aa20.8■□□□□ 0.92
SNX3-202ENST00000349379 KLHL41O60662 606 aa20.8■□□□□ 0.92
SNX3-202ENST00000349379 CDC123O75794 336 aaPredicted RBP20.8■□□□□ 0.92
SNX3-202ENST00000349379 TGFB1P01137 390 aa20.8■□□□□ 0.92
SNX3-202ENST00000349379 CRHR1P34998 444 aa20.8■□□□□ 0.92
SNX3-202ENST00000349379 PRKAA2P54646 552 aa20.8■□□□□ 0.92
SNX3-202ENST00000349379 MTTPP55157 894 aa20.8■□□□□ 0.92
SNX3-202ENST00000349379 TGM3Q08188 693 aa20.8■□□□□ 0.92
SNX3-202ENST00000349379 CPSF6Q16630 551 aaKnown RBP eCLIP20.8■□□□□ 0.92
SNX3-202ENST00000349379 DEPDC1Q5TB30 811 aa20.8■□□□□ 0.92
SNX3-202ENST00000349379 MFSD4BQ5TF39 518 aa20.8■□□□□ 0.92
SNX3-202ENST00000349379 ZNF793Q6ZN11 406 aa20.8■□□□□ 0.92
SNX3-202ENST00000349379 ANKRD37Q7Z713 158 aa20.8■□□□□ 0.92
SNX3-202ENST00000349379 PTRH1Q86Y79 214 aaKnown RBP20.8■□□□□ 0.92
SNX3-202ENST00000349379 MYLK4Q86YV6 388 aaPredicted RBP20.8■□□□□ 0.92
SNX3-202ENST00000349379 RNF175Q8N4F7 328 aa20.8■□□□□ 0.92
SNX3-202ENST00000349379 METTL21AQ8WXB1 218 aa20.8■□□□□ 0.92
SNX3-202ENST00000349379 REPS1Q96D71 796 aa20.8■□□□□ 0.92
SNX3-202ENST00000349379 CMTM7Q96FZ5 175 aa20.8■□□□□ 0.92
SNX3-202ENST00000349379 KCNC2Q96PR1 638 aa20.8■□□□□ 0.92
SNX3-202ENST00000349379 TMEM237Q96Q45 408 aa20.8■□□□□ 0.92
SNX3-202ENST00000349379 WDR77Q9BQA1 342 aaPredicted RBP20.8■□□□□ 0.92
SNX3-202ENST00000349379 TBCDQ9BTW9 1192 aa20.8■□□□□ 0.92
SNX3-202ENST00000349379 ROPN1BQ9BZX4 212 aaPredicted RBP20.8■□□□□ 0.92
SNX3-202ENST00000349379 ROPN1Q9HAT0 212 aaPredicted RBP20.8■□□□□ 0.92
SNX3-202ENST00000349379 SEMA4BQ9NPR2 832 aaPredicted RBP20.8■□□□□ 0.92
SNX3-202ENST00000349379 PSD3Q9NYI0 1048 aa20.8■□□□□ 0.92
SNX3-202ENST00000349379 C19orf25Q9UFG5 118 aaPredicted RBP20.8■□□□□ 0.92
SNX3-202ENST00000349379 LGALS13Q9UHV8 139 aa20.8■□□□□ 0.92
SNX3-202ENST00000349379 ANAPC2Q9UJX6 822 aa20.8■□□□□ 0.92
SNX3-202ENST00000349379 ZNF462Q96JM2 2506 aa20.79■□□□□ 0.92
SNX3-202ENST00000349379 A0A1B0GTL3 188 aa20.79■□□□□ 0.92
SNX3-202ENST00000349379 B3GALT2O43825 422 aa20.79■□□□□ 0.92
SNX3-202ENST00000349379 TUBBP07437 444 aa20.79■□□□□ 0.92
SNX3-202ENST00000349379 ITGA3P26006 1051 aa20.79■□□□□ 0.92
SNX3-202ENST00000349379 CERS1P27544 350 aa20.79■□□□□ 0.92
SNX3-202ENST00000349379 ARFIP1P53367 373 aa20.79■□□□□ 0.92
SNX3-202ENST00000349379 RAB38P57729 211 aa20.79■□□□□ 0.92
SNX3-202ENST00000349379 RAPSNQ13702 412 aa20.79■□□□□ 0.92
SNX3-202ENST00000349379 ZRSR2Q15696 482 aaKnown RBP20.79■□□□□ 0.92
SNX3-202ENST00000349379 UNC50Q53HI1 259 aa20.79■□□□□ 0.92
SNX3-202ENST00000349379 ZNF678Q5SXM1 525 aa20.79■□□□□ 0.92
SNX3-202ENST00000349379 KHDRBS2Q5VWX1 349 aaKnown RBP20.79■□□□□ 0.92
SNX3-202ENST00000349379 CHSY3Q70JA7 882 aa20.79■□□□□ 0.92
SNX3-202ENST00000349379 RPS27LQ71UM5 84 aaKnown RBP20.79■□□□□ 0.92
SNX3-202ENST00000349379 CPEB2Q7Z5Q1 589 aaKnown RBP20.79■□□□□ 0.92
SNX3-202ENST00000349379 SLC22A9Q8IVM8 553 aa20.79■□□□□ 0.92
SNX3-202ENST00000349379 PARP9Q8IXQ6 854 aa20.79■□□□□ 0.92
SNX3-202ENST00000349379 TSLPQ969D9 159 aa20.79■□□□□ 0.92
SNX3-202ENST00000349379 ATP6V1E2Q96A05 226 aa20.79■□□□□ 0.92
SNX3-202ENST00000349379 L3HYPDHQ96EM0 354 aa20.79■□□□□ 0.92
SNX3-202ENST00000349379 TUBB6Q9BUF5 446 aa20.79■□□□□ 0.92
SNX3-202ENST00000349379 TMEM109Q9BVC6 243 aa20.79■□□□□ 0.92
SNX3-202ENST00000349379 ZNF225Q9UK10 706 aa20.79■□□□□ 0.92
SNX3-202ENST00000349379 DAPP1Q9UN19 280 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms