RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 MAT2AP31153 395 aaKnown RBP12.43□□□□□ -0.42
USP47-202ENST00000339865 SP2Q02086 613 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 IRF5Q13568 498 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 NFIXQ14938 502 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 NFKBIDQ8NI38 313 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 TGIF2Q9GZN2 237 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 GLOD4Q9HC38 313 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 KLRF1Q9NZS2 232 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 ATP7AQ04656 1500 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 TNS3Q68CZ2 1445 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 OR7A17O14581 309 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 TXNDC12O95881 172 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 GSTM3P21266 225 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 GK2Q14410 553 aaPredicted RBP12.43□□□□□ -0.42
USP47-202ENST00000339865 C2orf27AQ580R0 203 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 ABHD13Q7L211 337 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 PAQR8Q8TEZ7 354 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 C16orf78Q8WTQ4 265 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 OSBPL7Q9BZF2 842 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 PCDHGA5Q9Y5G8 931 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 ATG2BQ96BY7 2078 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 GRM6O15303 877 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 S1PR1P21453 382 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 CCR8P51685 355 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 UGT2A3Q6UWM9 527 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 ZDHHC12Q96GR4 267 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 ISCA1Q9BUE6 129 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 SPATC1LQ9H0A9 340 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 PCBD2Q9H0N5 130 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 TMPRSS11EQ9UL52 423 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 YDJCA8MPS7 323 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 CCL22O00626 93 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 MSI1O43347 362 aaKnown RBP12.43□□□□□ -0.42
USP47-202ENST00000339865 OXSR1O95747 527 aaPredicted RBP12.43□□□□□ -0.42
USP47-202ENST00000339865 PRKCAP17252 672 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 ITPK1Q13572 414 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 C22orf42Q6IC83 251 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 TANGO2Q6ICL3 276 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 ZNF767PQ75MW2 155 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 TMPRSS12Q86WS5 348 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 OR6N1Q8NGY5 312 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 ESAMQ96AP7 390 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 MMP27Q9H306 513 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 PAK1IP1Q9NWT1 392 aaPredicted RBP12.43□□□□□ -0.42
USP47-202ENST00000339865 ATP10BO94823 1461 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 TMEM150CB9EJG8 249 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 GOT2P00505 430 aaKnown RBP12.43□□□□□ -0.42
USP47-202ENST00000339865 KLK1P06870 262 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 DCNP07585 359 aaKnown RBP12.43□□□□□ -0.42
USP47-202ENST00000339865 CKMT1AP12532 417 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 LAPTM4AQ15012 233 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 ZNF423Q2M1K9 1284 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 OR4Q3Q8NH05 313 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 MITD1Q8WV92 249 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 FOLH1BQ9HBA9 442 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 NLGN3Q9NZ94 848 aa12.43□□□□□ -0.42
USP47-202ENST00000339865 LCMT2O60294 686 aaKnown RBP12.42□□□□□ -0.42
USP47-202ENST00000339865 DDNO94850 711 aaPredicted RBP12.42□□□□□ -0.42
USP47-202ENST00000339865 MT-CYBP00156 380 aaPredicted RBP12.42□□□□□ -0.42
USP47-202ENST00000339865 NPBWR1P48145 328 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 KIAA1614Q5VZ46 1190 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 DCLRE1AQ6PJP8 1040 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 SSX9Q7RTT3 188 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 PHOSPHO1Q8TCT1 267 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 SLC35C1Q96A29 364 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 FBXL20Q96IG2 436 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 FUNDC2Q9BWH2 189 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 MEIS3P2A8K0S8 358 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 ANGPTL7O43827 346 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 TMEM11P17152 192 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 ENDOUP21128 410 aaKnown RBP12.42□□□□□ -0.42
USP47-202ENST00000339865 CERS1P27544 350 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 TDGQ13569 410 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 TATDN1Q6P1N9 297 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 PDSS2Q86YH6 399 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 PLA2G15Q8NCC3 412 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 ASB9Q96DX5 294 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 YTHDF1Q9BYJ9 559 aaKnown RBP12.42□□□□□ -0.42
USP47-202ENST00000339865 TEX10Q9NXF1 929 aaPredicted RBP12.42□□□□□ -0.42
USP47-202ENST00000339865 C9J4A7 227 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 SOX1O00570 391 aaPredicted RBP12.42□□□□□ -0.42
USP47-202ENST00000339865 NKRFO15226 690 aaKnown RBP eCLIP12.42□□□□□ -0.42
USP47-202ENST00000339865 SLC31A1O15431 190 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 C8GP07360 202 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 RIDAP52758 137 aaKnown RBP12.42□□□□□ -0.42
USP47-202ENST00000339865 CTC1Q2NKJ3 1217 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.42□□□□□ -0.42
USP47-202ENST00000339865 NOMO2Q5JPE7 1267 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 TMEM220Q6QAJ8 160 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 CPA6Q8N4T0 437 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 FAM86B1Q8N7N1 296 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 BEST4Q8NFU0 473 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 ADAM19Q9H013 955 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 TP53TG5Q9Y2B4 290 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 GXYLT2A0PJZ3 443 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 ANKRD63C9JTQ0 380 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 MPPED1O15442 326 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 CLIC3O95833 236 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 HSD11B2P80365 405 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 SLC36A4Q6YBV0 504 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms