RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 MICAQ29983 383 aa22.4■■□□□ 1.18
NDEL1-201ENST00000334527 C10orf62Q5T681 223 aaPredicted RBP22.4■■□□□ 1.18
NDEL1-201ENST00000334527 TRMT11Q7Z4G4 463 aaKnown RBP22.4■■□□□ 1.18
NDEL1-201ENST00000334527 RNF130Q86XS8 419 aa22.4■■□□□ 1.18
NDEL1-201ENST00000334527 SLC5A11Q8WWX8 675 aa22.4■■□□□ 1.18
NDEL1-201ENST00000334527 FCGR1BQ92637 280 aa22.4■■□□□ 1.18
NDEL1-201ENST00000334527 SLC38A4Q969I6 547 aa22.4■■□□□ 1.18
NDEL1-201ENST00000334527 NIPSNAP1Q9BPW8 284 aa22.4■■□□□ 1.18
NDEL1-201ENST00000334527 MROQ9BYG7 248 aa22.4■■□□□ 1.18
NDEL1-201ENST00000334527 EHD1Q9H4M9 534 aa22.4■■□□□ 1.18
NDEL1-201ENST00000334527 MYNNQ9NPC7 610 aa22.4■■□□□ 1.18
NDEL1-201ENST00000334527 C1GALT1Q9NS00 363 aa22.4■■□□□ 1.18
NDEL1-201ENST00000334527 TRNAU1APQ9NX07 287 aaKnown RBP22.4■■□□□ 1.18
NDEL1-201ENST00000334527 POFUT2Q9Y2G5 429 aa22.4■■□□□ 1.18
NDEL1-201ENST00000334527 TMEM247A6NEH6 219 aa22.4■■□□□ 1.18
NDEL1-201ENST00000334527 PSMD11O00231 422 aa22.4■■□□□ 1.18
NDEL1-201ENST00000334527 ANXA8P13928 327 aa22.4■■□□□ 1.18
NDEL1-201ENST00000334527 IRS1P35568 1242 aa22.4■■□□□ 1.18
NDEL1-201ENST00000334527 RPL3P39023 403 aaKnown RBP22.4■■□□□ 1.18
NDEL1-201ENST00000334527 IDH2P48735 452 aaKnown RBP22.4■■□□□ 1.18
NDEL1-201ENST00000334527 PXNP49023 591 aaPredicted RBP22.4■■□□□ 1.18
NDEL1-201ENST00000334527 CDK6Q00534 326 aa22.4■■□□□ 1.18
NDEL1-201ENST00000334527 TAP2Q03519 686 aa22.4■■□□□ 1.18
NDEL1-201ENST00000334527 C1orf53Q5VUE5 145 aa22.4■■□□□ 1.18
NDEL1-201ENST00000334527 FAM71E1Q6IPT2 247 aa22.4■■□□□ 1.18
NDEL1-201ENST00000334527 TRIM40Q6P9F5 258 aa22.4■■□□□ 1.18
NDEL1-201ENST00000334527 CCDC103Q8IW40 242 aa22.4■■□□□ 1.18
NDEL1-201ENST00000334527 MYDGFQ969H8 173 aa22.4■■□□□ 1.18
NDEL1-201ENST00000334527 ZHX1-C8orf76Q96EF9 292 aa22.4■■□□□ 1.18
NDEL1-201ENST00000334527 ZCCHC2Q9C0B9 1178 aaKnown RBP22.4■■□□□ 1.18
NDEL1-201ENST00000334527 SLIRPQ9GZT3 109 aaKnown RBP22.4■■□□□ 1.18
NDEL1-201ENST00000334527 TMEM38AQ9H6F2 299 aa22.4■■□□□ 1.18
NDEL1-201ENST00000334527 PLCXD1Q9NUJ7 323 aa22.4■■□□□ 1.18
NDEL1-201ENST00000334527 PCDHGA2Q9Y5H1 932 aa22.4■■□□□ 1.18
NDEL1-201ENST00000334527 EFCAB14O75071 495 aa22.39■■□□□ 1.18
NDEL1-201ENST00000334527 KLHL18O94889 574 aa22.39■■□□□ 1.18
NDEL1-201ENST00000334527 PTX3P26022 381 aaPredicted RBP22.39■■□□□ 1.18
NDEL1-201ENST00000334527 LIPAP38571 399 aa22.39■■□□□ 1.18
NDEL1-201ENST00000334527 SLC19A1P41440 591 aa22.39■■□□□ 1.18
NDEL1-201ENST00000334527 DGKGP49619 791 aa22.39■■□□□ 1.18
NDEL1-201ENST00000334527 PRSS36Q5K4E3 855 aa22.39■■□□□ 1.18
NDEL1-201ENST00000334527 NXPE4Q6UWF7 544 aa22.39■■□□□ 1.18
NDEL1-201ENST00000334527 DNAJC22Q8N4W6 341 aa22.39■■□□□ 1.18
NDEL1-201ENST00000334527 RHOXF1Q8NHV9 184 aa22.39■■□□□ 1.18
NDEL1-201ENST00000334527 THSD1Q9NS62 852 aa22.39■■□□□ 1.18
NDEL1-201ENST00000334527 TAS2R9Q9NYW1 312 aa22.39■■□□□ 1.18
NDEL1-201ENST00000334527 PTPRSQ13332 1948 aa22.39■■□□□ 1.17
NDEL1-201ENST00000334527 J3KTA2 159 aa22.39■■□□□ 1.17
NDEL1-201ENST00000334527 SPINT1O43278 529 aa22.39■■□□□ 1.17
NDEL1-201ENST00000334527 SOAT1P35610 550 aa22.39■■□□□ 1.17
NDEL1-201ENST00000334527 IFITM3Q01628 133 aa22.39■■□□□ 1.17
NDEL1-201ENST00000334527 EEF1A2Q05639 463 aaKnown RBP22.39■■□□□ 1.17
NDEL1-201ENST00000334527 ELOAQ14241 798 aaKnown RBP22.39■■□□□ 1.17
NDEL1-201ENST00000334527 PRSS53Q2L4Q9 553 aa22.39■■□□□ 1.17
NDEL1-201ENST00000334527 CCDC80Q76M96 950 aa22.39■■□□□ 1.17
NDEL1-201ENST00000334527 METTL4Q8N3J2 472 aa22.39■■□□□ 1.17
NDEL1-201ENST00000334527 ZNF740Q8NDX6 193 aa22.39■■□□□ 1.17
NDEL1-201ENST00000334527 NEURL2Q9BR09 285 aa22.39■■□□□ 1.17
NDEL1-201ENST00000334527 OSGIN1Q9UJX0 560 aa22.39■■□□□ 1.17
NDEL1-201ENST00000334527 ITGA2P17301 1181 aa22.38■■□□□ 1.17
NDEL1-201ENST00000334527 CLK1P49759 484 aaKnown RBP22.38■■□□□ 1.17
NDEL1-201ENST00000334527 NUDT6P53370 316 aa22.38■■□□□ 1.17
NDEL1-201ENST00000334527 ST8SIA6P61647 398 aa22.38■■□□□ 1.17
NDEL1-201ENST00000334527 FPGSQ05932 587 aa22.38■■□□□ 1.17
NDEL1-201ENST00000334527 TBCEQ15813 527 aaPredicted RBP22.38■■□□□ 1.17
NDEL1-201ENST00000334527 RAET1GQ6H3X3 334 aa22.38■■□□□ 1.17
NDEL1-201ENST00000334527 OR9Q2Q8NGE9 314 aa22.38■■□□□ 1.17
NDEL1-201ENST00000334527 GGHQ92820 318 aa22.38■■□□□ 1.17
NDEL1-201ENST00000334527 OTUB2Q96DC9 234 aa22.38■■□□□ 1.17
NDEL1-201ENST00000334527 CCDC177Q9NQR7 707 aaPredicted RBP22.38■■□□□ 1.17
NDEL1-201ENST00000334527 ITM2CQ9NQX7 267 aa22.38■■□□□ 1.17
NDEL1-201ENST00000334527 MTCL1Q9Y4B5 1905 aaKnown RBP22.38■■□□□ 1.17
NDEL1-201ENST00000334527 A0A1W2PRB8 838 aa22.38■■□□□ 1.17
NDEL1-201ENST00000334527 CLCA1A8K7I4 914 aa22.38■■□□□ 1.17
NDEL1-201ENST00000334527 ZNF630Q2M218 657 aaPredicted RBP22.38■■□□□ 1.17
NDEL1-201ENST00000334527 MLIPQ5VWP3 458 aa22.38■■□□□ 1.17
NDEL1-201ENST00000334527 PAGE2Q7Z2X7 111 aa22.38■■□□□ 1.17
NDEL1-201ENST00000334527 LRRC56Q8IYG6 542 aaPredicted RBP22.38■■□□□ 1.17
NDEL1-201ENST00000334527 UTP15Q8TED0 518 aaKnown RBP22.38■■□□□ 1.17
NDEL1-201ENST00000334527 M0R082 166 aa22.37■■□□□ 1.17
NDEL1-201ENST00000334527 CDK1P06493 297 aa22.37■■□□□ 1.17
NDEL1-201ENST00000334527 IL3P08700 152 aa22.37■■□□□ 1.17
NDEL1-201ENST00000334527 GPR1P46091 355 aa22.37■■□□□ 1.17
NDEL1-201ENST00000334527 DHCR24Q15392 516 aa22.37■■□□□ 1.17
NDEL1-201ENST00000334527 GEMIN6Q8WXD5 167 aaKnown RBP22.37■■□□□ 1.17
NDEL1-201ENST00000334527 ING5Q8WYH8 240 aa22.37■■□□□ 1.17
NDEL1-201ENST00000334527 NUS1Q96E22 293 aa22.37■■□□□ 1.17
NDEL1-201ENST00000334527 ZBTB20Q9HC78 741 aaPredicted RBP22.37■■□□□ 1.17
NDEL1-201ENST00000334527 ZNF226Q9NYT6 803 aa22.37■■□□□ 1.17
NDEL1-201ENST00000334527 LRRK1Q38SD2 2015 aa22.37■■□□□ 1.17
NDEL1-201ENST00000334527 PRAMEF33A0A0G2JMD5 474 aa22.36■■□□□ 1.17
NDEL1-201ENST00000334527 AIREO43918 545 aa22.36■■□□□ 1.17
NDEL1-201ENST00000334527 PRAMEF10O60809 474 aa22.36■■□□□ 1.17
NDEL1-201ENST00000334527 CISD3P0C7P0 127 aa22.36■■□□□ 1.17
NDEL1-201ENST00000334527 TIGD6Q17RP2 521 aa22.36■■□□□ 1.17
NDEL1-201ENST00000334527 CRB2Q5IJ48 1285 aa22.36■■□□□ 1.17
NDEL1-201ENST00000334527 MMP21Q8N119 569 aa22.36■■□□□ 1.17
NDEL1-201ENST00000334527 SORBS1Q9BX66 1292 aaKnown RBP22.36■■□□□ 1.17
NDEL1-201ENST00000334527 DCSTAMPQ9H295 470 aa22.36■■□□□ 1.17
NDEL1-201ENST00000334527 ZNF556Q9HAH1 456 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms