RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 KCNJ16Q9NPI9 418 aa10.02□□□□□ -0.8
SPTBN1-201ENST00000333896 TMPRSS4Q9NRS4 437 aa10.02□□□□□ -0.8
SPTBN1-201ENST00000333896 ZNF223Q9UK11 482 aaPredicted RBP10.02□□□□□ -0.8
SPTBN1-201ENST00000333896 POMT1Q9Y6A1 747 aa10.02□□□□□ -0.8
SPTBN1-201ENST00000333896 PLGP00747 810 aaPredicted RBP10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 MARCKSL1P49006 195 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 HTD2P86397 168 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 GPR19Q15760 415 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 BCL2L15Q5TBC7 163 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 PRSS55Q6UWB4 352 aaPredicted RBP10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 SUN3Q8TAQ9 357 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 SLC6A7Q99884 636 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 MAN2C1Q9NTJ4 1040 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 ERVK13-1Q9NX77 482 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 SIRPGQ9P1W8 387 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 ERCC6L2Q5T890 1561 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 TMEM94Q12767 1356 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 CLCN4P51793 760 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 REEP5Q00765 189 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 TCEANCQ8N8B7 351 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 FBXL20Q96IG2 436 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 MEPEQ9NQ76 525 aaPredicted RBP10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 C14orf119Q9NWQ9 140 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 SALL3Q9BXA9 1300 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 KHNYNO15037 678 aaKnown RBP10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 KIAA0513O60268 411 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 BEST1O76090 585 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 ADRB1P08588 477 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 ZNF136P52737 540 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 PAN3Q58A45 887 aaKnown RBP10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 FSTL4Q6MZW2 842 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 TMPRSS9Q7Z410 1059 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 METTL21AQ8WXB1 218 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 ADAD1Q96M93 576 aaKnown RBP10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 TSSK3Q96PN8 268 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 OR2S2Q9NQN1 319 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 ARFGEF2Q9Y6D5 1785 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 RFXAPO00287 272 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 LYRM1O43325 122 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 MT-ND5P03915 603 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 IFNGR1P15260 489 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 HDCP19113 662 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 HTR1BP28222 390 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 DDOSTP39656 456 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 GBE1Q04446 702 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 LAPTM5Q13571 262 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 CFAP77Q6ZQR2 320 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 BTBD2Q9BX70 525 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 TMEM39AQ9NV64 488 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 WDR45Q9Y484 360 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 LALBAP00709 142 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 ZNF286BP0CG31 522 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 CXCR4P61073 352 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 GAREM2Q75VX8 874 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 OR8J3Q8NGG0 315 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 SHC3Q92529 594 aa10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 EMID1Q96A84 441 aaPredicted RBP10.02□□□□□ -0.81
SPTBN1-201ENST00000333896 A0A0A6YYH2 397 aa10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 A6NJ64 397 aa10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 CACNB4O00305 520 aaPredicted RBP10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 PPP1R2P9O14990 202 aa10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 CXCL8P10145 99 aa10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 NR4A2P43354 598 aa10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 DPY19L4Q7Z388 723 aa10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 SGK3Q96BR1 496 aa10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 EBPLQ9BY08 206 aa10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 PCDHAC1Q9H158 963 aa10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 ACSS2Q9NR19 701 aa10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 ASF1BQ9NVP2 202 aa10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 ADGRB1O14514 1584 aa10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 IMPA2O14732 288 aa10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 SLC25A14O95258 325 aaPredicted RBP10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 FABP1P07148 127 aa10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 TGFB2P61812 414 aa10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 CAP1Q01518 475 aa10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 GTF2H2Q13888 395 aa10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 C9orf131Q5VYM1 1079 aa10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 GTF2H2CQ6P1K8 395 aa10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 OR2T11Q8NH01 316 aa10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 LHPPQ9H008 270 aa10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 ZFR2Q9UPR6 939 aaKnown RBP10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 RNF212BA8MTL3 300 aa10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 TLR4O00206 839 aa10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 FFAR2O15552 330 aa10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 SCNN1GP51170 649 aa10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 NTRK2Q16620 822 aa10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 FAM171A1Q5VUB5 890 aa10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 BLOC1S3Q6QNY0 202 aa10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 TIFABQ6ZNK6 161 aa10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 SLC7A13Q8TCU3 470 aa10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 TIMM29Q9BSF4 260 aa10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 UGT2A1Q9Y4X1 527 aa10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 TULP4Q9NRJ4 1543 aa10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 TNFSF12O43508 249 aa10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 CYTIPO60759 359 aa10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 CLDN9O95484 217 aa10.01□□□□□ -0.81
SPTBN1-201ENST00000333896 POLR2HP52434 150 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms