RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 IKZF4Q9H2S9 585 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 GSKIPQ9P0R6 139 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 PRODH2Q9UF12 536 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 USP2O75604 605 aaPredicted RBP12.65□□□□□ -0.38
HLCS-201ENST00000336648 CDKN2CP42773 168 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 ZNF783Q6ZMS7 281 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 ZNF598Q86UK7 904 aaKnown RBP12.65□□□□□ -0.38
HLCS-201ENST00000336648 OR4F6Q8NGB9 312 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 NINJ1Q92982 152 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 TREX2Q9BQ50 279 aaPredicted RBP12.65□□□□□ -0.38
HLCS-201ENST00000336648 GNG13Q9P2W3 67 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 HCN2Q9UL51 889 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 IGKV6D-41A0A0C4DH26 115 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 KLHL33A6NCF5 533 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 ELNP15502 786 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 UQCRC2P22695 453 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 MAT2AP31153 395 aaKnown RBP12.65□□□□□ -0.38
HLCS-201ENST00000336648 UQCRC1P31930 480 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 CHRNA4P43681 627 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 SOX9P48436 509 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 ZNF41P51814 821 aaPredicted RBP12.65□□□□□ -0.38
HLCS-201ENST00000336648 TMBIM6P55061 237 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 LRRC66Q68CR7 880 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 TMEM234Q8WY98 164 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 PBDC1Q9BVG4 233 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 TRMT61BQ9BVS5 477 aaKnown RBP12.65□□□□□ -0.38
HLCS-201ENST00000336648 ASB6Q9NWX5 421 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 UNCXA6NJT0 531 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 ANKRD66B4E2M5 251 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 CAPN5O15484 640 aaPredicted RBP12.65□□□□□ -0.38
HLCS-201ENST00000336648 PLATP00750 562 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 CHRM5P08912 532 aaPredicted RBP12.65□□□□□ -0.38
HLCS-201ENST00000336648 STC1P52823 247 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 OC90Q02509 493 aaPredicted RBP12.65□□□□□ -0.38
HLCS-201ENST00000336648 BNIP3Q12983 259 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 RAB39AQ14964 217 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 ATG9BQ674R7 924 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 LYSMD3Q7Z3D4 306 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 ZER1Q7Z7L7 766 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 UBQLNLQ8IYU4 475 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 KCNJ9Q92806 393 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 KLRF1Q9NZS2 232 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 TAC3Q9UHF0 121 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 SH2B3Q9UQQ2 575 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 SLC22A14Q9Y267 594 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 POP7O75817 140 aaKnown RBP12.65□□□□□ -0.38
HLCS-201ENST00000336648 RBMXP38159 391 aaKnown RBP12.65□□□□□ -0.38
HLCS-201ENST00000336648 MAGEA11P43364 429 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 C3orf33Q6P1S2 294 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 KCTD18Q6PI47 426 aaPredicted RBP12.65□□□□□ -0.38
HLCS-201ENST00000336648 PRSS55Q6UWB4 352 aaPredicted RBP12.65□□□□□ -0.38
HLCS-201ENST00000336648 METTL25Q8N6Q8 603 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 DCAF4L2Q8NA75 395 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 GOLM1Q8NBJ4 401 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 OR6N1Q8NGY5 312 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 LRCH3Q96II8 777 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 WACQ9BTA9 647 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 TMED9Q9BVK6 235 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 OR10A4Q9H209 315 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 ENAMQ9NRM1 1142 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 LATS1O95835 1130 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 RPL35P42766 123 aaKnown RBP12.65□□□□□ -0.38
HLCS-201ENST00000336648 SELENOVP59797 346 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 SLC3A1Q07837 685 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 ANKDD1AQ495B1 522 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 BEND4Q6ZU67 534 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 PDSS2Q86YH6 399 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 PRSS58Q8IYP2 241 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 OR9A1PQ8NGU1 263 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 TFGQ92734 400 aaPredicted RBP12.65□□□□□ -0.38
HLCS-201ENST00000336648 PELOQ9BRX2 385 aaKnown RBP12.65□□□□□ -0.38
HLCS-201ENST00000336648 LAMP5Q9UJQ1 280 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 TMPRSS11EQ9UL52 423 aa12.65□□□□□ -0.38
HLCS-201ENST00000336648 TTLL8A6PVC2 850 aa12.64□□□□□ -0.39
HLCS-201ENST00000336648 SAP18O00422 153 aaKnown RBP12.64□□□□□ -0.39
HLCS-201ENST00000336648 IFNA5P01569 189 aa12.64□□□□□ -0.39
HLCS-201ENST00000336648 PTPN6P29350 595 aa12.64□□□□□ -0.39
HLCS-201ENST00000336648 CLCNKAP51800 687 aa12.64□□□□□ -0.39
HLCS-201ENST00000336648 KLF1Q13351 362 aaPredicted RBP12.64□□□□□ -0.39
HLCS-201ENST00000336648 PON2Q15165 354 aa12.64□□□□□ -0.39
HLCS-201ENST00000336648 C7orf61Q8IZ16 206 aa12.64□□□□□ -0.39
HLCS-201ENST00000336648 CD244Q9BZW8 370 aa12.64□□□□□ -0.39
HLCS-201ENST00000336648 SEC61A2Q9H9S3 476 aa12.64□□□□□ -0.39
HLCS-201ENST00000336648 CTPS2Q9NRF8 586 aa12.64□□□□□ -0.39
HLCS-201ENST00000336648 GNG8Q9UK08 70 aa12.64□□□□□ -0.39
HLCS-201ENST00000336648 SLC45A1Q9Y2W3 748 aa12.64□□□□□ -0.39
HLCS-201ENST00000336648 ZNF705FA8MVS1 300 aaPredicted RBP12.64□□□□□ -0.39
HLCS-201ENST00000336648 C2orf74A8MZ97 194 aa12.64□□□□□ -0.39
HLCS-201ENST00000336648 SMAD9O15198 467 aaKnown RBP12.64□□□□□ -0.39
HLCS-201ENST00000336648 ITM2AO43736 263 aa12.64□□□□□ -0.39
HLCS-201ENST00000336648 TLX2O43763 284 aaPredicted RBP12.64□□□□□ -0.39
HLCS-201ENST00000336648 SCGB2A1O75556 95 aa12.64□□□□□ -0.39
HLCS-201ENST00000336648 ZNF705DP0CH99 300 aaPredicted RBP12.64□□□□□ -0.39
HLCS-201ENST00000336648 ZNF705BP0CI00 300 aaPredicted RBP12.64□□□□□ -0.39
HLCS-201ENST00000336648 IL7P13232 177 aa12.64□□□□□ -0.39
HLCS-201ENST00000336648 ZNF763Q0D2J5 394 aa12.64□□□□□ -0.39
HLCS-201ENST00000336648 POU4F2Q12837 409 aa12.64□□□□□ -0.39
HLCS-201ENST00000336648 TBRG1Q3YBR2 411 aa12.64□□□□□ -0.39
HLCS-201ENST00000336648 CYBRD1Q53TN4 286 aa12.64□□□□□ -0.39
HLCS-201ENST00000336648 RELL1Q8IUW5 271 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms