RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 PPT2Q9UMR5 302 aa18.66■□□□□ 0.58
CLTA-202ENST00000345519 B3GNT3Q9Y2A9 372 aa18.66■□□□□ 0.58
CLTA-202ENST00000345519 CLDN16Q9Y5I7 305 aa18.66■□□□□ 0.58
CLTA-202ENST00000345519 USP9XQ93008 2570 aaPredicted RBP18.65■□□□□ 0.58
CLTA-202ENST00000345519 H0YIV9 168 aa18.65■□□□□ 0.58
CLTA-202ENST00000345519 ERI3O43414 337 aaKnown RBP18.65■□□□□ 0.58
CLTA-202ENST00000345519 GFAPP14136 432 aa18.65■□□□□ 0.58
CLTA-202ENST00000345519 TSFMP43897 325 aaKnown RBP18.65■□□□□ 0.58
CLTA-202ENST00000345519 ARFIP1P53367 373 aa18.65■□□□□ 0.58
CLTA-202ENST00000345519 OLR1P78380 273 aa18.65■□□□□ 0.58
CLTA-202ENST00000345519 MFAP5Q13361 173 aa18.65■□□□□ 0.58
CLTA-202ENST00000345519 RASA2Q15283 850 aa18.65■□□□□ 0.58
CLTA-202ENST00000345519 LGSNQ5TDP6 509 aa18.65■□□□□ 0.58
CLTA-202ENST00000345519 FAAH2Q6GMR7 532 aa18.65■□□□□ 0.58
CLTA-202ENST00000345519 H3F3CQ6NXT2 135 aa18.65■□□□□ 0.58
CLTA-202ENST00000345519 MED27Q6P2C8 311 aa18.65■□□□□ 0.58
CLTA-202ENST00000345519 SCUBE1Q8IWY4 988 aa18.65■□□□□ 0.58
CLTA-202ENST00000345519 PARP9Q8IXQ6 854 aa18.65■□□□□ 0.58
CLTA-202ENST00000345519 GSPT2Q8IYD1 628 aaKnown RBP18.65■□□□□ 0.58
CLTA-202ENST00000345519 OR7G3Q8NG95 312 aa18.65■□□□□ 0.58
CLTA-202ENST00000345519 ADAMTS18Q8TE60 1221 aa18.65■□□□□ 0.58
CLTA-202ENST00000345519 BARD1Q99728 777 aaKnown RBP18.65■□□□□ 0.58
CLTA-202ENST00000345519 MRPL57Q9BQC6 102 aaKnown RBP18.65■□□□□ 0.58
CLTA-202ENST00000345519 TRIM4Q9C037 500 aa18.65■□□□□ 0.58
CLTA-202ENST00000345519 MRPL46Q9H2W6 279 aaKnown RBP18.65■□□□□ 0.58
CLTA-202ENST00000345519 PRDM7Q9NQW5 492 aa18.65■□□□□ 0.58
CLTA-202ENST00000345519 PSMC3IPQ9P2W1 217 aaPredicted RBP18.65■□□□□ 0.58
CLTA-202ENST00000345519 ADGRE2Q9UHX3 823 aa18.65■□□□□ 0.58
CLTA-202ENST00000345519 RP1L1Q8IWN7 2480 aaPredicted RBP18.64■□□□□ 0.58
CLTA-202ENST00000345519 A0A088AWK7 358 aa18.64■□□□□ 0.57
CLTA-202ENST00000345519 TCRBV16S1A1N1A0A5B0 115 aa18.64■□□□□ 0.57
CLTA-202ENST00000345519 OR2W5A6NFC9 320 aa18.64■□□□□ 0.57
CLTA-202ENST00000345519 SIX3O95343 332 aaPredicted RBP18.64■□□□□ 0.57
CLTA-202ENST00000345519 RPS17P08708 135 aaKnown RBP18.64■□□□□ 0.57
CLTA-202ENST00000345519 ZNF10P21506 573 aaPredicted RBP18.64■□□□□ 0.57
CLTA-202ENST00000345519 PIK3CBP42338 1070 aa18.64■□□□□ 0.57
CLTA-202ENST00000345519 GTF2H2Q13888 395 aa18.64■□□□□ 0.57
CLTA-202ENST00000345519 ABRAXAS2Q15018 415 aa18.64■□□□□ 0.57
CLTA-202ENST00000345519 HIST2H2ACQ16777 129 aaPredicted RBP18.64■□□□□ 0.57
CLTA-202ENST00000345519 HIST2H2AA3Q6FI13 130 aa18.64■□□□□ 0.57
CLTA-202ENST00000345519 GTF2H2CQ6P1K8 395 aa18.64■□□□□ 0.57
CLTA-202ENST00000345519 TRIM40Q6P9F5 258 aa18.64■□□□□ 0.57
CLTA-202ENST00000345519 ISLR2Q6UXK2 745 aa18.64■□□□□ 0.57
CLTA-202ENST00000345519 GOLGA7Q7Z5G4 137 aa18.64■□□□□ 0.57
CLTA-202ENST00000345519 UBE3DQ7Z6J8 389 aa18.64■□□□□ 0.57
CLTA-202ENST00000345519 TEX9Q8N6V9 391 aa18.64■□□□□ 0.57
CLTA-202ENST00000345519 ACMSDQ8TDX5 336 aa18.64■□□□□ 0.57
CLTA-202ENST00000345519 TSLPQ969D9 159 aa18.64■□□□□ 0.57
CLTA-202ENST00000345519 KCNC2Q96PR1 638 aa18.64■□□□□ 0.57
CLTA-202ENST00000345519 SERINC2Q96SA4 455 aa18.64■□□□□ 0.57
CLTA-202ENST00000345519 RBCK1Q9BYM8 510 aa18.64■□□□□ 0.57
CLTA-202ENST00000345519 RNF32Q9H0A6 362 aa18.64■□□□□ 0.57
CLTA-202ENST00000345519 PPCSQ9HAB8 311 aa18.64■□□□□ 0.57
CLTA-202ENST00000345519 PSD3Q9NYI0 1048 aa18.64■□□□□ 0.57
CLTA-202ENST00000345519 PCTPQ9UKL6 214 aa18.64■□□□□ 0.57
CLTA-202ENST00000345519 MMACHCQ9Y4U1 282 aa18.64■□□□□ 0.57
CLTA-202ENST00000345519 LRRK2Q5S007 2527 aa18.64■□□□□ 0.57
CLTA-202ENST00000345519 HIVEP3Q5T1R4 2406 aa18.63■□□□□ 0.57
CLTA-202ENST00000345519 LRRC14BA6NHZ5 514 aa18.63■□□□□ 0.57
CLTA-202ENST00000345519 CDC123O75794 336 aaPredicted RBP18.63■□□□□ 0.57
CLTA-202ENST00000345519 CELA2AP08217 269 aa18.63■□□□□ 0.57
CLTA-202ENST00000345519 RUNX2Q13950 521 aa18.63■□□□□ 0.57
CLTA-202ENST00000345519 GGTA1PQ4G0N0 100 aa18.63■□□□□ 0.57
CLTA-202ENST00000345519 TMEM35AQ53FP2 167 aa18.63■□□□□ 0.57
CLTA-202ENST00000345519 TEX35Q5T0J7 233 aa18.63■□□□□ 0.57
CLTA-202ENST00000345519 IRAK1BP1Q5VVH5 260 aa18.63■□□□□ 0.57
CLTA-202ENST00000345519 TDRPQ86YL5 185 aa18.63■□□□□ 0.57
CLTA-202ENST00000345519 ZADH2Q8N4Q0 377 aa18.63■□□□□ 0.57
CLTA-202ENST00000345519 PTGR2Q8N8N7 351 aaPredicted RBP18.63■□□□□ 0.57
CLTA-202ENST00000345519 SRFBP1Q8NEF9 429 aaKnown RBP18.63■□□□□ 0.57
CLTA-202ENST00000345519 WDR20Q8TBZ3 569 aa18.63■□□□□ 0.57
CLTA-202ENST00000345519 M1APQ8TC57 530 aa18.63■□□□□ 0.57
CLTA-202ENST00000345519 BRIX1Q8TDN6 353 aaKnown RBP18.63■□□□□ 0.57
CLTA-202ENST00000345519 NTMT1Q9BV86 223 aa18.63■□□□□ 0.57
CLTA-202ENST00000345519 ZBTB26Q9HCK0 441 aa18.63■□□□□ 0.57
CLTA-202ENST00000345519 MMP25Q9NPA2 562 aa18.63■□□□□ 0.57
CLTA-202ENST00000345519 PRDM9Q9NQV7 894 aa18.63■□□□□ 0.57
CLTA-202ENST00000345519 CPSF2Q9P2I0 782 aaKnown RBP18.63■□□□□ 0.57
CLTA-202ENST00000345519 DAPP1Q9UN19 280 aa18.63■□□□□ 0.57
CLTA-202ENST00000345519 PCDHGA11Q9Y5H2 935 aa18.63■□□□□ 0.57
CLTA-202ENST00000345519 PCDHGA10Q9Y5H3 936 aa18.63■□□□□ 0.57
CLTA-202ENST00000345519 CSAG2Q9Y5P2 127 aa18.63■□□□□ 0.57
CLTA-202ENST00000345519 PTPN13Q12923 2485 aa18.62■□□□□ 0.57
CLTA-202ENST00000345519 IQANK1A0A1B0GTG1 560 aa18.62■□□□□ 0.57
CLTA-202ENST00000345519 SYNDIG1LA6NDD5 238 aa18.62■□□□□ 0.57
CLTA-202ENST00000345519 CYR61O00622 381 aa18.62■□□□□ 0.57
CLTA-202ENST00000345519 OR7A17O14581 309 aa18.62■□□□□ 0.57
CLTA-202ENST00000345519 SEC24DO94855 1032 aaPredicted RBP18.62■□□□□ 0.57
CLTA-202ENST00000345519 ITGAMP11215 1152 aa18.62■□□□□ 0.57
CLTA-202ENST00000345519 MTTPP55157 894 aa18.62■□□□□ 0.57
CLTA-202ENST00000345519 RAB38P57729 211 aa18.62■□□□□ 0.57
CLTA-202ENST00000345519 BTN3A2P78410 334 aa18.62■□□□□ 0.57
CLTA-202ENST00000345519 TERF2Q15554 542 aa18.62■□□□□ 0.57
CLTA-202ENST00000345519 NSDHLQ15738 373 aa18.62■□□□□ 0.57
CLTA-202ENST00000345519 EXT1Q16394 746 aa18.62■□□□□ 0.57
CLTA-202ENST00000345519 PLEKHN1Q494U1 663 aaPredicted RBP18.62■□□□□ 0.57
CLTA-202ENST00000345519 COLEC12Q5KU26 742 aa18.62■□□□□ 0.57
CLTA-202ENST00000345519 B3GNTL1Q67FW5 361 aaPredicted RBP18.62■□□□□ 0.57
CLTA-202ENST00000345519 ZNF793Q6ZN11 406 aa18.62■□□□□ 0.57
CLTA-202ENST00000345519 SH2D5Q6ZV89 423 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms