RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 ARL11Q969Q4 196 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 CDCA5Q96FF9 252 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 LHPPQ9H008 270 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 WDR45Q9Y484 360 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 MAGED1Q9Y5V3 778 aaPredicted RBP9.49□□□□□ -0.89
COL4A6-201ENST00000334504 DLC1Q96QB1 1528 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 HAS3O00219 553 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 OPRL1P41146 370 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 YBEYP58557 167 aaPredicted RBP9.49□□□□□ -0.89
COL4A6-201ENST00000334504 GABARAPL2P60520 117 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 ENPP2Q13822 863 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 GINS1Q14691 196 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 GSG1LQ6UXU4 331 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 CHST9Q7L1S5 443 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 VWA5B2Q8N398 1253 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 TRIB2Q92519 343 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 RIT1Q92963 219 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 GIMAP5Q96F15 307 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 SLC25A44Q96H78 314 aaPredicted RBP9.49□□□□□ -0.89
COL4A6-201ENST00000334504 TMEM68Q96MH6 324 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 ZNF558Q96NG5 402 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 LRFN1Q9P244 771 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 CDC14AQ9UNH5 594 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 WASF3Q9UPY6 502 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 DIP2AQ14689 1571 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 A0A1B0GVI7 797 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 A6NHS1 94 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 A8MVJ9 347 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 AKR1C4P17516 323 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 KELP23276 732 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 CDKN1CP49918 316 aaPredicted RBP9.48□□□□□ -0.89
COL4A6-201ENST00000334504 IDH3GP51553 393 aaPredicted RBP9.48□□□□□ -0.89
COL4A6-201ENST00000334504 IL10RBQ08334 325 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 SNTA1Q13424 505 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 GALEQ14376 348 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 TRAM1Q15629 374 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 SPANXN4Q5MJ08 99 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 NUDT13Q86X67 352 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 SAMD14Q8IZD0 417 aaPredicted RBP9.48□□□□□ -0.89
COL4A6-201ENST00000334504 OVCA2Q8WZ82 227 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 PTERQ96BW5 349 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 CYP2S1Q96SQ9 504 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 UQCC2Q9BRT2 126 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.48□□□□□ -0.89
COL4A6-201ENST00000334504 FAM118AQ9NWS6 357 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 FBXW11Q9UKB1 542 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 HSBP1L1C9JCN9 74 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 IRF6O14896 467 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 UPK1BO75841 260 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 WDPCPO95876 746 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 HNRNPFP52597 415 aaKnown RBP9.48□□□□□ -0.89
COL4A6-201ENST00000334504 DEFA6Q01524 100 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 PPP1R3AQ16821 1122 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 ZNF792Q3KQV3 632 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 MSS51Q4VC12 460 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.48□□□□□ -0.89
COL4A6-201ENST00000334504 GLT8D1Q68CQ7 371 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 DNM1P34Q6PK57 102 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 IGFN1Q86VF2 1251 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 DDX1Q92499 740 aaKnown RBP9.48□□□□□ -0.89
COL4A6-201ENST00000334504 OR4K3Q96R72 315 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 MKRN2Q9H000 416 aaKnown RBP9.48□□□□□ -0.89
COL4A6-201ENST00000334504 AJAP1Q9UKB5 411 aaPredicted RBP9.48□□□□□ -0.89
COL4A6-201ENST00000334504 NPIPA5E9PKD4 350 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 NPPAP01160 153 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 CHRNB1P11230 501 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 CERS1P27544 350 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 GABRR2P28476 465 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 ATP4BP51164 291 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 ZNF648Q5T619 568 aaPredicted RBP9.48□□□□□ -0.89
COL4A6-201ENST00000334504 C3orf33Q6P1S2 294 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 OR13J1Q8NGT2 312 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 SLCO2A1Q92959 643 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 RBCK1Q9BYM8 510 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 SIX2Q9NPC8 291 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 NPIPA1Q9UND3 350 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 PCYT1BQ9Y5K3 369 aaPredicted RBP9.48□□□□□ -0.89
COL4A6-201ENST00000334504 CD163L1Q9NR16 1453 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 E9PCH4 1651 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 JUNP05412 331 aaKnown RBP9.48□□□□□ -0.89
COL4A6-201ENST00000334504 CSNK2A2P19784 350 aaPredicted RBP9.48□□□□□ -0.89
COL4A6-201ENST00000334504 CCKBRP32239 447 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 PCBP1Q15365 356 aaKnown RBP eCLIP9.48□□□□□ -0.89
COL4A6-201ENST00000334504 SHQ1Q6PI26 577 aaKnown RBP9.48□□□□□ -0.89
COL4A6-201ENST00000334504 SLC22A8Q8TCC7 542 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 ORAI3Q9BRQ5 295 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 CCM2LQ9NUG4 571 aaPredicted RBP9.48□□□□□ -0.89
COL4A6-201ENST00000334504 ZNF223Q9UK11 482 aaPredicted RBP9.48□□□□□ -0.89
COL4A6-201ENST00000334504 PCDHB14Q9Y5E9 798 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 IRS2Q9Y4H2 1338 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 SLIT1O75093 1534 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 A0A0G2JMP0 313 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 TTC24A2A3L6 582 aaPredicted RBP9.48□□□□□ -0.89
COL4A6-201ENST00000334504 SLC34A2O95436 690 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 C6orf47O95873 294 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 PSRC1Q6PGN9 363 aaPredicted RBP9.48□□□□□ -0.89
COL4A6-201ENST00000334504 FAM217AQ8IXS0 508 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 FIBCD1Q8N539 461 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 WDSUB1Q8N9V3 476 aa9.48□□□□□ -0.89
COL4A6-201ENST00000334504 OR4M2Q8NGB6 313 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms