RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 TM4SF18Q96CE8 201 aa17.78■□□□□ 0.44
PTN-201ENST00000348225 TEFMQ96QE5 360 aaKnown RBP17.78■□□□□ 0.44
PTN-201ENST00000348225 OR2A5Q96R48 311 aa17.78■□□□□ 0.44
PTN-201ENST00000348225 CPPED1Q9BRF8 314 aaPredicted RBP17.78■□□□□ 0.44
PTN-201ENST00000348225 AICDAQ9GZX7 198 aa17.78■□□□□ 0.44
PTN-201ENST00000348225 STOML1Q9UBI4 398 aa17.78■□□□□ 0.44
PTN-201ENST00000348225 PILRAQ9UKJ1 303 aa17.78■□□□□ 0.44
PTN-201ENST00000348225 KNL1Q8NG31 2342 aa17.78■□□□□ 0.44
PTN-201ENST00000348225 A0A0J9YVX5 310 aa17.77■□□□□ 0.44
PTN-201ENST00000348225 RHPN2P1A8MT19 583 aa17.77■□□□□ 0.44
PTN-201ENST00000348225 CTSVO60911 334 aa17.77■□□□□ 0.44
PTN-201ENST00000348225 GUCY1B2O75343 617 aa17.77■□□□□ 0.44
PTN-201ENST00000348225 CPSF4O95639 269 aaKnown RBP17.77■□□□□ 0.44
PTN-201ENST00000348225 GSNP06396 782 aa17.77■□□□□ 0.44
PTN-201ENST00000348225 HOXB9P17482 250 aaPredicted RBP17.77■□□□□ 0.44
PTN-201ENST00000348225 CDH3P22223 829 aa17.77■□□□□ 0.44
PTN-201ENST00000348225 HIST1H1TP22492 207 aaPredicted RBP17.77■□□□□ 0.44
PTN-201ENST00000348225 CNR2P34972 360 aa17.77■□□□□ 0.44
PTN-201ENST00000348225 CDKN2CP42773 168 aa17.77■□□□□ 0.44
PTN-201ENST00000348225 LSSP48449 732 aa17.77■□□□□ 0.44
PTN-201ENST00000348225 EPHA4P54764 986 aa17.77■□□□□ 0.44
PTN-201ENST00000348225 SLC34A1Q06495 639 aa17.77■□□□□ 0.44
PTN-201ENST00000348225 SELPLGQ14242 412 aa17.77■□□□□ 0.44
PTN-201ENST00000348225 SLC9A5Q14940 896 aa17.77■□□□□ 0.44
PTN-201ENST00000348225 GTDC1Q4AE62 458 aa17.77■□□□□ 0.44
PTN-201ENST00000348225 AASDHQ4L235 1098 aaPredicted RBP17.77■□□□□ 0.44
PTN-201ENST00000348225 CEP68Q76N32 757 aa17.77■□□□□ 0.44
PTN-201ENST00000348225 PTRH1Q86Y79 214 aaKnown RBP17.77■□□□□ 0.44
PTN-201ENST00000348225 ZCCHC7Q8N3Z6 543 aaKnown RBP17.77■□□□□ 0.44
PTN-201ENST00000348225 ARL10Q8N8L6 244 aa17.77■□□□□ 0.44
PTN-201ENST00000348225 TNIP2Q8NFZ5 429 aa17.77■□□□□ 0.44
PTN-201ENST00000348225 PYDC1Q8WXC3 89 aa17.77■□□□□ 0.44
PTN-201ENST00000348225 MIEF2Q96C03 454 aa17.77■□□□□ 0.44
PTN-201ENST00000348225 TM4SF19Q96DZ7 209 aa17.77■□□□□ 0.44
PTN-201ENST00000348225 ZNF764Q96H86 408 aaPredicted RBP17.77■□□□□ 0.44
PTN-201ENST00000348225 FCRL4Q96PJ5 515 aa17.77■□□□□ 0.44
PTN-201ENST00000348225 MACROD1Q9BQ69 325 aa17.77■□□□□ 0.44
PTN-201ENST00000348225 FAIM2Q9BWQ8 316 aa17.77■□□□□ 0.44
PTN-201ENST00000348225 ROGDIQ9GZN7 287 aa17.77■□□□□ 0.44
PTN-201ENST00000348225 ABCG4Q9H172 646 aa17.77■□□□□ 0.44
PTN-201ENST00000348225 COPS7BQ9H9Q2 264 aaPredicted RBP17.77■□□□□ 0.44
PTN-201ENST00000348225 ACTR3BQ9P1U1 418 aa17.77■□□□□ 0.44
PTN-201ENST00000348225 PCDHGB4Q9UN71 923 aa17.77■□□□□ 0.44
PTN-201ENST00000348225 SNX13Q9Y5W8 968 aa17.77■□□□□ 0.44
PTN-201ENST00000348225 A0A0G2JN53 185 aa17.76■□□□□ 0.43
PTN-201ENST00000348225 EVPLLA8MZ36 301 aa17.76■□□□□ 0.43
PTN-201ENST00000348225 TMPRSS11DO60235 418 aa17.76■□□□□ 0.43
PTN-201ENST00000348225 EPN2O95208 641 aa17.76■□□□□ 0.43
PTN-201ENST00000348225 B3GALT4O96024 378 aa17.76■□□□□ 0.43
PTN-201ENST00000348225 PVRP15151 417 aa17.76■□□□□ 0.43
PTN-201ENST00000348225 PTPN6P29350 595 aa17.76■□□□□ 0.43
PTN-201ENST00000348225 PPM1FP49593 454 aaPredicted RBP17.76■□□□□ 0.43
PTN-201ENST00000348225 ZNF385BQ569K4 471 aa17.76■□□□□ 0.43
PTN-201ENST00000348225 TICAM1Q8IUC6 712 aa17.76■□□□□ 0.43
PTN-201ENST00000348225 CLECL1Q8IZS7 167 aa17.76■□□□□ 0.43
PTN-201ENST00000348225 KLHL25Q9H0H3 589 aa17.76■□□□□ 0.43
PTN-201ENST00000348225 SYNPO2LQ9H987 977 aa17.76■□□□□ 0.43
PTN-201ENST00000348225 PRDM7Q9NQW5 492 aa17.76■□□□□ 0.43
PTN-201ENST00000348225 TMEM74BQ9NUR3 256 aa17.76■□□□□ 0.43
PTN-201ENST00000348225 GMPR2Q9P2T1 348 aaKnown RBP17.76■□□□□ 0.43
PTN-201ENST00000348225 VPS4AQ9UN37 437 aa17.76■□□□□ 0.43
PTN-201ENST00000348225 TMEM131Q92545 1883 aa17.76■□□□□ 0.43
PTN-201ENST00000348225 HRO43593 1189 aa17.76■□□□□ 0.43
PTN-201ENST00000348225 GPR37L1O60883 481 aa17.76■□□□□ 0.43
PTN-201ENST00000348225 FAM58BPP0C7Q3 252 aa17.76■□□□□ 0.43
PTN-201ENST00000348225 ZCCHC18P0CG32 403 aa17.76■□□□□ 0.43
PTN-201ENST00000348225 DRD2P14416 443 aa17.76■□□□□ 0.43
PTN-201ENST00000348225 ANPEPP15144 967 aa17.76■□□□□ 0.43
PTN-201ENST00000348225 ATP5A1P25705 553 aaKnown RBP17.76■□□□□ 0.43
PTN-201ENST00000348225 PPP1CAP62136 330 aa17.76■□□□□ 0.43
PTN-201ENST00000348225 BNC1Q01954 994 aa17.76■□□□□ 0.43
PTN-201ENST00000348225 BNIP3Q12983 259 aa17.76■□□□□ 0.43
PTN-201ENST00000348225 LCN8Q6JVE9 175 aa17.76■□□□□ 0.43
PTN-201ENST00000348225 ZNF793Q6ZN11 406 aa17.76■□□□□ 0.43
PTN-201ENST00000348225 ZNF621Q6ZSS3 439 aa17.76■□□□□ 0.43
PTN-201ENST00000348225 ZNF438Q7Z4V0 828 aa17.76■□□□□ 0.43
PTN-201ENST00000348225 PROSER1Q86XN7 944 aa17.76■□□□□ 0.43
PTN-201ENST00000348225 ACOT4Q8N9L9 421 aa17.76■□□□□ 0.43
PTN-201ENST00000348225 OR4A15Q8NGL6 344 aa17.76■□□□□ 0.43
PTN-201ENST00000348225 OR8K5Q8NH50 307 aa17.76■□□□□ 0.43
PTN-201ENST00000348225 PIGKQ92643 395 aa17.76■□□□□ 0.43
PTN-201ENST00000348225 ZC3H10Q96K80 434 aaKnown RBP17.76■□□□□ 0.43
PTN-201ENST00000348225 SLC6A13Q9NSD5 602 aa17.76■□□□□ 0.43
PTN-201ENST00000348225 ZNF282Q9UDV7 671 aaPredicted RBP17.76■□□□□ 0.43
PTN-201ENST00000348225 EGFL7Q9UHF1 273 aa17.76■□□□□ 0.43
PTN-201ENST00000348225 MAGEL2Q9UJ55 1249 aa17.76■□□□□ 0.43
PTN-201ENST00000348225 PCDHB3Q9Y5E6 796 aa17.76■□□□□ 0.43
PTN-201ENST00000348225 AQP12BA6NM10 295 aa17.75■□□□□ 0.43
PTN-201ENST00000348225 ARPC2O15144 300 aa17.75■□□□□ 0.43
PTN-201ENST00000348225 ZSCAN9O15535 394 aaPredicted RBP17.75■□□□□ 0.43
PTN-201ENST00000348225 GMNNO75496 209 aa17.75■□□□□ 0.43
PTN-201ENST00000348225 SCELO95171 688 aa17.75■□□□□ 0.43
PTN-201ENST00000348225 C8BP07358 591 aa17.75■□□□□ 0.43
PTN-201ENST00000348225 ZNF10P21506 573 aaPredicted RBP17.75■□□□□ 0.43
PTN-201ENST00000348225 PPIBP23284 216 aaKnown RBP17.75■□□□□ 0.43
PTN-201ENST00000348225 HOXD12P35452 270 aa17.75■□□□□ 0.43
PTN-201ENST00000348225 ALDH9A1P49189 494 aa17.75■□□□□ 0.43
PTN-201ENST00000348225 RAB8AP61006 207 aa17.75■□□□□ 0.43
PTN-201ENST00000348225 MRPS22P82650 360 aaKnown RBP17.75■□□□□ 0.43
PTN-201ENST00000348225 SLAMF1Q13291 335 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms