RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 IL1RAPQ9NPH3 570 aa11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 MKLN1Q9UL63 735 aa11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 GPR52Q9Y2T5 361 aa11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 WNT6Q9Y6F9 365 aa11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 PDPK1O15530 556 aa11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 PCCBP05166 539 aa11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 CXCR2P25025 360 aa11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 SDC2P34741 201 aa11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 GABARAPL2P60520 117 aa11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 ARF5P84085 180 aa11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 RPS26P11Q5JNZ5 115 aaPredicted RBP11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 ATAT1Q5SQI0 421 aa11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 NUDT18Q6ZVK8 323 aa11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 ARMCX6Q7L4S7 300 aa11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 TMEM179BQ7Z7N9 219 aa11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 MARCH9Q86YJ5 346 aa11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 TIGD4Q8IY51 512 aa11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 KCT2Q8NC54 265 aa11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 CHST14Q8NCH0 376 aa11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 OR10G6Q8NH81 332 aa11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 BPIFB1Q8TDL5 484 aa11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 CIDECQ96AQ7 238 aaPredicted RBP11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 TMEM121BQ9BXQ6 578 aaPredicted RBP11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 TP63Q9H3D4 680 aaPredicted RBP11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 KCNK12Q9HB15 430 aa11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 MOV10Q9HCE1 1003 aaKnown RBP11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 ELOVL2Q9NXB9 296 aa11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 PCDHGB6Q9Y5F9 930 aa11.96□□□□□ -0.5
SNRNP48-201ENST00000342415 PRAMEF33A0A0G2JMD5 474 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 PRAMEF10O60809 474 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 SLITRK5O94991 958 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 IL3P08700 152 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 FBXW4P57775 412 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 SPHARQ15513 63 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 CATSPEREQ5SY80 951 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 C22orf39Q6P5X5 142 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 CRTC1Q6UUV9 634 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 SBSNQ6UWP8 590 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 TMIGD1Q6UXZ0 262 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 OR6Q1Q8NGQ2 317 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 SORBS1Q9BX66 1292 aaKnown RBP11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 CERS4Q9HA82 394 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 PCDHGA10Q9Y5H3 936 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 A0A1W2PQ72 361 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 FAM227AF5H4B4 570 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 H7BY64 318 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 AQP9O43315 295 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 GMFGO60234 142 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 POP7O75817 140 aaKnown RBP11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 SEC14L2O76054 403 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 CD72P21854 359 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 MAT2AP31153 395 aaKnown RBP11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 RPL4P36578 427 aaKnown RBP11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 AQP6Q13520 282 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 GINS1Q14691 196 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 PROX2Q3B8N5 592 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 GPR149Q86SP6 731 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 CHPFQ8IZ52 775 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 DNASE1L2Q92874 299 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 NARS2Q96I59 477 aaKnown RBP11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 KCTD7Q96MP8 289 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 PRAP1Q96NZ9 151 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 SPATA5L1Q9BVQ7 753 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 CHIAQ9BZP6 476 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 SLC22A4Q9H015 551 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 GPN2Q9H9Y4 310 aaPredicted RBP11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 SARDHQ9UL12 918 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 CLCA1A8K7I4 914 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 CA12O43570 354 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 NOS1APO75052 506 aaPredicted RBP11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 SEMA3DO95025 777 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 HPGDP15428 266 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 RAB8AP61006 207 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 ZNF763Q0D2J5 394 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 TMEM115Q12893 351 aaPredicted RBP11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 SDE2Q6IQ49 451 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 FAM124AQ86V42 546 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 PTRH1Q86Y79 214 aaKnown RBP11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 FAM20CQ8IXL6 584 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 SLC22A12Q96S37 553 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 TSSK6Q9BXA6 273 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 HDHD5Q9BXW7 423 aa11.95□□□□□ -0.5
SNRNP48-201ENST00000342415 A0A1B0GVC2 190 aa11.94□□□□□ -0.5
SNRNP48-201ENST00000342415 A0A1W2PPK0 400 aa11.94□□□□□ -0.5
SNRNP48-201ENST00000342415 A6NIN4 97 aa11.94□□□□□ -0.5
SNRNP48-201ENST00000342415 LEFTY1O75610 366 aa11.94□□□□□ -0.5
SNRNP48-201ENST00000342415 NCBP2P52298 156 aaKnown RBP eCLIP11.94□□□□□ -0.52e-13■■□□□ 13.9
SNRNP48-201ENST00000342415 EMP3P54852 163 aa11.94□□□□□ -0.5
SNRNP48-201ENST00000342415 ZNF45Q02386 682 aa11.94□□□□□ -0.5
SNRNP48-201ENST00000342415 SUZ12Q15022 739 aaKnown RBP11.94□□□□□ -0.5
SNRNP48-201ENST00000342415 METTL3Q86U44 580 aaKnown RBP11.94□□□□□ -0.5
SNRNP48-201ENST00000342415 OXR1Q8N573 874 aa11.94□□□□□ -0.5
SNRNP48-201ENST00000342415 KCNN1Q92952 543 aa11.94□□□□□ -0.5
SNRNP48-201ENST00000342415 MAGEB10Q96LZ2 347 aaPredicted RBP11.94□□□□□ -0.5
SNRNP48-201ENST00000342415 RPS6KB2Q9UBS0 482 aa11.94□□□□□ -0.5
SNRNP48-201ENST00000342415 NUFIP1Q9UHK0 495 aaKnown RBP11.94□□□□□ -0.5
SNRNP48-201ENST00000342415 DRGXA6NNA5 263 aa11.94□□□□□ -0.5
SNRNP48-201ENST00000342415 WASH4PA8MWX3 477 aa11.94□□□□□ -0.5
SNRNP48-201ENST00000342415 MPZL2O60487 215 aa11.94□□□□□ -0.5
SNRNP48-201ENST00000342415 MMP20O60882 483 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms