RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 HIPK1Q86Z02 1210 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 NPAS3Q8IXF0 933 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 CLIP4Q8N3C7 705 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 ATG16L2Q8NAA4 619 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 APOBEC4Q8WW27 367 aaKnown RBP5.78□□□□□ -1.48
CLCN3-201ENST00000347613 ASZ1Q8WWH4 475 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 TRUB1Q8WWH5 349 aaKnown RBP5.78□□□□□ -1.48
CLCN3-201ENST00000347613 BORCS5Q969J3 196 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 AP2M1Q96CW1 435 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 CCDC138Q96M89 665 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 HEPHQ9BQS7 1158 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 CENPOQ9BU64 300 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 CXorf36Q9H7Y0 433 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 KRT84Q9NSB2 600 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 ACER3Q9NUN7 267 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 TRNAU1APQ9NX07 287 aaKnown RBP5.78□□□□□ -1.48
CLCN3-201ENST00000347613 GMEB1Q9Y692 573 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 GNG14A0A1W2PPG7 69 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 GMNNO75496 209 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 SERPINB7O75635 380 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 EPN2O95208 641 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 EPPINO95925 133 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 CCDC159P0C7I6 412 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 CYP2A7P20853 494 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 FPR1P21462 350 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 GADD45AP24522 165 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 TPP2P29144 1249 aaPredicted RBP5.78□□□□□ -1.48
CLCN3-201ENST00000347613 LIMS1P48059 325 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 CDH12P55289 794 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 SELENOWP63302 87 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 DUSP2Q05923 314 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 ACSM2AQ08AH3 577 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 TUBA3CQ13748 450 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 STARD3Q14849 445 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 KIAA1614Q5VZ46 1190 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 ACSM2BQ68CK6 577 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 METTL2BQ6P1Q9 378 aaKnown RBP5.78□□□□□ -1.48
CLCN3-201ENST00000347613 C16orf87Q6PH81 154 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 AADATQ8N5Z0 425 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 TRAM1L1Q8N609 369 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 TP53I13Q8NBR0 393 aaPredicted RBP5.78□□□□□ -1.48
CLCN3-201ENST00000347613 GPR32P1Q8NGA4 272 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 C16orf78Q8WTQ4 265 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 GTPBP3Q969Y2 492 aaKnown RBP5.78□□□□□ -1.48
CLCN3-201ENST00000347613 TBC1D20Q96BZ9 403 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 LGALS12Q96DT0 336 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 PAWRQ96IZ0 340 aaKnown RBP5.78□□□□□ -1.48
CLCN3-201ENST00000347613 MAGED4Q96JG8 741 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 COQ10AQ96MF6 247 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 RDH12Q96NR8 316 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 SH3GL1Q99961 368 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 MENTQ9BUN1 341 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 ZDHHC5Q9C0B5 715 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 RMND5AQ9H871 391 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 POLMQ9NP87 494 aaPredicted RBP5.78□□□□□ -1.48
CLCN3-201ENST00000347613 ASAH2Q9NR71 780 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 TMEM9Q9P0T7 183 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 IL36AQ9UHA7 158 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 SLC25A13Q9UJS0 675 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 SAMD4AQ9UPU9 718 aaKnown RBP5.78□□□□□ -1.48
CLCN3-201ENST00000347613 SH3GLB1Q9Y371 365 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 PLEKHM1Q9Y4G2 1056 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 TRPM6Q9BX84 2022 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 PIPSLA2A3N6 862 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 LCMT2O60294 686 aaKnown RBP5.78□□□□□ -1.48
CLCN3-201ENST00000347613 FKTNO75072 461 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 RECQL5O94762 991 aaPredicted RBP5.78□□□□□ -1.48
CLCN3-201ENST00000347613 NADKO95544 446 aaPredicted RBP5.78□□□□□ -1.48
CLCN3-201ENST00000347613 CYP17A1P05093 508 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 IL3P08700 152 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 OCM2P0CE71 109 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 OCMP0CE72 109 aaPredicted RBP5.78□□□□□ -1.48
CLCN3-201ENST00000347613 TGM1P22735 817 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 ACADLP28330 430 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 BCAP31P51572 246 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 EPS8Q12929 822 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 PPIGQ13427 754 aaKnown RBP eCLIP5.78□□□□□ -1.48
CLCN3-201ENST00000347613 KEAP1Q14145 624 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 IRF3Q14653 427 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 OXA1LQ15070 435 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 TCEA2Q15560 299 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 PAQR6Q6TCH4 344 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 KRT77Q7Z794 578 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 TMCO5AQ8N6Q1 288 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 KIAA1958Q8N8K9 716 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 SPPL2AQ8TCT8 520 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 RAB8BQ92930 207 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 GLMNQ92990 594 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 COX4I2Q96KJ9 171 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 HRASLS5Q96KN8 279 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 FAM129BQ96TA1 746 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 PITX2Q99697 317 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 GPA33Q99795 319 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 C19orf43Q9BQ61 176 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 SLC35A5Q9BS91 424 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 CCM2Q9BSQ5 444 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 GIN1Q9NXP7 522 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 OSGIN1Q9UJX0 560 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 WDR37Q9Y2I8 494 aa5.78□□□□□ -1.48
CLCN3-201ENST00000347613 TMED5Q9Y3A6 229 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms