RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 PRRT2Q7Z6L0 340 aaPredicted RBP14.27□□□□□ -0.12
CLCN1-201ENST00000343257 THEM5Q8N1Q8 247 aa14.27□□□□□ -0.12
CLCN1-201ENST00000343257 PKP4Q99569 1192 aa14.27□□□□□ -0.12
CLCN1-201ENST00000343257 C17orf62Q9BQA9 187 aa14.27□□□□□ -0.12
CLCN1-201ENST00000343257 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.27□□□□□ -0.12
CLCN1-201ENST00000343257 SNX11Q9Y5W9 270 aa14.27□□□□□ -0.12
CLCN1-201ENST00000343257 ZNF670-ZNF695F2Z2N8 137 aa14.27□□□□□ -0.13
CLCN1-201ENST00000343257 HPGDSO60760 199 aa14.27□□□□□ -0.13
CLCN1-201ENST00000343257 PDE9AO76083 593 aa14.27□□□□□ -0.13
CLCN1-201ENST00000343257 PRAMEF1O95521 474 aa14.27□□□□□ -0.13
CLCN1-201ENST00000343257 PRPS2P11908 318 aa14.27□□□□□ -0.13
CLCN1-201ENST00000343257 EPORP19235 508 aa14.27□□□□□ -0.13
CLCN1-201ENST00000343257 HOXD9P28356 352 aaPredicted RBP14.27□□□□□ -0.13
CLCN1-201ENST00000343257 AP2S1P53680 142 aaPredicted RBP14.27□□□□□ -0.13
CLCN1-201ENST00000343257 BNC1Q01954 994 aa14.27□□□□□ -0.13
CLCN1-201ENST00000343257 HKDC1Q2TB90 917 aa14.27□□□□□ -0.13
CLCN1-201ENST00000343257 ADNP2Q6IQ32 1131 aa14.27□□□□□ -0.13
CLCN1-201ENST00000343257 ANKRD54Q6NXT1 300 aa14.27□□□□□ -0.13
CLCN1-201ENST00000343257 PLEKHM3Q6ZWE6 761 aa14.27□□□□□ -0.13
CLCN1-201ENST00000343257 ZNF767PQ75MW2 155 aa14.27□□□□□ -0.13
CLCN1-201ENST00000343257 C16orf62Q7Z3J2 963 aa14.27□□□□□ -0.13
CLCN1-201ENST00000343257 IQCF1Q8N6M8 205 aa14.27□□□□□ -0.13
CLCN1-201ENST00000343257 DNAJC5GQ8N7S2 189 aa14.27□□□□□ -0.13
CLCN1-201ENST00000343257 OR4K1Q8NGD4 311 aa14.27□□□□□ -0.13
CLCN1-201ENST00000343257 NFKBIDQ8NI38 313 aa14.27□□□□□ -0.13
CLCN1-201ENST00000343257 C9orf43Q8TAL5 461 aaPredicted RBP14.27□□□□□ -0.13
CLCN1-201ENST00000343257 CREB3L4Q8TEY5 395 aa14.27□□□□□ -0.13
CLCN1-201ENST00000343257 MAGEB10Q96LZ2 347 aaPredicted RBP14.27□□□□□ -0.13
CLCN1-201ENST00000343257 SPATA9Q9BWV2 254 aa14.27□□□□□ -0.13
CLCN1-201ENST00000343257 CDCA4Q9BXL8 241 aa14.27□□□□□ -0.13
CLCN1-201ENST00000343257 TXNL4BQ9NX01 149 aaKnown RBP14.27□□□□□ -0.13
CLCN1-201ENST00000343257 TRPS1Q9UHF7 1281 aa14.27□□□□□ -0.13
CLCN1-201ENST00000343257 STUB1Q9UNE7 303 aa14.27□□□□□ -0.13
CLCN1-201ENST00000343257 SPIN1Q9Y657 262 aaPredicted RBP14.27□□□□□ -0.13
CLCN1-201ENST00000343257 GTPBP1O00178 669 aaKnown RBP14.26□□□□□ -0.13
CLCN1-201ENST00000343257 SYPP08247 313 aa14.26□□□□□ -0.13
CLCN1-201ENST00000343257 ZNF865P0CJ78 1059 aaPredicted RBP14.26□□□□□ -0.13
CLCN1-201ENST00000343257 CPN2P22792 545 aa14.26□□□□□ -0.13
CLCN1-201ENST00000343257 RPIAP49247 311 aa14.26□□□□□ -0.13
CLCN1-201ENST00000343257 PRIM2P49643 509 aa14.26□□□□□ -0.13
CLCN1-201ENST00000343257 LRRC74AQ0VAA2 488 aa14.26□□□□□ -0.13
CLCN1-201ENST00000343257 SNTA1Q13424 505 aa14.26□□□□□ -0.13
CLCN1-201ENST00000343257 DUSP28Q4G0W2 176 aa14.26□□□□□ -0.13
CLCN1-201ENST00000343257 ATXN7L2Q5T6C5 722 aaPredicted RBP14.26□□□□□ -0.13
CLCN1-201ENST00000343257 MLIPQ5VWP3 458 aa14.26□□□□□ -0.13
CLCN1-201ENST00000343257 ERICH5Q6P6B1 374 aa14.26□□□□□ -0.13
CLCN1-201ENST00000343257 SYNPOQ8N3V7 929 aa14.26□□□□□ -0.13
CLCN1-201ENST00000343257 C1QTNF6Q9BXI9 259 aa14.26□□□□□ -0.13
CLCN1-201ENST00000343257 P2RY12Q9H244 342 aa14.26□□□□□ -0.13
CLCN1-201ENST00000343257 CCSER2Q9H7U1 834 aa14.26□□□□□ -0.13
CLCN1-201ENST00000343257 PLEKHB1Q9UF11 243 aaPredicted RBP14.26□□□□□ -0.13
CLCN1-201ENST00000343257 SLC22A14Q9Y267 594 aa14.26□□□□□ -0.13
CLCN1-201ENST00000343257 BRCA2P51587 3418 aa14.26□□□□□ -0.13
CLCN1-201ENST00000343257 TRBC1P01850 177 aa14.26□□□□□ -0.13
CLCN1-201ENST00000343257 MSL3P1P0C860 447 aa14.26□□□□□ -0.13
CLCN1-201ENST00000343257 CSTF2P33240 577 aaKnown RBP eCLIP14.26□□□□□ -0.13
CLCN1-201ENST00000343257 PTPN5P54829 565 aa14.26□□□□□ -0.13
CLCN1-201ENST00000343257 MAB21L1Q13394 359 aa14.26□□□□□ -0.13
CLCN1-201ENST00000343257 ZNF792Q3KQV3 632 aa14.26□□□□□ -0.13
CLCN1-201ENST00000343257 DDI2Q5TDH0 399 aa14.26□□□□□ -0.13
CLCN1-201ENST00000343257 TYW3Q6IPR3 259 aaKnown RBP14.26□□□□□ -0.13
CLCN1-201ENST00000343257 CNIH2Q6PI25 160 aa14.26□□□□□ -0.13
CLCN1-201ENST00000343257 MON1AQ86VX9 555 aa14.26□□□□□ -0.13
CLCN1-201ENST00000343257 GALNT11Q8NCW6 608 aa14.26□□□□□ -0.13
CLCN1-201ENST00000343257 FBXO32Q969P5 355 aa14.26□□□□□ -0.13
CLCN1-201ENST00000343257 DACT3Q96B18 629 aaPredicted RBP14.26□□□□□ -0.13
CLCN1-201ENST00000343257 B3GAT2Q9NPZ5 323 aa14.26□□□□□ -0.13
CLCN1-201ENST00000343257 RAB23Q9ULC3 237 aa14.26□□□□□ -0.13
CLCN1-201ENST00000343257 MAP4K5Q9Y4K4 846 aa14.26□□□□□ -0.13
CLCN1-201ENST00000343257 ZFP37Q9Y6Q3 630 aaPredicted RBP14.26□□□□□ -0.13
CLCN1-201ENST00000343257 ATP6V1G2-DDX39BF2Z307 99 aa14.26□□□□□ -0.13
CLCN1-201ENST00000343257 ARSBP15848 533 aa14.26□□□□□ -0.13
CLCN1-201ENST00000343257 AMD1P17707 334 aa14.26□□□□□ -0.13
CLCN1-201ENST00000343257 DDCP20711 480 aa14.26□□□□□ -0.13
CLCN1-201ENST00000343257 TACR2P21452 398 aa14.26□□□□□ -0.13
CLCN1-201ENST00000343257 CRTC2Q53ET0 693 aaPredicted RBP14.26□□□□□ -0.13
CLCN1-201ENST00000343257 ATAT1Q5SQI0 421 aa14.26□□□□□ -0.13
CLCN1-201ENST00000343257 OR2G6Q5TZ20 316 aa14.26□□□□□ -0.13
CLCN1-201ENST00000343257 SLC51BQ86UW2 128 aa14.26□□□□□ -0.13
CLCN1-201ENST00000343257 TCEANCQ8N8B7 351 aa14.26□□□□□ -0.13
CLCN1-201ENST00000343257 DPCDQ9BVM2 203 aaPredicted RBP14.26□□□□□ -0.13
CLCN1-201ENST00000343257 RACGAP1Q9H0H5 632 aa14.26□□□□□ -0.13
CLCN1-201ENST00000343257 SEC14L4Q9UDX3 406 aa14.26□□□□□ -0.13
CLCN1-201ENST00000343257 RALGAPA2Q2PPJ7 1873 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 ZSWIM8A7E2V4 1837 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 SHOXO15266 292 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 GADD45GO95257 159 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 GSTM1P09488 218 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 ZNF7P17097 686 aaPredicted RBP14.25□□□□□ -0.13
CLCN1-201ENST00000343257 M6PRP20645 277 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 DGKAP23743 735 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 HLA-DMAP28067 261 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 GKP32189 559 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 NUDT1P36639 197 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 AVPR1BP47901 424 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 CLCN4P51793 760 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 SMSP52788 366 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 CRYBB1P53674 252 aaPredicted RBP14.25□□□□□ -0.13
CLCN1-201ENST00000343257 SELENOWP63302 87 aa14.25□□□□□ -0.13
CLCN1-201ENST00000343257 HSPA14Q0VDF9 509 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms