RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 TEX13CA0A0J9YWL9 993 aa14.47□□□□□ -0.09
UBE3B-202ENST00000342494 ORC5O43913 435 aa14.47□□□□□ -0.09
UBE3B-202ENST00000342494 RNH1P13489 461 aaKnown RBP14.47□□□□□ -0.09
UBE3B-202ENST00000342494 KCNA7Q96RP8 456 aa14.47□□□□□ -0.09
UBE3B-202ENST00000342494 POLDIP3Q9BY77 421 aaKnown RBP14.47□□□□□ -0.09
UBE3B-202ENST00000342494 NFAT5O94916 1531 aa14.47□□□□□ -0.09
UBE3B-202ENST00000342494 ARL6IP5O75915 188 aa14.47□□□□□ -0.09
UBE3B-202ENST00000342494 ACRV1P26436 265 aa14.47□□□□□ -0.09
UBE3B-202ENST00000342494 AQP4P55087 323 aa14.47□□□□□ -0.09
UBE3B-202ENST00000342494 CDH11P55287 796 aa14.47□□□□□ -0.09
UBE3B-202ENST00000342494 LIPJQ5W064 366 aa14.47□□□□□ -0.09
UBE3B-202ENST00000342494 REEP3Q6NUK4 255 aa14.47□□□□□ -0.09
UBE3B-202ENST00000342494 ZNF565Q8N9K5 539 aa14.47□□□□□ -0.09
UBE3B-202ENST00000342494 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.47□□□□□ -0.095e-6■■■■■ 56.5
UBE3B-202ENST00000342494 OR1F2PQ96R84 312 aa14.47□□□□□ -0.09
UBE3B-202ENST00000342494 ZDHHC18Q9NUE0 388 aa14.47□□□□□ -0.09
UBE3B-202ENST00000342494 LAMP5Q9UJQ1 280 aa14.47□□□□□ -0.09
UBE3B-202ENST00000342494 ZNF221Q9UK13 617 aa14.47□□□□□ -0.09
UBE3B-202ENST00000342494 PLEKHA6Q9Y2H5 1048 aa14.47□□□□□ -0.09
UBE3B-202ENST00000342494 PRKCDQ05655 676 aa14.47□□□□□ -0.09
UBE3B-202ENST00000342494 ZNF234Q14588 700 aa14.47□□□□□ -0.09
UBE3B-202ENST00000342494 LPAL2Q16609 132 aa14.47□□□□□ -0.09
UBE3B-202ENST00000342494 UMODL1-AS1Q8N2C9 162 aa14.47□□□□□ -0.09
UBE3B-202ENST00000342494 CANT1Q8WVQ1 401 aa14.47□□□□□ -0.09
UBE3B-202ENST00000342494 SCGB3A2Q96PL1 93 aa14.47□□□□□ -0.09
UBE3B-202ENST00000342494 TTYH1Q9H313 450 aaPredicted RBP14.47□□□□□ -0.09
UBE3B-202ENST00000342494 H3BSH0 61 aa14.47□□□□□ -0.09
UBE3B-202ENST00000342494 MATN2O00339 956 aa14.47□□□□□ -0.09
UBE3B-202ENST00000342494 C6P13671 934 aa14.47□□□□□ -0.09
UBE3B-202ENST00000342494 GSK3BP49841 420 aa14.47□□□□□ -0.09
UBE3B-202ENST00000342494 ARPC4P59998 168 aa14.47□□□□□ -0.09
UBE3B-202ENST00000342494 CARTPTQ16568 116 aa14.47□□□□□ -0.09
UBE3B-202ENST00000342494 EMC10Q5UCC4 262 aa14.47□□□□□ -0.09
UBE3B-202ENST00000342494 SLITRK4Q8IW52 837 aa14.47□□□□□ -0.09
UBE3B-202ENST00000342494 C10orf82Q8WW14 230 aa14.47□□□□□ -0.09
UBE3B-202ENST00000342494 NINJ1Q92982 152 aa14.47□□□□□ -0.09
UBE3B-202ENST00000342494 TMBIM1Q969X1 311 aa14.47□□□□□ -0.09
UBE3B-202ENST00000342494 PYURFQ96I23 114 aa14.47□□□□□ -0.09
UBE3B-202ENST00000342494 PELOQ9BRX2 385 aaKnown RBP14.47□□□□□ -0.09
UBE3B-202ENST00000342494 TAS2R1Q9NYW7 299 aa14.47□□□□□ -0.09
UBE3B-202ENST00000342494 CD207Q9UJ71 328 aa14.47□□□□□ -0.09
UBE3B-202ENST00000342494 PLD2O14939 933 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 SLC16A5O15375 505 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 CSTAP01040 98 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 HTR1AP08908 422 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 ZNF84P51523 738 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 MERTKQ12866 999 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 C4orf46Q504U0 113 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 LRIF1Q5T3J3 769 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 ZC3H14Q6PJT7 736 aaKnown RBP14.46□□□□□ -0.09
UBE3B-202ENST00000342494 AMIGO3Q86WK7 504 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 TREML1Q86YW5 311 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 ZNF283Q8N7M2 679 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 C7orf57Q8NEG2 295 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 DPH7Q9BTV6 452 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 IFT52Q9Y366 437 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 LATS1O95835 1130 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 MPC1LP0DKB6 136 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 CTSAP10619 480 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 MAD2L1BPQ15013 274 aaPredicted RBP14.46□□□□□ -0.09
UBE3B-202ENST00000342494 TRAM2Q15035 370 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 EGFLAMQ63HQ2 1017 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 RPS27LQ71UM5 84 aaKnown RBP14.46□□□□□ -0.09
UBE3B-202ENST00000342494 TMCO6Q96DC7 493 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 KLHL33A6NCF5 533 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 SDC3O75056 442 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 CREG1O75629 220 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 ENDOUP21128 410 aaKnown RBP14.46□□□□□ -0.09
UBE3B-202ENST00000342494 UQCRC2P22695 453 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 MECP2P51608 486 aaKnown RBP14.46□□□□□ -0.09
UBE3B-202ENST00000342494 WDR4P57081 412 aaKnown RBP14.46□□□□□ -0.09
UBE3B-202ENST00000342494 CBLBQ13191 982 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 CATSPEREQ5SY80 951 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 PRAMEF17Q5VTA0 474 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 KIAA0319Q5VV43 1072 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 OR10Q1Q8NGQ4 319 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 TMEM203Q969S6 136 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 PAAF1Q9BRP4 392 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 FBRSQ9HAH7 460 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 OAZ3Q9UMX2 235 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 A0A1W2PP18 115 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 C11orf98E9PRG8 122 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 H0YJX3 145 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 TLX2O43763 284 aaPredicted RBP14.46□□□□□ -0.09
UBE3B-202ENST00000342494 BEST1O76090 585 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 IFNA21P01568 189 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 THEGLP0DJG4 465 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 CD36P16671 472 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 SUOXP51687 545 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 LRP8Q14114 963 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 CCDC107Q8WV48 283 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 IMP4Q96G21 291 aaKnown RBP14.46□□□□□ -0.09
UBE3B-202ENST00000342494 SLC2A13Q96QE2 648 aa14.46□□□□□ -0.09
UBE3B-202ENST00000342494 PARP4Q9UKK3 1724 aaKnown RBP14.46□□□□□ -0.1
UBE3B-202ENST00000342494 FAM72CH0Y354 149 aa14.46□□□□□ -0.1
UBE3B-202ENST00000342494 CYBAP13498 195 aa14.46□□□□□ -0.1
UBE3B-202ENST00000342494 SLC15A1P46059 708 aa14.46□□□□□ -0.1
UBE3B-202ENST00000342494 HTRA3P83110 453 aa14.46□□□□□ -0.1
UBE3B-202ENST00000342494 RAB33AQ14088 237 aa14.46□□□□□ -0.1
UBE3B-202ENST00000342494 FAM72AQ5TYM5 149 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms