RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 CNTN1Q12860 1018 aa14.77□□□□□ -0.04
UPF3B-202ENST00000345865 SCARB2Q14108 478 aa14.77□□□□□ -0.04
UPF3B-202ENST00000345865 GPR153Q6NV75 609 aa14.77□□□□□ -0.04
UPF3B-202ENST00000345865 ENTHD1Q8IYW4 607 aa14.77□□□□□ -0.04
UPF3B-202ENST00000345865 OR52J3Q8NH60 311 aa14.77□□□□□ -0.04
UPF3B-202ENST00000345865 COX14Q96I36 57 aa14.77□□□□□ -0.04
UPF3B-202ENST00000345865 KCNC2Q96PR1 638 aa14.77□□□□□ -0.04
UPF3B-202ENST00000345865 FEVQ99581 238 aa14.77□□□□□ -0.04
UPF3B-202ENST00000345865 APOL4Q9BPW4 351 aa14.77□□□□□ -0.04
UPF3B-202ENST00000345865 TAS2R9Q9NYW1 312 aa14.77□□□□□ -0.04
UPF3B-202ENST00000345865 TDRKHQ9Y2W6 561 aaKnown RBP14.77□□□□□ -0.04
UPF3B-202ENST00000345865 PCDHGA6Q9Y5G7 932 aa14.77□□□□□ -0.04
UPF3B-202ENST00000345865 COL4A3Q01955 1670 aa14.77□□□□□ -0.05
UPF3B-202ENST00000345865 J3KTA2 159 aa14.77□□□□□ -0.05
UPF3B-202ENST00000345865 RTCAO00442 366 aaKnown RBP14.77□□□□□ -0.05
UPF3B-202ENST00000345865 PI15O43692 258 aa14.77□□□□□ -0.05
UPF3B-202ENST00000345865 VEGFDO43915 354 aa14.77□□□□□ -0.05
UPF3B-202ENST00000345865 NFATC1O95644 943 aa14.77□□□□□ -0.05
UPF3B-202ENST00000345865 GSSP48637 474 aa14.77□□□□□ -0.05
UPF3B-202ENST00000345865 LRRC74AQ0VAA2 488 aa14.77□□□□□ -0.05
UPF3B-202ENST00000345865 TMED1Q13445 227 aa14.77□□□□□ -0.05
UPF3B-202ENST00000345865 MOGQ16653 247 aa14.77□□□□□ -0.05
UPF3B-202ENST00000345865 GCNT6Q5T4J0 391 aa14.77□□□□□ -0.05
UPF3B-202ENST00000345865 C10orf62Q5T681 223 aaPredicted RBP14.77□□□□□ -0.05
UPF3B-202ENST00000345865 PDZD3Q86UT5 571 aa14.77□□□□□ -0.05
UPF3B-202ENST00000345865 HEATR4Q86WZ0 1026 aa14.77□□□□□ -0.05
UPF3B-202ENST00000345865 CACUL1Q86Y37 369 aa14.77□□□□□ -0.05
UPF3B-202ENST00000345865 ADGRF3Q8IZF5 1079 aa14.77□□□□□ -0.05
UPF3B-202ENST00000345865 ZNF784Q8NCA9 323 aaPredicted RBP14.77□□□□□ -0.05
UPF3B-202ENST00000345865 ZNF540Q8NDQ6 660 aa14.77□□□□□ -0.05
UPF3B-202ENST00000345865 SETD7Q8WTS6 366 aaKnown RBP14.77□□□□□ -0.05
UPF3B-202ENST00000345865 ZNF717Q9BY31 904 aaPredicted RBP14.77□□□□□ -0.05
UPF3B-202ENST00000345865 RAD21L1Q9H4I0 556 aa14.77□□□□□ -0.05
UPF3B-202ENST00000345865 ALPK3Q96L96 1907 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 KIF26AQ9ULI4 1882 aaPredicted RBP14.76□□□□□ -0.05
UPF3B-202ENST00000345865 J3QRK9 145 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 PLPP1O14494 284 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 CLPXO76031 633 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 VIPP01282 170 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 FCHO2Q0JRZ9 810 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 UNC5DQ6UXZ4 953 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 SLC9B2Q86UD5 537 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 PARP8Q8N3A8 854 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 SLC5A8Q8N695 610 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 SLC15A4Q8N697 577 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 ANKRD53Q8N9V6 530 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 OR4C15Q8NGM1 316 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 TFGQ92734 400 aaPredicted RBP14.76□□□□□ -0.05
UPF3B-202ENST00000345865 RAD51AP1Q96B01 352 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 PPP1R16AQ96I34 528 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 HRASLS5Q96KN8 279 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 GABARAPL3Q9BY60 117 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 ABCG4Q9H172 646 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 SLAMF7Q9NQ25 335 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 PRSS16Q9NQE7 514 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 DYRK4Q9NR20 520 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 CUEDC1Q9NWM3 386 aaPredicted RBP14.76□□□□□ -0.05
UPF3B-202ENST00000345865 TPRKBQ9Y3C4 175 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 NINQ8N4C6 2090 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 A0A1W2PRB8 838 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 TNFRSF11BO00300 401 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 DNAJB5O75953 348 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 FADS2O95864 444 aaKnown RBP14.76□□□□□ -0.05
UPF3B-202ENST00000345865 PSMB5P28074 263 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 CYP4F2P78329 520 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 LCTLQ6UWM7 567 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 CCDC81Q6ZN84 652 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 AMZ2Q86W34 360 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 DRAXINQ8NBI3 349 aaPredicted RBP14.76□□□□□ -0.05
UPF3B-202ENST00000345865 CXorf40AQ8TE69 158 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 RORBQ92753 470 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 DNASE1L2Q92874 299 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 FGF13Q92913 245 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 BORCS5Q969J3 196 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 PLEKHA8Q96JA3 519 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 SIGLEC11Q96RL6 698 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 MENTQ9BUN1 341 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 TMEM38AQ9H6F2 299 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 TAC3Q9UHF0 121 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 AP1M2Q9Y6Q5 423 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 HEATR5BQ9P2D3 2071 aa14.76□□□□□ -0.05
UPF3B-202ENST00000345865 PRAMEF33A0A0G2JMD5 474 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 PRAMEF10O60809 474 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 FAM20BO75063 409 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 RECKO95980 971 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 PCCBP05166 539 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 PTX3P26022 381 aaPredicted RBP14.75□□□□□ -0.05
UPF3B-202ENST00000345865 CHI3L1P36222 383 aaPredicted RBP14.75□□□□□ -0.05
UPF3B-202ENST00000345865 PRIM2P49643 509 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 CCR3P51677 355 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 CDK6Q00534 326 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 EIF4HQ15056 248 aaKnown RBP14.75□□□□□ -0.05
UPF3B-202ENST00000345865 PROX2Q3B8N5 592 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 PIP5KL1Q5T9C9 394 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 PNCKQ6P2M8 343 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 CCDC80Q76M96 950 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 SMYD1Q8NB12 490 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 ABHD11Q8NFV4 315 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 YIPF6Q96EC8 236 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 ZNF300Q96RE9 604 aaPredicted RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms