RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 ZFAND4Q86XD8 727 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 HS3ST5Q8IZT8 346 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 BEST3Q8N1M1 668 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 RERGQ96A58 199 aaPredicted RBP11.7□□□□□ -0.54
COL12A1-202ENST00000345356 MAGEH1Q9H213 219 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 OLAHQ9NV23 265 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 DNAJC15Q9Y5T4 150 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 TSPAN1O60635 241 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 VTCN1Q7Z7D3 282 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 KDM1BQ8NB78 822 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 MFSD8Q8NHS3 518 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 ZNF382Q96SR6 550 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 FEVQ99581 238 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 GNG8Q9UK08 70 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 BCL9O00512 1426 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 TFP02787 698 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 OR4Q2P0C623 313 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 EBLN1P0CF75 366 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 PTPN6P29350 595 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 AGTR1P30556 359 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 CDK10Q15131 360 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 TATDN3Q17R31 274 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 CNIH2Q6PI25 160 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 LRRC70Q7Z2Q7 622 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 CEACAM19Q7Z692 300 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 C14orf80Q86SX3 495 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 LILRA2Q8N149 483 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 DHRS4Q9BTZ2 278 aa11.7□□□□□ -0.54
COL12A1-202ENST00000345356 ZNF334Q9HCZ1 680 aaPredicted RBP11.7□□□□□ -0.54
COL12A1-202ENST00000345356 MYBPHLA2RUH7 354 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 MRPS14O60783 128 aaKnown RBP11.69□□□□□ -0.54
COL12A1-202ENST00000345356 TGFB1P01137 390 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 HTR1BP28222 390 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 SCNN1AP37088 669 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 FKBP1AP62942 108 aaKnown RBP11.69□□□□□ -0.54
COL12A1-202ENST00000345356 ALG11Q2TAA5 492 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 SPIN4Q56A73 249 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 STEAP3Q658P3 488 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 OR8J1Q8NGP2 316 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 RAET1EQ8TD07 263 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 CIDECQ96AQ7 238 aaPredicted RBP11.69□□□□□ -0.54
COL12A1-202ENST00000345356 GPR20Q99678 358 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 MRM3Q9HC36 420 aaKnown RBP11.69□□□□□ -0.54
COL12A1-202ENST00000345356 SLC22A14Q9Y267 594 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 ALDOBP05062 364 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 GTF2F2P13984 249 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 NT5EP21589 574 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 STC1P52823 247 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 GALNT2Q10471 571 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 ZNF155Q12901 538 aaPredicted RBP11.69□□□□□ -0.54
COL12A1-202ENST00000345356 GRIK2Q13002 908 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 EIPR1Q53HC9 387 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 CERKQ8TCT0 537 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 CMTM7Q96FZ5 175 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 ZNF649Q9BS31 505 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 OR1F1O43749 312 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 GMDSO60547 372 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 CD1DP15813 335 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 ALDH3B2P48448 385 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 NCBP2P52298 156 aaKnown RBP eCLIP11.69□□□□□ -0.54
COL12A1-202ENST00000345356 MC2RQ01718 297 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 ESCO2Q56NI9 601 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 RNF130Q86XS8 419 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 OR7G2Q8NG99 324 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 OR13F1Q8NGS4 319 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 PPP1R16AQ96I34 528 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 ZNF599Q96NL3 588 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 PIP5K1AQ99755 562 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 TTPALQ9BTX7 342 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 MRIQ9BWK5 157 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 FZD1Q9UP38 647 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 ZFP37Q9Y6Q3 630 aaPredicted RBP11.69□□□□□ -0.54
COL12A1-202ENST00000345356 SOBPA7XYQ1 873 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 RBBP9O75884 186 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 KCNC4Q03721 635 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 FPGSQ05932 587 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 CXCL9Q07325 125 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 DBPQ10586 325 aaPredicted RBP11.69□□□□□ -0.54
COL12A1-202ENST00000345356 ARFRP1Q13795 201 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 TMEM69Q5SWH9 247 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 DTWD1Q8N5C7 304 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 CELF2-AS1Q8N7Q2 184 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 ATAD1Q8NBU5 361 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 TTTY10Q9BZA0 68 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 POT1Q9NUX5 634 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 IMP3Q9NV31 184 aaKnown RBP11.69□□□□□ -0.54
COL12A1-202ENST00000345356 ASF1BQ9NVP2 202 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 GLTPQ9NZD2 209 aa11.69□□□□□ -0.54
COL12A1-202ENST00000345356 IGKV6D-41A0A0C4DH26 115 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 KLRG2A4D1S0 409 aaPredicted RBP11.68□□□□□ -0.54
COL12A1-202ENST00000345356 B3GALNT1O75752 331 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 RETP07949 1114 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 TUBG1P23258 451 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 RXRBP28702 533 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 ABCA11PQ4W5N1 156 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 AADACL4Q5VUY2 407 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 C3P1Q6ZMU1 363 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 CFAP77Q6ZQR2 320 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 FAM83FQ8NEG4 500 aaPredicted RBP11.68□□□□□ -0.54
COL12A1-202ENST00000345356 SCGB3A2Q96PL1 93 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms