RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 SORBS1Q9BX66 1292 aaKnown RBP24.58■■□□□ 1.52
SMDT1-201ENST00000331479 ZDHHC2Q9UIJ5 367 aa24.58■■□□□ 1.52
SMDT1-201ENST00000331479 PLPP1O14494 284 aa24.57■■□□□ 1.52
SMDT1-201ENST00000331479 EFSO43281 561 aa24.57■■□□□ 1.52
SMDT1-201ENST00000331479 RAB40ALP0C0E4 278 aa24.57■■□□□ 1.52
SMDT1-201ENST00000331479 PIM1P11309 404 aaPredicted RBP24.57■■□□□ 1.52
SMDT1-201ENST00000331479 NR1D1P20393 614 aa24.57■■□□□ 1.52
SMDT1-201ENST00000331479 ITPKBP27987 946 aa24.57■■□□□ 1.52
SMDT1-201ENST00000331479 SLC1A6P48664 564 aa24.57■■□□□ 1.52
SMDT1-201ENST00000331479 STX3Q13277 289 aa24.57■■□□□ 1.52
SMDT1-201ENST00000331479 CUL3Q13618 768 aa24.57■■□□□ 1.52
SMDT1-201ENST00000331479 SH2D4BQ5SQS7 431 aa24.57■■□□□ 1.52
SMDT1-201ENST00000331479 ZNF793Q6ZN11 406 aa24.57■■□□□ 1.52
SMDT1-201ENST00000331479 KIAA1143Q96AT1 154 aaPredicted RBP24.57■■□□□ 1.52
SMDT1-201ENST00000331479 FAR2Q96K12 515 aa24.57■■□□□ 1.52
SMDT1-201ENST00000331479 KCNC2Q96PR1 638 aa24.57■■□□□ 1.52
SMDT1-201ENST00000331479 YIPF2Q9BWQ6 316 aa24.57■■□□□ 1.52
SMDT1-201ENST00000331479 BRF2Q9HAW0 419 aa24.57■■□□□ 1.52
SMDT1-201ENST00000331479 TRPC4Q9UBN4 977 aa24.57■■□□□ 1.52
SMDT1-201ENST00000331479 GPN3Q9UHW5 284 aaPredicted RBP24.57■■□□□ 1.52
SMDT1-201ENST00000331479 FARSAQ9Y285 508 aaKnown RBP24.57■■□□□ 1.52
SMDT1-201ENST00000331479 TRAF6Q9Y4K3 522 aa24.57■■□□□ 1.52
SMDT1-201ENST00000331479 MAP4K5Q9Y4K4 846 aa24.57■■□□□ 1.52
SMDT1-201ENST00000331479 ZZEF1O43149 2961 aa24.56■■□□□ 1.52
SMDT1-201ENST00000331479 CCDC88CQ9P219 2028 aa24.56■■□□□ 1.52
SMDT1-201ENST00000331479 HSPA4LO95757 839 aa24.56■■□□□ 1.52
SMDT1-201ENST00000331479 FGF4P08620 206 aa24.56■■□□□ 1.52
SMDT1-201ENST00000331479 TLE3Q04726 772 aa24.56■■□□□ 1.52
SMDT1-201ENST00000331479 KANK2Q63ZY3 851 aa24.56■■□□□ 1.52
SMDT1-201ENST00000331479 FKBP10Q96AY3 582 aa24.56■■□□□ 1.52
SMDT1-201ENST00000331479 CCNL2Q96S94 520 aaPredicted RBP24.56■■□□□ 1.52
SMDT1-201ENST00000331479 SORT1Q99523 831 aa24.56■■□□□ 1.52
SMDT1-201ENST00000331479 SERPINI1Q99574 410 aa24.56■■□□□ 1.52
SMDT1-201ENST00000331479 GPR87Q9BY21 358 aa24.56■■□□□ 1.52
SMDT1-201ENST00000331479 ZNF717Q9BY31 904 aaPredicted RBP24.56■■□□□ 1.52
SMDT1-201ENST00000331479 MED4Q9NPJ6 270 aa24.56■■□□□ 1.52
SMDT1-201ENST00000331479 ZMIZ1Q9ULJ6 1067 aa24.56■■□□□ 1.52
SMDT1-201ENST00000331479 SLC12A4Q9UP95 1085 aa24.56■■□□□ 1.52
SMDT1-201ENST00000331479 A0A087WV48 116 aa24.55■■□□□ 1.52
SMDT1-201ENST00000331479 KLF7O75840 302 aaPredicted RBP24.55■■□□□ 1.52
SMDT1-201ENST00000331479 ALBP02768 609 aa24.55■■□□□ 1.52
SMDT1-201ENST00000331479 CERS1P27544 350 aa24.55■■□□□ 1.52
SMDT1-201ENST00000331479 PTPN4P29074 926 aa24.55■■□□□ 1.52
SMDT1-201ENST00000331479 RPS15P62841 145 aaKnown RBP24.55■■□□□ 1.52
SMDT1-201ENST00000331479 TGM3Q08188 693 aa24.55■■□□□ 1.52
SMDT1-201ENST00000331479 NKG7Q16617 165 aa24.55■■□□□ 1.52
SMDT1-201ENST00000331479 HSP90B2PQ58FF3 399 aa24.55■■□□□ 1.52
SMDT1-201ENST00000331479 VWA2Q5GFL6 755 aa24.55■■□□□ 1.52
SMDT1-201ENST00000331479 SRFBP1Q8NEF9 429 aaKnown RBP24.55■■□□□ 1.52
SMDT1-201ENST00000331479 OR51Q1Q8NH59 317 aa24.55■■□□□ 1.52
SMDT1-201ENST00000331479 RGMAQ96B86 450 aa24.55■■□□□ 1.52
SMDT1-201ENST00000331479 TBCDQ9BTW9 1192 aa24.55■■□□□ 1.52
SMDT1-201ENST00000331479 ACPTQ9BZG2 426 aa24.55■■□□□ 1.52
SMDT1-201ENST00000331479 SLC26A1Q9H2B4 701 aa24.55■■□□□ 1.52
SMDT1-201ENST00000331479 ACTL8Q9H568 366 aa24.55■■□□□ 1.52
SMDT1-201ENST00000331479 ZNF282Q9UDV7 671 aaPredicted RBP24.55■■□□□ 1.52
SMDT1-201ENST00000331479 PCDHGA6Q9Y5G7 932 aa24.55■■□□□ 1.52
SMDT1-201ENST00000331479 DNAJC15Q9Y5T4 150 aa24.55■■□□□ 1.52
SMDT1-201ENST00000331479 PTGDR2Q9Y5Y4 395 aa24.55■■□□□ 1.52
SMDT1-201ENST00000331479 TPRP12270 2363 aaKnown RBP24.55■■□□□ 1.52
SMDT1-201ENST00000331479 IGLV3-12A0A075B6K2 115 aa24.54■■□□□ 1.52
SMDT1-201ENST00000331479 RAP1GDS1P52306 607 aa24.54■■□□□ 1.52
SMDT1-201ENST00000331479 HMGCS1Q01581 520 aa24.54■■□□□ 1.52
SMDT1-201ENST00000331479 RUNX2Q13950 521 aa24.54■■□□□ 1.52
SMDT1-201ENST00000331479 UGT3A2Q3SY77 523 aa24.54■■□□□ 1.52
SMDT1-201ENST00000331479 OR4C11Q6IEV9 310 aa24.54■■□□□ 1.52
SMDT1-201ENST00000331479 NIPAL1Q6NVV3 410 aa24.54■■□□□ 1.52
SMDT1-201ENST00000331479 LRRC69Q6ZNQ3 347 aa24.54■■□□□ 1.52
SMDT1-201ENST00000331479 SHISA6Q6ZSJ9 500 aa24.54■■□□□ 1.52
SMDT1-201ENST00000331479 CLYBLQ8N0X4 340 aa24.54■■□□□ 1.52
SMDT1-201ENST00000331479 ZNF781Q8N8C0 355 aa24.54■■□□□ 1.52
SMDT1-201ENST00000331479 STT3BQ8TCJ2 826 aa24.54■■□□□ 1.52
SMDT1-201ENST00000331479 CENPKQ9BS16 269 aa24.54■■□□□ 1.52
SMDT1-201ENST00000331479 MRPL1Q9BYD6 325 aaKnown RBP24.54■■□□□ 1.52
SMDT1-201ENST00000331479 MANSC1Q9H8J5 431 aa24.54■■□□□ 1.52
SMDT1-201ENST00000331479 KCND3Q9UK17 655 aa24.54■■□□□ 1.52
SMDT1-201ENST00000331479 ANKRD11Q6UB99 2663 aaPredicted RBP24.54■■□□□ 1.52
SMDT1-201ENST00000331479 VSTM2BA6NLU5 285 aa24.54■■□□□ 1.52
SMDT1-201ENST00000331479 CHST10O43529 356 aa24.54■■□□□ 1.52
SMDT1-201ENST00000331479 ATP5A1P25705 553 aaKnown RBP24.54■■□□□ 1.52
SMDT1-201ENST00000331479 MTTPP55157 894 aa24.54■■□□□ 1.52
SMDT1-201ENST00000331479 SKP1P63208 163 aa24.54■■□□□ 1.52
SMDT1-201ENST00000331479 ZNF33BQ06732 778 aa24.54■■□□□ 1.52
SMDT1-201ENST00000331479 CSTF3Q12996 717 aaKnown RBP24.54■■□□□ 1.52
SMDT1-201ENST00000331479 ACOT4Q8N9L9 421 aa24.54■■□□□ 1.52
SMDT1-201ENST00000331479 SERINC2Q96SA4 455 aa24.54■■□□□ 1.52
SMDT1-201ENST00000331479 SPSB2Q99619 263 aa24.54■■□□□ 1.52
SMDT1-201ENST00000331479 TUBB1Q9H4B7 451 aa24.54■■□□□ 1.52
SMDT1-201ENST00000331479 COPS7BQ9H9Q2 264 aaPredicted RBP24.54■■□□□ 1.52
SMDT1-201ENST00000331479 INTS9Q9NV88 658 aaKnown RBP24.54■■□□□ 1.52
SMDT1-201ENST00000331479 TCFL5Q9UL49 500 aa24.54■■□□□ 1.52
SMDT1-201ENST00000331479 LOC400499M0QZD8 3231 aa24.53■■□□□ 1.52
SMDT1-201ENST00000331479 SERTM1A2A2V5 107 aa24.53■■□□□ 1.52
SMDT1-201ENST00000331479 JRKO75564 520 aa24.53■■□□□ 1.52
SMDT1-201ENST00000331479 ZGLP1P0C6A0 271 aa24.53■■□□□ 1.52
SMDT1-201ENST00000331479 HSD3B1P14060 373 aa24.53■■□□□ 1.52
SMDT1-201ENST00000331479 HIST1H1TP22492 207 aaPredicted RBP24.53■■□□□ 1.52
SMDT1-201ENST00000331479 HSD3B2P26439 372 aa24.53■■□□□ 1.52
SMDT1-201ENST00000331479 BSGP35613 385 aa24.53■■□□□ 1.52
SMDT1-201ENST00000331479 SSR2P43308 183 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms