RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 SMOQ99835 787 aa12.78□□□□□ -0.36
COL2A1-201ENST00000337299 GPRC5BQ9NZH0 403 aa12.78□□□□□ -0.36
COL2A1-201ENST00000337299 STUB1Q9UNE7 303 aa12.78□□□□□ -0.36
COL2A1-201ENST00000337299 OR2AG2A6NM03 316 aa12.77□□□□□ -0.36
COL2A1-201ENST00000337299 ZNF879B4DU55 563 aa12.77□□□□□ -0.36
COL2A1-201ENST00000337299 C22orf31O95567 290 aa12.77□□□□□ -0.36
COL2A1-201ENST00000337299 HRGP04196 525 aa12.77□□□□□ -0.36
COL2A1-201ENST00000337299 SRPRAP08240 638 aaKnown RBP12.77□□□□□ -0.36
COL2A1-201ENST00000337299 ADORA3P0DMS8 318 aa12.77□□□□□ -0.36
COL2A1-201ENST00000337299 KELP23276 732 aa12.77□□□□□ -0.36
COL2A1-201ENST00000337299 PTX3P26022 381 aaPredicted RBP12.77□□□□□ -0.36
COL2A1-201ENST00000337299 PPP3R1P63098 170 aa12.77□□□□□ -0.36
COL2A1-201ENST00000337299 EIF2B5Q13144 721 aaKnown RBP12.77□□□□□ -0.36
COL2A1-201ENST00000337299 TRAPPC5Q8IUR0 188 aa12.77□□□□□ -0.36
COL2A1-201ENST00000337299 OXR1Q8N573 874 aa12.77□□□□□ -0.36
COL2A1-201ENST00000337299 OR5J2Q8NH18 312 aa12.77□□□□□ -0.36
COL2A1-201ENST00000337299 RHEBL1Q8TAI7 183 aa12.77□□□□□ -0.36
COL2A1-201ENST00000337299 QRFPRQ96P65 431 aa12.77□□□□□ -0.36
COL2A1-201ENST00000337299 PPA2Q9H2U2 334 aa12.77□□□□□ -0.36
COL2A1-201ENST00000337299 SMOC2Q9H3U7 446 aa12.77□□□□□ -0.36
COL2A1-201ENST00000337299 FOLH1BQ9HBA9 442 aa12.77□□□□□ -0.36
COL2A1-201ENST00000337299 IRAK3Q9Y616 596 aa12.77□□□□□ -0.36
COL2A1-201ENST00000337299 IRS2Q9Y4H2 1338 aa12.77□□□□□ -0.36
COL2A1-201ENST00000337299 FXYD1O00168 92 aa12.77□□□□□ -0.37
COL2A1-201ENST00000337299 ALPIP09923 528 aa12.77□□□□□ -0.37
COL2A1-201ENST00000337299 CYP2A6P11509 494 aaPredicted RBP12.77□□□□□ -0.37
COL2A1-201ENST00000337299 SCNN1AP37088 669 aa12.77□□□□□ -0.37
COL2A1-201ENST00000337299 SMSP52788 366 aa12.77□□□□□ -0.37
COL2A1-201ENST00000337299 DSG2Q14126 1118 aa12.77□□□□□ -0.37
COL2A1-201ENST00000337299 LRRC37A5PQ49AS3 106 aa12.77□□□□□ -0.37
COL2A1-201ENST00000337299 TPGS1Q6ZTW0 290 aa12.77□□□□□ -0.37
COL2A1-201ENST00000337299 IQCF1Q8N6M8 205 aa12.77□□□□□ -0.37
COL2A1-201ENST00000337299 TESCQ96BS2 214 aa12.77□□□□□ -0.37
COL2A1-201ENST00000337299 MNTQ99583 582 aa12.77□□□□□ -0.37
COL2A1-201ENST00000337299 PLAC1Q9HBJ0 212 aa12.77□□□□□ -0.37
COL2A1-201ENST00000337299 GLYATL1P3A0A0U1RQE8 302 aa12.77□□□□□ -0.37
COL2A1-201ENST00000337299 H3BSH0 61 aa12.77□□□□□ -0.37
COL2A1-201ENST00000337299 INSIG1O15503 277 aa12.77□□□□□ -0.37
COL2A1-201ENST00000337299 ASMTP46597 345 aa12.77□□□□□ -0.37
COL2A1-201ENST00000337299 KCNQ1P51787 676 aa12.77□□□□□ -0.37
COL2A1-201ENST00000337299 IFITM3Q01628 133 aa12.77□□□□□ -0.37
COL2A1-201ENST00000337299 SP3Q02447 781 aa12.77□□□□□ -0.37
COL2A1-201ENST00000337299 MLLT1Q03111 559 aaPredicted RBP12.77□□□□□ -0.37
COL2A1-201ENST00000337299 CACNG1Q06432 222 aa12.77□□□□□ -0.37
COL2A1-201ENST00000337299 TAF10Q12962 218 aa12.77□□□□□ -0.37
COL2A1-201ENST00000337299 KEAP1Q14145 624 aa12.77□□□□□ -0.37
COL2A1-201ENST00000337299 ARHGAP15Q53QZ3 475 aa12.77□□□□□ -0.37
COL2A1-201ENST00000337299 LRRC73Q5JTD7 316 aa12.77□□□□□ -0.37
COL2A1-201ENST00000337299 ATXN7L2Q5T6C5 722 aaPredicted RBP12.77□□□□□ -0.37
COL2A1-201ENST00000337299 CPZQ66K79 652 aa12.77□□□□□ -0.37
COL2A1-201ENST00000337299 ADNP2Q6IQ32 1131 aa12.77□□□□□ -0.37
COL2A1-201ENST00000337299 GPRIN1Q7Z2K8 1008 aa12.77□□□□□ -0.37
COL2A1-201ENST00000337299 MON1AQ86VX9 555 aa12.77□□□□□ -0.37
COL2A1-201ENST00000337299 C1orf216Q8TAB5 229 aa12.77□□□□□ -0.37
COL2A1-201ENST00000337299 SLC5A11Q8WWX8 675 aa12.77□□□□□ -0.37
COL2A1-201ENST00000337299 GEMIN6Q8WXD5 167 aaKnown RBP12.77□□□□□ -0.37
COL2A1-201ENST00000337299 UPF1Q92900 1129 aaKnown RBP eCLIP12.77□□□□□ -0.37
COL2A1-201ENST00000337299 PCYT2Q99447 389 aa12.77□□□□□ -0.37
COL2A1-201ENST00000337299 RUVBL1Q9Y265 456 aaKnown RBP12.77□□□□□ -0.37
COL2A1-201ENST00000337299 HS3ST4Q9Y661 456 aa12.77□□□□□ -0.37
COL2A1-201ENST00000337299 MYO7AQ13402 2215 aa12.77□□□□□ -0.37
COL2A1-201ENST00000337299 WNT9AO14904 365 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 PCDH17O14917 1159 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 AXIN1O15169 862 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 AKAP8O43823 692 aaKnown RBP12.76□□□□□ -0.37
COL2A1-201ENST00000337299 PKLRP30613 574 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 CDKN1CP49918 316 aaPredicted RBP12.76□□□□□ -0.37
COL2A1-201ENST00000337299 GINS1Q14691 196 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 SMCO1Q147U7 214 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 C4orf46Q504U0 113 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 CARD16Q5EG05 197 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 FRG2Q64ET8 278 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 RAB8BQ92930 207 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 SGTBQ96EQ0 304 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 FRG2BQ96QU4 278 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 YIPF4Q9BSR8 244 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 OSGEPL1Q9H4B0 414 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 MGAT4CQ9UBM8 478 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 CD84Q9UIB8 345 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 TRPV2Q9Y5S1 764 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 A0A075B6Q4 140 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 ANKRD28O15084 1053 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 BCHEP06276 602 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 H1F0P07305 194 aaKnown RBP12.76□□□□□ -0.37
COL2A1-201ENST00000337299 PEPDP12955 493 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 DARSP14868 501 aaKnown RBP12.76□□□□□ -0.37
COL2A1-201ENST00000337299 DDOSTP39656 456 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 ERVK-25P63136 954 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 CAMK2BQ13554 666 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 LRRC32Q14392 662 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 AAK1Q2M2I8 961 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 GTF2IRD2BQ6EKJ0 949 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 GTF2IRD2Q86UP8 949 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 RPLP0P6Q8NHW5 317 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 MRPS31Q92665 395 aaKnown RBP12.76□□□□□ -0.37
COL2A1-201ENST00000337299 BTN2A3PQ96KV6 586 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 ZNF285Q96NJ3 590 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 HMX1Q9NP08 348 aaPredicted RBP12.76□□□□□ -0.37
COL2A1-201ENST00000337299 KCTD5Q9NXV2 234 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 EMC3Q9P0I2 261 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms