RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 ADAMTS20P59510 1910 aa11.23□□□□□ -0.61
SNCA-202ENST00000345009 WDR91A4D1P6 747 aa11.22□□□□□ -0.61
SNCA-202ENST00000345009 MAGEB17A8MXT2 336 aa11.22□□□□□ -0.61
SNCA-202ENST00000345009 PSMD12O00232 456 aaPredicted RBP11.22□□□□□ -0.61
SNCA-202ENST00000345009 PPP6CO00743 305 aa11.22□□□□□ -0.61
SNCA-202ENST00000345009 FOXS1O43638 330 aa11.22□□□□□ -0.61
SNCA-202ENST00000345009 B3GALT2O43825 422 aa11.22□□□□□ -0.61
SNCA-202ENST00000345009 GALR3O60755 368 aaPredicted RBP11.22□□□□□ -0.61
SNCA-202ENST00000345009 CREG1O75629 220 aa11.22□□□□□ -0.61
SNCA-202ENST00000345009 OR4F21O95013 312 aa11.22□□□□□ -0.61
SNCA-202ENST00000345009 TGFB1P01137 390 aa11.22□□□□□ -0.61
SNCA-202ENST00000345009 IGHEP01854 428 aa11.22□□□□□ -0.61
SNCA-202ENST00000345009 SERPINE1P05121 402 aa11.22□□□□□ -0.61
SNCA-202ENST00000345009 CAPN1P07384 714 aa11.22□□□□□ -0.61
SNCA-202ENST00000345009 UROSP10746 265 aa11.22□□□□□ -0.61
SNCA-202ENST00000345009 IL1RNP18510 177 aa11.22□□□□□ -0.61
SNCA-202ENST00000345009 FOLR3P41439 243 aa11.22□□□□□ -0.61
SNCA-202ENST00000345009 TSFMP43897 325 aaKnown RBP11.22□□□□□ -0.61
SNCA-202ENST00000345009 PLA2G16P53816 162 aa11.22□□□□□ -0.61
SNCA-202ENST00000345009 RAB8AP61006 207 aa11.22□□□□□ -0.61
SNCA-202ENST00000345009 BTN3A2P78410 334 aa11.22□□□□□ -0.61
SNCA-202ENST00000345009 SLC9A5Q14940 896 aa11.22□□□□□ -0.61
SNCA-202ENST00000345009 ST3GAL2Q16842 350 aa11.22□□□□□ -0.61
SNCA-202ENST00000345009 ADPRMQ3LIE5 342 aa11.22□□□□□ -0.61
SNCA-202ENST00000345009 CRTC2Q53ET0 693 aaPredicted RBP11.22□□□□□ -0.61
SNCA-202ENST00000345009 SGO1Q5FBB7 561 aa11.22□□□□□ -0.61
SNCA-202ENST00000345009 RPS27LQ71UM5 84 aaKnown RBP11.22□□□□□ -0.61
SNCA-202ENST00000345009 PAGE2Q7Z2X7 111 aa11.22□□□□□ -0.61
SNCA-202ENST00000345009 VASH2Q86V25 355 aa11.22□□□□□ -0.61
SNCA-202ENST00000345009 ARHGEF39Q8N4T4 335 aa11.22□□□□□ -0.61
SNCA-202ENST00000345009 METTL27Q8N6F8 245 aaPredicted RBP11.22□□□□□ -0.61
SNCA-202ENST00000345009 ENDOVQ8N8Q3 282 aaKnown RBP11.22□□□□□ -0.61
SNCA-202ENST00000345009 GBP7Q8N8V2 638 aaPredicted RBP11.22□□□□□ -0.61
SNCA-202ENST00000345009 WDR20Q8TBZ3 569 aa11.22□□□□□ -0.61
SNCA-202ENST00000345009 AGAP11Q8TF27 550 aa11.22□□□□□ -0.61
SNCA-202ENST00000345009 NACC2Q96BF6 587 aa11.22□□□□□ -0.61
SNCA-202ENST00000345009 ARL8AQ96BM9 186 aa11.22□□□□□ -0.61
SNCA-202ENST00000345009 MIEF2Q96C03 454 aa11.22□□□□□ -0.61
SNCA-202ENST00000345009 MTFMTQ96DP5 389 aaKnown RBP11.22□□□□□ -0.61
SNCA-202ENST00000345009 QRFPRQ96P65 431 aa11.22□□□□□ -0.61
SNCA-202ENST00000345009 F2RL3Q96RI0 385 aa11.22□□□□□ -0.61
SNCA-202ENST00000345009 MECRQ9BV79 373 aa11.22□□□□□ -0.61
SNCA-202ENST00000345009 NPLQ9BXD5 320 aaPredicted RBP11.22□□□□□ -0.61
SNCA-202ENST00000345009 MS4A8Q9BY19 250 aa11.22□□□□□ -0.61
SNCA-202ENST00000345009 ACTL8Q9H568 366 aa11.22□□□□□ -0.61
SNCA-202ENST00000345009 SYNPO2LQ9H987 977 aa11.22□□□□□ -0.61
SNCA-202ENST00000345009 C14orf105Q9NVL8 296 aa11.22□□□□□ -0.61
SNCA-202ENST00000345009 TCFL5Q9UL49 500 aa11.22□□□□□ -0.61
SNCA-202ENST00000345009 SPACA6W5XKT8 324 aa11.22□□□□□ -0.61
SNCA-202ENST00000345009 SRRM3A6NNA2 597 aaPredicted RBP11.21□□□□□ -0.61
SNCA-202ENST00000345009 TMEM114B3SHH9 223 aa11.21□□□□□ -0.61
SNCA-202ENST00000345009 SGK494L7N484 410 aa11.21□□□□□ -0.61
SNCA-202ENST00000345009 MANBAO00462 879 aa11.21□□□□□ -0.61
SNCA-202ENST00000345009 PCDH17O14917 1159 aa11.21□□□□□ -0.61
SNCA-202ENST00000345009 DHRS4L1P0CG22 281 aa11.21□□□□□ -0.61
SNCA-202ENST00000345009 SMIM10L1P0DMW3 83 aa11.21□□□□□ -0.61
SNCA-202ENST00000345009 JAK1P23458 1154 aa11.21□□□□□ -0.61
SNCA-202ENST00000345009 HNRNPH1P31943 449 aaKnown RBP11.21□□□□□ -0.61
SNCA-202ENST00000345009 NEK2P51955 445 aa11.21□□□□□ -0.61
SNCA-202ENST00000345009 MTTPP55157 894 aa11.21□□□□□ -0.61
SNCA-202ENST00000345009 RPS13P62277 151 aaKnown RBP11.21□□□□□ -0.61
SNCA-202ENST00000345009 VAC14Q08AM6 782 aa11.21□□□□□ -0.61
SNCA-202ENST00000345009 HYAL2Q12891 473 aa11.21□□□□□ -0.61
SNCA-202ENST00000345009 CSTF3Q12996 717 aaKnown RBP11.21□□□□□ -0.61
SNCA-202ENST00000345009 MPP2Q14168 576 aa11.21□□□□□ -0.61
SNCA-202ENST00000345009 SSPNQ14714 243 aa11.21□□□□□ -0.61
SNCA-202ENST00000345009 CHI3L2Q15782 390 aa11.21□□□□□ -0.61
SNCA-202ENST00000345009 ARL13AQ5H913 290 aaPredicted RBP11.21□□□□□ -0.61
SNCA-202ENST00000345009 ATG16L1Q676U5 607 aa11.21□□□□□ -0.61
SNCA-202ENST00000345009 MRPL14Q6P1L8 145 aaKnown RBP11.21□□□□□ -0.61
SNCA-202ENST00000345009 ABHD17CQ6PCB6 329 aa11.21□□□□□ -0.61
SNCA-202ENST00000345009 FAM198BQ6UWH4 519 aa11.21□□□□□ -0.61
SNCA-202ENST00000345009 VN1R5Q7Z5H4 357 aa11.21□□□□□ -0.61
SNCA-202ENST00000345009 RAB43Q86YS6 212 aa11.21□□□□□ -0.61
SNCA-202ENST00000345009 CLYBLQ8N0X4 340 aa11.21□□□□□ -0.61
SNCA-202ENST00000345009 C7orf57Q8NEG2 295 aa11.21□□□□□ -0.61
SNCA-202ENST00000345009 OR2Y1Q8NGV0 311 aa11.21□□□□□ -0.61
SNCA-202ENST00000345009 OR51Q1Q8NH59 317 aa11.21□□□□□ -0.61
SNCA-202ENST00000345009 MGARPQ8TDB4 240 aa11.21□□□□□ -0.61
SNCA-202ENST00000345009 ADAMTS18Q8TE60 1221 aa11.21□□□□□ -0.61
SNCA-202ENST00000345009 STARD8Q92502 1023 aa11.21□□□□□ -0.61
SNCA-202ENST00000345009 SMIM10Q96HG1 83 aa11.21□□□□□ -0.61
SNCA-202ENST00000345009 IP6K3Q96PC2 410 aa11.21□□□□□ -0.61
SNCA-202ENST00000345009 OR1F2PQ96R84 312 aa11.21□□□□□ -0.61
SNCA-202ENST00000345009 SERINC2Q96SA4 455 aa11.21□□□□□ -0.61
SNCA-202ENST00000345009 TGIF2Q9GZN2 237 aa11.21□□□□□ -0.61
SNCA-202ENST00000345009 OR51B5Q9H339 312 aa11.21□□□□□ -0.61
SNCA-202ENST00000345009 KLHL31Q9H511 634 aa11.21□□□□□ -0.61
SNCA-202ENST00000345009 AKIRIN1Q9H9L7 192 aaPredicted RBP11.21□□□□□ -0.61
SNCA-202ENST00000345009 ACSS2Q9NR19 701 aa11.21□□□□□ -0.61
SNCA-202ENST00000345009 VPS29Q9UBQ0 182 aa11.21□□□□□ -0.61
SNCA-202ENST00000345009 MRPS33Q9Y291 106 aaKnown RBP11.21□□□□□ -0.61
SNCA-202ENST00000345009 PTRH2Q9Y3E5 179 aaKnown RBP11.21□□□□□ -0.61
SNCA-202ENST00000345009 PTPRQQ9UMZ3 2332 aa11.21□□□□□ -0.62
SNCA-202ENST00000345009 ZZEF1O43149 2961 aa11.21□□□□□ -0.62
SNCA-202ENST00000345009 ARHGAP10A1A4S6 786 aa11.2□□□□□ -0.62
SNCA-202ENST00000345009 TERTO14746 1132 aaKnown RBP11.2□□□□□ -0.62
SNCA-202ENST00000345009 AZIN1O14977 448 aa11.2□□□□□ -0.62
SNCA-202ENST00000345009 EFSO43281 561 aa11.2□□□□□ -0.62
SNCA-202ENST00000345009 GUCY1B2O75343 617 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms