RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 C19orf47Q8N9M1 422 aaKnown RBP9.07□□□□□ -0.96
C11orf54-201ENST00000331239 CAMKVQ8NCB2 501 aa9.07□□□□□ -0.96
C11orf54-201ENST00000331239 TM4SF19Q96DZ7 209 aa9.07□□□□□ -0.96
C11orf54-201ENST00000331239 DUS3LQ96G46 650 aaKnown RBP9.07□□□□□ -0.96
C11orf54-201ENST00000331239 ZFYVE21Q9BQ24 234 aa9.07□□□□□ -0.96
C11orf54-201ENST00000331239 CCDC3Q9BQI4 270 aa9.07□□□□□ -0.96
C11orf54-201ENST00000331239 EFHD1Q9BUP0 239 aa9.07□□□□□ -0.96
C11orf54-201ENST00000331239 MRPS26Q9BYN8 205 aaKnown RBP9.07□□□□□ -0.96
C11orf54-201ENST00000331239 AKTIPQ9H8T0 292 aa9.07□□□□□ -0.96
C11orf54-201ENST00000331239 SLC6A20Q9NP91 592 aa9.07□□□□□ -0.96
C11orf54-201ENST00000331239 PARD6AQ9NPB6 346 aa9.07□□□□□ -0.96
C11orf54-201ENST00000331239 ZNF490Q9ULM2 529 aaPredicted RBP9.07□□□□□ -0.96
C11orf54-201ENST00000331239 PLCL2Q9UPR0 1127 aa9.07□□□□□ -0.96
C11orf54-201ENST00000331239 PCDHGA4Q9Y5G9 962 aa9.07□□□□□ -0.96
C11orf54-201ENST00000331239 FRYLO94915 3013 aa9.07□□□□□ -0.96
C11orf54-201ENST00000331239 IGKV1-8A0A0C4DH67 115 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 PRAMEF33A0A0G2JMD5 474 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 H0YJX3 145 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 PIP5K1BO14986 540 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 PRAMEF4O60810 478 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 DKK1O94907 266 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 FAM58BPP0C7Q3 252 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 ZNF26P17031 533 aaPredicted RBP9.06□□□□□ -0.96
C11orf54-201ENST00000331239 DDX5P17844 614 aaKnown RBP9.06□□□□□ -0.96
C11orf54-201ENST00000331239 CDH3P22223 829 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 OR1D5P58170 312 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 STXBP1P61764 594 aaKnown RBP9.06□□□□□ -0.96
C11orf54-201ENST00000331239 HSD11B2P80365 405 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 MYBPC1Q00872 1141 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 SPIN4Q56A73 249 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 STPG1Q5TH74 334 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 PRAMEF9Q5VWM5 478 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 TCEAL6Q6IPX3 200 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 GALNT18Q6P9A2 607 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 CYP2R1Q6VVX0 501 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 ARHGAP22Q7Z5H3 698 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 DNAJC22Q8N4W6 341 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 SELENOMQ8WWX9 145 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 TCEAL3Q969E4 200 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 FCRL1Q96LA6 429 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 SLC39A3Q9BRY0 314 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 PDE7BQ9NP56 450 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 PCDHGB4Q9UN71 923 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 CCL27Q9Y4X3 112 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 PCDHGB5Q9Y5G0 923 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 H7BY64 318 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 ETS2P15036 469 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 CD22P20273 847 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 ZNF10P21506 573 aaPredicted RBP9.06□□□□□ -0.96
C11orf54-201ENST00000331239 ALDH4A1P30038 563 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 CCKBRP32239 447 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 TRA2BP62995 288 aaKnown RBP9.06□□□□□ -0.96
C11orf54-201ENST00000331239 EMX2Q04743 252 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 RGS1Q08116 209 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 DYNC1I2Q13409 638 aaKnown RBP9.06□□□□□ -0.96
C11orf54-201ENST00000331239 GK3PQ14409 553 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 MTX3Q5HYI7 312 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 CATSPEREQ5SY80 951 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 IRAK1BP1Q5VVH5 260 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 FCRL6Q6DN72 434 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 PRMT9Q6P2P2 845 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 GUSBP11Q6P575 273 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 ISLR2Q6UXK2 745 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 RETREG3Q86VR2 466 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 DHFR2Q86XF0 187 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 CHERPQ8IWX8 916 aaKnown RBP9.06□□□□□ -0.96
C11orf54-201ENST00000331239 DDIASQ8IXT1 998 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 MIER2Q8N344 545 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 LRTOMTQ8WZ04 291 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 ZNF597Q96LX8 424 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 PRAP1Q96NZ9 151 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 GFM1Q96RP9 751 aaKnown RBP9.06□□□□□ -0.96
C11orf54-201ENST00000331239 FSCN3Q9NQT6 498 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 VPS29Q9UBQ0 182 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 PTGDR2Q9Y5Y4 395 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 OTOGLQ3ZCN5 2332 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 USP34Q70CQ2 3546 aa9.06□□□□□ -0.96
C11orf54-201ENST00000331239 SDK1Q7Z5N4 2213 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 CPED1A4D0V7 1026 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 FITM1A5D6W6 292 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 PPP6CO00743 305 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 ANGPT2O15123 496 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 OR6B1O95007 311 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 TFAP2AP05549 437 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 LBPP18428 481 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 NELFEP18615 380 aaKnown RBP9.05□□□□□ -0.96
C11orf54-201ENST00000331239 ARL1P40616 181 aaPredicted RBP9.05□□□□□ -0.96
C11orf54-201ENST00000331239 FOXA1P55317 472 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 NHLH1Q02575 133 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 ACY1Q03154 408 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 ZFP36L1Q07352 338 aaKnown RBP9.05□□□□□ -0.96
C11orf54-201ENST00000331239 TSTA3Q13630 321 aaPredicted RBP9.05□□□□□ -0.96
C11orf54-201ENST00000331239 APOFQ13790 326 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 CPSF6Q16630 551 aaKnown RBP eCLIP9.05□□□□□ -0.96
C11orf54-201ENST00000331239 DEPDC1Q5TB30 811 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 FBXO42Q6P3S6 717 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 PAGE2Q7Z2X7 111 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 ZFAND4Q86XD8 727 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 CREB3L4Q8TEY5 395 aa9.05□□□□□ -0.96
C11orf54-201ENST00000331239 STARD8Q92502 1023 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms