RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 C17orf62Q9BQA9 187 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 C11orf84Q9BUA3 381 aaPredicted RBP13.26□□□□□ -0.29
RTN4-202ENST00000337526 IFT46Q9NQC8 304 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 SDR39U1Q9NRG7 319 aaPredicted RBP13.26□□□□□ -0.29
RTN4-202ENST00000337526 EVA1BQ9NVM1 165 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 SRRDQ9UH36 339 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 MYO10Q9HD67 2058 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 RHPN2P1A8MT19 583 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 CAPN14A8MX76 684 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 TMEM150CB9EJG8 249 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 TSPAN6O43657 245 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 CKMT1AP12532 417 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 MYF6P23409 242 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 F8A1P23610 371 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 IL4RP24394 825 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 MAP3K8P41279 467 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 AP2S1P53680 142 aaPredicted RBP13.26□□□□□ -0.29
RTN4-202ENST00000337526 HNRNPA0Q13151 305 aaKnown RBP13.26□□□□□ -0.29
RTN4-202ENST00000337526 TRAM2Q15035 370 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 SLC35F1Q5T1Q4 408 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 ABHD13Q7L211 337 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 CARM1Q86X55 608 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 CST11Q9H112 138 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 IFNA7P01567 189 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 TCEA1P23193 301 aaKnown RBP13.25□□□□□ -0.29
RTN4-202ENST00000337526 ACRV1P26436 265 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 HTR6P50406 440 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 DNAJA4Q8WW22 397 aaPredicted RBP13.25□□□□□ -0.29
RTN4-202ENST00000337526 TMEM40Q8WWA1 233 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 OVCA2Q8WZ82 227 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 SLC25A36Q96CQ1 311 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 DPH2Q9BQC3 489 aaPredicted RBP13.25□□□□□ -0.29
RTN4-202ENST00000337526 SMG9Q9H0W8 520 aaKnown RBP13.25□□□□□ -0.29
RTN4-202ENST00000337526 PLAGL1Q9UM63 463 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 CMAHPQ9Y471 501 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 PCDHB11Q9Y5F2 797 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 AOC2O75106 756 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 TIA1P31483 386 aaKnown RBP eCLIP13.25□□□□□ -0.294e-8■■■□□ 16.3
RTN4-202ENST00000337526 STK19P49842 368 aaPredicted RBP13.25□□□□□ -0.29
RTN4-202ENST00000337526 GATMP50440 423 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 NFATC3Q12968 1075 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 ENPP2Q13822 863 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 OR52E4Q8NGH9 312 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 MCHR1Q99705 422 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 FUZQ9BT04 418 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 RETREG1Q9H6L5 497 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 LYARQ9NX58 379 aaKnown RBP13.25□□□□□ -0.29
RTN4-202ENST00000337526 PCTPQ9UKL6 214 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 EDDM13A0A1B0GTR0 161 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 PCP4L1A6NKN8 68 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 WRBO00258 174 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 LEFTY2O00292 366 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 SLC1A7O00341 560 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 PROM1O43490 865 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 MTRF1O75570 445 aaKnown RBP13.25□□□□□ -0.29
RTN4-202ENST00000337526 GABBR2O75899 941 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 C1GALT1C1LP0DN25 315 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 CCND3P30281 292 aaPredicted RBP13.25□□□□□ -0.29
RTN4-202ENST00000337526 ETV3P41162 512 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 MAGEA6P43360 314 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 BLKP51451 505 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 MLLT1Q03111 559 aaPredicted RBP13.25□□□□□ -0.29
RTN4-202ENST00000337526 CLCA4Q14CN2 919 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 ENPP6Q6UWR7 440 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 ZSWIM9Q86XI8 627 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 PROKR2Q8NFJ6 384 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 OR4E2Q8NGC2 313 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 SIPA1Q96FS4 1042 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 MNTQ99583 582 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 HCN2Q9UL51 889 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 PENKP01210 267 aaPredicted RBP13.25□□□□□ -0.29
RTN4-202ENST00000337526 STSP08842 583 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 DOC2AQ14183 400 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 CTC1Q2NKJ3 1217 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 LIPKQ5VXJ0 399 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 SLC36A4Q6YBV0 504 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 ARMC10Q8N2F6 343 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 SDR16C5Q8N3Y7 309 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 OSTF1Q92882 214 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 GLYATL1Q969I3 302 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 ADAD1Q96M93 576 aaKnown RBP13.25□□□□□ -0.29
RTN4-202ENST00000337526 TRIB3Q96RU7 358 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 ANKRD60Q9BZ19 345 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 ARMC1Q9NVT9 282 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 NLGN3Q9NZ94 848 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 NENFQ9UMX5 172 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 CLCA3PQ9Y6N3 262 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 KNL1Q8NG31 2342 aa13.25□□□□□ -0.29
RTN4-202ENST00000337526 PSMD9O00233 223 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 KMOO15229 486 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 LEFTY1O75610 366 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 SOD2P04179 222 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 PRSS56P0CW18 603 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 JUPP14923 745 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 UQCRC2P22695 453 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 ERVPABLB-1P60509 514 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 PMS2P3Q13401 168 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 KANK2Q63ZY3 851 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 GPALPP1Q8IXQ4 340 aa13.24□□□□□ -0.29
RTN4-202ENST00000337526 C7orf57Q8NEG2 295 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms