RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 TMEM52Q8NDY8 209 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 TRPV3Q8NET8 790 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 OR9I1Q8NGQ6 314 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 ADAMTS14Q8WXS8 1223 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 UBE2E3Q969T4 207 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 REPS1Q96D71 796 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 QRFPRQ96P65 431 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 CHRNA10Q9GZZ6 450 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 ACTL8Q9H568 366 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 TEX10Q9NXF1 929 aaPredicted RBP15.66■□□□□ 0.1
SHOX-201ENST00000334060 HCN3Q9P1Z3 774 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 KLHL14Q9P2G3 628 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 KLK13Q9UKR3 277 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 TSC22D4Q9Y3Q8 395 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 ANKRD33BA6NCL7 494 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 FAM227AF5H4B4 570 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 LRATO95237 230 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 ALAS2P22557 587 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 ITGA1P56199 1179 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 RELAQ04206 551 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 TRA2AQ13595 282 aaKnown RBP eCLIP15.66■□□□□ 0.1
SHOX-201ENST00000334060 PWP1Q13610 501 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 UBAP2LQ14157 1087 aaKnown RBP15.66■□□□□ 0.1
SHOX-201ENST00000334060 ERV3-1Q14264 604 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 IL23RQ5VWK5 629 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 ANKRD26P1Q6NSI1 321 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 CARFQ8N187 725 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 METTL4Q8N3J2 472 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 OR2L5Q8NG80 312 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 CDC26Q8NHZ8 85 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 DEPDC7Q96QD5 511 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 DPYSL5Q9BPU6 564 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 BRF2Q9HAW0 419 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 TCF7L2Q9NQB0 619 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 CUTCQ9NTM9 273 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 SLC39A1Q9NY26 324 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 EXO1Q9UQ84 846 aaKnown RBP15.66■□□□□ 0.1
SHOX-201ENST00000334060 FITM1A5D6W6 292 aa15.65■□□□□ 0.1
SHOX-201ENST00000334060 SRPX2O60687 465 aaPredicted RBP15.65■□□□□ 0.1
SHOX-201ENST00000334060 SCRG1O75711 98 aa15.65■□□□□ 0.1
SHOX-201ENST00000334060 G6PDP11413 515 aa15.65■□□□□ 0.1
SHOX-201ENST00000334060 SDC1P18827 310 aa15.65■□□□□ 0.1
SHOX-201ENST00000334060 PTX3P26022 381 aaPredicted RBP15.65■□□□□ 0.1
SHOX-201ENST00000334060 PTGER1P34995 402 aa15.65■□□□□ 0.1
SHOX-201ENST00000334060 ARFIP2P53365 341 aa15.65■□□□□ 0.1
SHOX-201ENST00000334060 MC2RQ01718 297 aa15.65■□□□□ 0.1
SHOX-201ENST00000334060 FOXC1Q12948 553 aa15.65■□□□□ 0.1
SHOX-201ENST00000334060 TMTC4Q5T4D3 741 aa15.65■□□□□ 0.1
SHOX-201ENST00000334060 TMEM126BQ8IUX1 230 aa15.65■□□□□ 0.1
SHOX-201ENST00000334060 AFAP1L2Q8N4X5 818 aa15.65■□□□□ 0.1
SHOX-201ENST00000334060 KRTCAP2Q8N6L1 136 aa15.65■□□□□ 0.1
SHOX-201ENST00000334060 CAMKVQ8NCB2 501 aa15.65■□□□□ 0.1
SHOX-201ENST00000334060 LIN37Q96GY3 246 aaPredicted RBP15.65■□□□□ 0.1
SHOX-201ENST00000334060 TSSK3Q96PN8 268 aa15.65■□□□□ 0.1
SHOX-201ENST00000334060 CMKLR1Q99788 373 aa15.65■□□□□ 0.1
SHOX-201ENST00000334060 MAPKAP1Q9BPZ7 522 aa15.65■□□□□ 0.1
SHOX-201ENST00000334060 PITHD1Q9GZP4 211 aaPredicted RBP15.65■□□□□ 0.1
SHOX-201ENST00000334060 C1orf109Q9NX04 203 aa15.65■□□□□ 0.1
SHOX-201ENST00000334060 ARMCX1Q9P291 453 aa15.65■□□□□ 0.1
SHOX-201ENST00000334060 VTI1BQ9UEU0 232 aa15.65■□□□□ 0.1
SHOX-201ENST00000334060 NDOR1Q9UHB4 597 aa15.65■□□□□ 0.1
SHOX-201ENST00000334060 RARRES3Q9UL19 164 aa15.65■□□□□ 0.1
SHOX-201ENST00000334060 SDK2Q58EX2 2172 aa15.64■□□□□ 0.09
SHOX-201ENST00000334060 SERTM1A2A2V5 107 aa15.64■□□□□ 0.09
SHOX-201ENST00000334060 GLOD5A6NK44 160 aa15.64■□□□□ 0.09
SHOX-201ENST00000334060 SLC28A1O00337 649 aa15.64■□□□□ 0.09
SHOX-201ENST00000334060 PLD2O14939 933 aa15.64■□□□□ 0.09
SHOX-201ENST00000334060 POLR1CO15160 346 aaPredicted RBP15.64■□□□□ 0.09
SHOX-201ENST00000334060 RGS14O43566 566 aa15.64■□□□□ 0.09
SHOX-201ENST00000334060 TROVE2P10155 538 aaKnown RBP eCLIP15.64■□□□□ 0.09
SHOX-201ENST00000334060 ALOX12P18054 663 aa15.64■□□□□ 0.09
SHOX-201ENST00000334060 ATP5A1P25705 553 aaKnown RBP15.64■□□□□ 0.09
SHOX-201ENST00000334060 SSR2P43308 183 aa15.64■□□□□ 0.09
SHOX-201ENST00000334060 RAP1GDS1P52306 607 aa15.64■□□□□ 0.09
SHOX-201ENST00000334060 RGS1Q08116 209 aa15.64■□□□□ 0.09
SHOX-201ENST00000334060 CUL3Q13618 768 aa15.64■□□□□ 0.09
SHOX-201ENST00000334060 CLPPQ16740 277 aaPredicted RBP15.64■□□□□ 0.09
SHOX-201ENST00000334060 ATP6AP1LQ52LC2 224 aa15.64■□□□□ 0.09
SHOX-201ENST00000334060 C18orf63Q68DL7 685 aa15.64■□□□□ 0.09
SHOX-201ENST00000334060 NOXRED1Q6NXP6 359 aa15.64■□□□□ 0.09
SHOX-201ENST00000334060 ZFAND4Q86XD8 727 aa15.64■□□□□ 0.09
SHOX-201ENST00000334060 LIX1Q8N485 282 aa15.64■□□□□ 0.09
SHOX-201ENST00000334060 GBP7Q8N8V2 638 aaPredicted RBP15.64■□□□□ 0.09
SHOX-201ENST00000334060 ACOT4Q8N9L9 421 aa15.64■□□□□ 0.09
SHOX-201ENST00000334060 RTKNQ9BST9 563 aa15.64■□□□□ 0.09
SHOX-201ENST00000334060 NMUR2Q9GZQ4 415 aa15.64■□□□□ 0.09
SHOX-201ENST00000334060 FBXW2Q9UKT8 454 aa15.64■□□□□ 0.09
SHOX-201ENST00000334060 ATG4BQ9Y4P1 393 aa15.64■□□□□ 0.09
SHOX-201ENST00000334060 A0A0A6YYD5 115 aa15.64■□□□□ 0.09
SHOX-201ENST00000334060 GALR3O60755 368 aaPredicted RBP15.64■□□□□ 0.09
SHOX-201ENST00000334060 CNOT3O75175 753 aaKnown RBP15.64■□□□□ 0.09
SHOX-201ENST00000334060 CDC123O75794 336 aaPredicted RBP15.64■□□□□ 0.09
SHOX-201ENST00000334060 ATP6V1G2O95670 118 aa15.64■□□□□ 0.09
SHOX-201ENST00000334060 BCKDHAP12694 445 aa15.64■□□□□ 0.09
SHOX-201ENST00000334060 IL12AP29459 219 aa15.64■□□□□ 0.09
SHOX-201ENST00000334060 ACY1Q03154 408 aa15.64■□□□□ 0.09
SHOX-201ENST00000334060 NAA25Q14CX7 972 aa15.64■□□□□ 0.09
SHOX-201ENST00000334060 OR4C11Q6IEV9 310 aa15.64■□□□□ 0.09
SHOX-201ENST00000334060 SHISA6Q6ZSJ9 500 aa15.64■□□□□ 0.09
SHOX-201ENST00000334060 TIPARPQ7Z3E1 657 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms